BLASTX nr result

ID: Chrysanthemum21_contig00038303 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038303
         (643 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY71602.1| hypothetical protein LSAT_2X45481 [Lactuca sativa]      62   3e-09
gb|PLY71626.1| hypothetical protein LSAT_9X87941 [Lactuca sativa]      56   7e-06

>gb|PLY71602.1| hypothetical protein LSAT_2X45481 [Lactuca sativa]
          Length = 80

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 39/80 (48%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +3

Query: 240 MAGVTSKKXXXXXXXXXXXXXXXQALETSHLTPLRRFLKHSSLDKXXXXXXXXXXXS--H 413
           MA V  KK                 LETS LT  RR LKHS   K           +  H
Sbjct: 1   MADVIKKKLLLFFGLLLVVPLVVYPLETSCLTSGRRLLKHSQPPKTTMATTIATTGATTH 60

Query: 414 AEFHAAAHEVPSGPNPESNR 473
           AEFHAAAHEVPSGPNPESNR
Sbjct: 61  AEFHAAAHEVPSGPNPESNR 80


>gb|PLY71626.1| hypothetical protein LSAT_9X87941 [Lactuca sativa]
          Length = 270

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 36/81 (44%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +3

Query: 237 FMAGVTSKKXXXXXXXXXXXXXXXQALETSHLTPLRRFLKHSSLDKXXXXXXXXXXXS-- 410
           FMA V SKK                 LET  L   RR LKHS   K           +  
Sbjct: 190 FMADVISKKLLLFFGLLLVVPLIVYPLETDCLISERRLLKHSQPPKTTMATTIATTGATT 249

Query: 411 HAEFHAAAHEVPSGPNPESNR 473
           H EF  AAHEVPSGPNPESNR
Sbjct: 250 HVEFRVAAHEVPSGPNPESNR 270


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