BLASTX nr result

ID: Chrysanthemum21_contig00038210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00038210
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93129.1| Nucleotide-binding, alpha-beta plait [Cynara card...    80   1e-14

>gb|KVH93129.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 455

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 59/137 (43%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
 Frame = -2

Query: 399 SALVQGSGDGVRPEV--VNSNQQSSMQGSFASQFXXXXXXXXXXXXXXXXXXXXXXXXXX 226
           SA VQGSGD V+PEV  VN NQQSSMQGS+ASQF                          
Sbjct: 269 SAQVQGSGDRVKPEVIRVNLNQQSSMQGSYASQFGGGPGGIYGGNLGGLGLAGPGGISVY 328

Query: 225 XXGYGVLGKGPPLGHSQYPLNLXXXXXXXXXXXXSNAGRMGLSTSGGLQPSSLRVDGGGF 46
               G  G+ PPL HSQ+PLN             SN G  GLST+G   P+SL    GGF
Sbjct: 329 G---GGGGQVPPLSHSQHPLNSNLGGGAGLSSFGSNGGGPGLSTNGSQAPNSLGGGSGGF 385

Query: 45  SG--DSHLSGPGASYGG 1
           S        G G SYGG
Sbjct: 386 SSGLGGGGGGVGVSYGG 402


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