BLASTX nr result
ID: Chrysanthemum21_contig00038207
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00038207
(403 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH89578.1| G-protein beta WD-40 repeat-containing protein [C... 154 5e-41
gb|OTG29755.1| putative guanine nucleotide-binding protein, beta... 141 2e-36
ref|XP_022036193.1| katanin p80 WD40 repeat-containing subunit B... 141 2e-36
ref|XP_022036192.1| katanin p80 WD40 repeat-containing subunit B... 141 2e-36
ref|XP_022036191.1| katanin p80 WD40 repeat-containing subunit B... 141 2e-36
gb|PLY98809.1| hypothetical protein LSAT_7X19941 [Lactuca sativa] 120 6e-29
ref|XP_023758258.1| katanin p80 WD40 repeat-containing subunit B... 120 6e-29
ref|XP_023758251.1| katanin p80 WD40 repeat-containing subunit B... 120 6e-29
gb|KVH96988.1| G-protein beta WD-40 repeat-containing protein [C... 116 1e-27
ref|XP_023770843.1| katanin p80 WD40 repeat-containing subunit B... 79 2e-14
ref|XP_023770834.1| katanin p80 WD40 repeat-containing subunit B... 79 2e-14
gb|KVH96987.1| hypothetical protein Ccrd_000918, partial [Cynara... 58 3e-07
>gb|KVH89578.1| G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 802
Score = 154 bits (390), Expect = 5e-41
Identities = 85/145 (58%), Positives = 96/145 (66%), Gaps = 11/145 (7%)
Frame = -2
Query: 402 TAAKLPRIVHKPDS-----------SPVSVVQRPRTAPSVVAPEKGKASPMAXXXXXXXX 256
T AK V KPDS SP V+QRPRTAPS++ PEKGKASPM
Sbjct: 517 TEAKSSSTVQKPDSGPNIKSEEANSSPALVIQRPRTAPSML-PEKGKASPMQRSASTRRL 575
Query: 255 XXXXXXXXPMLVTRRSNASPRVMPERTKISPMVAVPRHETPKRMVTEKAKSSPLLDDCPQ 76
PM+V RRS AS R++PERTK SPM+ V RH+TP RM+ EKAKSSPLLDD PQ
Sbjct: 576 FPDKVRSSPMMVARRSTASSRIIPERTKTSPMLVVQRHDTPNRMIPEKAKSSPLLDDSPQ 635
Query: 75 TTGRGFTSKKDDDVAEHLMLNHDVF 1
TTGRG TSKK+DDVA+ LMLNHD F
Sbjct: 636 TTGRGLTSKKEDDVADELMLNHDAF 660
>gb|OTG29755.1| putative guanine nucleotide-binding protein, beta subunit [Helianthus
annuus]
Length = 942
Score = 141 bits (356), Expect = 2e-36
Identities = 80/140 (57%), Positives = 92/140 (65%), Gaps = 8/140 (5%)
Frame = -2
Query: 396 AKLPRIVHKPDSSPV-------SVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXX 238
AK ++ KPD P S RPRTAPS++ PEKGK SPM
Sbjct: 647 AKSSPMITKPDVGPNIKSEEANSPPVRPRTAPSMLLPEKGKVSPMQRSVNSRRVMQERVR 706
Query: 237 XXPMLVTRRSNASPRVMPERT-KISPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRG 61
PMLVTRRSNASPR++PERT K SP+V PRH+TP RM+ +KAKSSP LDD PQTTGRG
Sbjct: 707 PSPMLVTRRSNASPRMIPERTTKTSPVVVGPRHDTPSRMMLQKAKSSPSLDDGPQTTGRG 766
Query: 60 FTSKKDDDVAEHLMLNHDVF 1
SKKDDDVA+ L+ NHDVF
Sbjct: 767 LMSKKDDDVADDLLQNHDVF 786
>ref|XP_022036193.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X3
[Helianthus annuus]
Length = 944
Score = 141 bits (356), Expect = 2e-36
Identities = 80/140 (57%), Positives = 92/140 (65%), Gaps = 8/140 (5%)
Frame = -2
Query: 396 AKLPRIVHKPDSSPV-------SVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXX 238
AK ++ KPD P S RPRTAPS++ PEKGK SPM
Sbjct: 649 AKSSPMITKPDVGPNIKSEEANSPPVRPRTAPSMLLPEKGKVSPMQRSVNSRRVMQERVR 708
Query: 237 XXPMLVTRRSNASPRVMPERT-KISPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRG 61
PMLVTRRSNASPR++PERT K SP+V PRH+TP RM+ +KAKSSP LDD PQTTGRG
Sbjct: 709 PSPMLVTRRSNASPRMIPERTTKTSPVVVGPRHDTPSRMMLQKAKSSPSLDDGPQTTGRG 768
Query: 60 FTSKKDDDVAEHLMLNHDVF 1
SKKDDDVA+ L+ NHDVF
Sbjct: 769 LMSKKDDDVADDLLQNHDVF 788
>ref|XP_022036192.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2
[Helianthus annuus]
Length = 947
Score = 141 bits (356), Expect = 2e-36
Identities = 80/140 (57%), Positives = 92/140 (65%), Gaps = 8/140 (5%)
Frame = -2
Query: 396 AKLPRIVHKPDSSPV-------SVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXX 238
AK ++ KPD P S RPRTAPS++ PEKGK SPM
Sbjct: 647 AKSSPMITKPDVGPNIKSEEANSPPVRPRTAPSMLLPEKGKVSPMQRSVNSRRVMQERVR 706
Query: 237 XXPMLVTRRSNASPRVMPERT-KISPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRG 61
PMLVTRRSNASPR++PERT K SP+V PRH+TP RM+ +KAKSSP LDD PQTTGRG
Sbjct: 707 PSPMLVTRRSNASPRMIPERTTKTSPVVVGPRHDTPSRMMLQKAKSSPSLDDGPQTTGRG 766
Query: 60 FTSKKDDDVAEHLMLNHDVF 1
SKKDDDVA+ L+ NHDVF
Sbjct: 767 LMSKKDDDVADDLLQNHDVF 786
>ref|XP_022036191.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
[Helianthus annuus]
Length = 949
Score = 141 bits (356), Expect = 2e-36
Identities = 80/140 (57%), Positives = 92/140 (65%), Gaps = 8/140 (5%)
Frame = -2
Query: 396 AKLPRIVHKPDSSPV-------SVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXX 238
AK ++ KPD P S RPRTAPS++ PEKGK SPM
Sbjct: 649 AKSSPMITKPDVGPNIKSEEANSPPVRPRTAPSMLLPEKGKVSPMQRSVNSRRVMQERVR 708
Query: 237 XXPMLVTRRSNASPRVMPERT-KISPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRG 61
PMLVTRRSNASPR++PERT K SP+V PRH+TP RM+ +KAKSSP LDD PQTTGRG
Sbjct: 709 PSPMLVTRRSNASPRMIPERTTKTSPVVVGPRHDTPSRMMLQKAKSSPSLDDGPQTTGRG 768
Query: 60 FTSKKDDDVAEHLMLNHDVF 1
SKKDDDVA+ L+ NHDVF
Sbjct: 769 LMSKKDDDVADDLLQNHDVF 788
>gb|PLY98809.1| hypothetical protein LSAT_7X19941 [Lactuca sativa]
Length = 995
Score = 120 bits (301), Expect = 6e-29
Identities = 78/142 (54%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Frame = -2
Query: 399 AAKLPRIVHKPDSSPVSV-----VQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXXX 235
A K P V K DS P + VQRPRTAPS++ PEKGK SPM
Sbjct: 717 ATKSPTRVQKHDSRPNTRSEDTHVQRPRTAPSML-PEKGKVSPMPRSISSRRLMPEKLRT 775
Query: 234 XP-MLVTRRSNASPRVMPERTKISPMVAVPRHET-PKRMVTEKAKSSPLLDD-CPQTTGR 64
M+V RRS AS RVMPERT+IS ++ PRH+T RM+ +K KSSPL+DD PQTTGR
Sbjct: 776 PSPMVVARRSTASSRVMPERTRISSVLVSPRHDTINNRMIPQKPKSSPLMDDNGPQTTGR 835
Query: 63 GFTSKKD-DDVAEHLMLNHDVF 1
G SKKD DDVAE LM NHDVF
Sbjct: 836 GLVSKKDNDDVAEDLMTNHDVF 857
>ref|XP_023758258.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2
[Lactuca sativa]
Length = 1001
Score = 120 bits (301), Expect = 6e-29
Identities = 78/142 (54%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Frame = -2
Query: 399 AAKLPRIVHKPDSSPVSV-----VQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXXX 235
A K P V K DS P + VQRPRTAPS++ PEKGK SPM
Sbjct: 705 ATKSPTRVQKHDSRPNTRSEDTHVQRPRTAPSML-PEKGKVSPMPRSISSRRLMPEKLRT 763
Query: 234 XP-MLVTRRSNASPRVMPERTKISPMVAVPRHET-PKRMVTEKAKSSPLLDD-CPQTTGR 64
M+V RRS AS RVMPERT+IS ++ PRH+T RM+ +K KSSPL+DD PQTTGR
Sbjct: 764 PSPMVVARRSTASSRVMPERTRISSVLVSPRHDTINNRMIPQKPKSSPLMDDNGPQTTGR 823
Query: 63 GFTSKKD-DDVAEHLMLNHDVF 1
G SKKD DDVAE LM NHDVF
Sbjct: 824 GLVSKKDNDDVAEDLMTNHDVF 845
>ref|XP_023758251.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
[Lactuca sativa]
Length = 1003
Score = 120 bits (301), Expect = 6e-29
Identities = 78/142 (54%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Frame = -2
Query: 399 AAKLPRIVHKPDSSPVSV-----VQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXXX 235
A K P V K DS P + VQRPRTAPS++ PEKGK SPM
Sbjct: 707 ATKSPTRVQKHDSRPNTRSEDTHVQRPRTAPSML-PEKGKVSPMPRSISSRRLMPEKLRT 765
Query: 234 XP-MLVTRRSNASPRVMPERTKISPMVAVPRHET-PKRMVTEKAKSSPLLDD-CPQTTGR 64
M+V RRS AS RVMPERT+IS ++ PRH+T RM+ +K KSSPL+DD PQTTGR
Sbjct: 766 PSPMVVARRSTASSRVMPERTRISSVLVSPRHDTINNRMIPQKPKSSPLMDDNGPQTTGR 825
Query: 63 GFTSKKD-DDVAEHLMLNHDVF 1
G SKKD DDVAE LM NHDVF
Sbjct: 826 GLVSKKDNDDVAEDLMTNHDVF 847
>gb|KVH96988.1| G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 815
Score = 116 bits (291), Expect = 1e-27
Identities = 64/120 (53%), Positives = 77/120 (64%)
Frame = -2
Query: 360 SPVSVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXXXXPMLVTRRSNASPRVMPE 181
SPV VVQ P+T+P+++ P K KAS M PMLV RRS AS ++PE
Sbjct: 541 SPVLVVQSPKTSPNML-PLKAKASLMQRSVASRRVIPEKVRSSPMLVVRRSRASSHMIPE 599
Query: 180 RTKISPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRGFTSKKDDDVAEHLMLNHDVF 1
RTK SPM VPRH+ M EK K SPLL+D P+TTGRG SK DDDVAE LM++HD+F
Sbjct: 600 RTKTSPMSVVPRHDISTHMTPEKVKFSPLLEDDPETTGRGMASKNDDDVAEDLMVDHDLF 659
>ref|XP_023770843.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2
[Lactuca sativa]
Length = 762
Score = 79.3 bits (194), Expect = 2e-14
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Frame = -2
Query: 396 AKLPRIVHK--PDSSPVSVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXXXXPML 223
AKL + K P + +SV +RP + V++ EK ++ PMA
Sbjct: 491 AKLSPVTFKASPKAKVLSVQRRPVASKRVIS-EKVRSPPMA------------------- 530
Query: 222 VTRRSNASPRVMPERTKI----SPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRGFT 55
V +R AS +V+PER++I SP+ AVPR T M TEK K SPL +D PQTTGRG
Sbjct: 531 VAQRCRASSQVIPERSRIRTRTSPLPAVPRQITSTHMTTEKPKFSPLFEDNPQTTGRGLM 590
Query: 54 SKKDDDVAEHLMLNHDVF 1
K DD E LM++H++F
Sbjct: 591 CKNDD--TEDLMIDHELF 606
>ref|XP_023770834.1| katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
[Lactuca sativa]
gb|PLY97919.1| hypothetical protein LSAT_4X55580 [Lactuca sativa]
Length = 764
Score = 79.3 bits (194), Expect = 2e-14
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Frame = -2
Query: 396 AKLPRIVHK--PDSSPVSVVQRPRTAPSVVAPEKGKASPMAXXXXXXXXXXXXXXXXPML 223
AKL + K P + +SV +RP + V++ EK ++ PMA
Sbjct: 493 AKLSPVTFKASPKAKVLSVQRRPVASKRVIS-EKVRSPPMA------------------- 532
Query: 222 VTRRSNASPRVMPERTKI----SPMVAVPRHETPKRMVTEKAKSSPLLDDCPQTTGRGFT 55
V +R AS +V+PER++I SP+ AVPR T M TEK K SPL +D PQTTGRG
Sbjct: 533 VAQRCRASSQVIPERSRIRTRTSPLPAVPRQITSTHMTTEKPKFSPLFEDNPQTTGRGLM 592
Query: 54 SKKDDDVAEHLMLNHDVF 1
K DD E LM++H++F
Sbjct: 593 CKNDD--TEDLMIDHELF 608
>gb|KVH96987.1| hypothetical protein Ccrd_000918, partial [Cynara cardunculus var.
scolymus]
Length = 365
Score = 58.2 bits (139), Expect = 3e-07
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +2
Query: 200 EALDLRVTNIGVGLTLSGTTRLELPDLAIGEALPFSGATTLGAVLGLCTTDTGEE 364
EALDL T+IG LT SG TR E DL I EAL F G LG VLG CTT+TG++
Sbjct: 199 EALDLLTTSIGDDLTFSGITRREATDLCINEALAFRG-NMLGEVLGDCTTNTGDK 252