BLASTX nr result

ID: Chrysanthemum21_contig00037922 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037922
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI02070.1| F-box associated domain, type 1 [Cynara carduncul...    59   3e-07
ref|XP_023741651.1| F-box/kelch-repeat protein At3g06240-like [L...    57   1e-06
gb|KVI02071.1| F-box associated domain, type 1 [Cynara carduncul...    56   2e-06

>gb|KVI02070.1| F-box associated domain, type 1 [Cynara cardunculus var. scolymus]
          Length = 384

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = +1

Query: 1   LLVYCPRKKTVEKRDFFKPYFTGEAYHPSFLKLETFEPQRVLVF 132
           LLVYCP+ KT+E  + F+PYF+G  Y PSFLKL  F  +RV +F
Sbjct: 341 LLVYCPQSKTIEHTEMFEPYFSGLPYRPSFLKLRDFASERVRMF 384


>ref|XP_023741651.1| F-box/kelch-repeat protein At3g06240-like [Lactuca sativa]
          Length = 385

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +1

Query: 1   LLVYCPRKKTVEKRDFFKPYFTGEAYHPSFLKLETFEPQRVLV 129
           LL YCP++KT++  + F  YFTG AY PSFLKL+ F+ +RV V
Sbjct: 342 LLAYCPKRKTIDDTEIFDRYFTGMAYRPSFLKLQNFKSERVHV 384


>gb|KVI02071.1| F-box associated domain, type 1 [Cynara cardunculus var. scolymus]
          Length = 385

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 30/43 (69%)
 Frame = +1

Query: 1   LLVYCPRKKTVEKRDFFKPYFTGEAYHPSFLKLETFEPQRVLV 129
           LL YCP+ KTVE  + F  Y +G AY PSFLKLE FE +RV V
Sbjct: 342 LLSYCPKSKTVENTEIFDRYLSGMAYRPSFLKLENFESERVHV 384


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