BLASTX nr result

ID: Chrysanthemum21_contig00037869 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037869
         (589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY71934.1| hypothetical protein LSAT_3X18520 [Lactuca sativa]     102   2e-22
ref|XP_023736258.1| RING-H2 finger protein ATL52-like [Lactuca s...   102   3e-22
ref|XP_022023115.1| RING-H2 finger protein ATL52-like [Helianthu...    84   1e-15
ref|XP_021969355.1| RING-H2 finger protein ATL52-like [Helianthu...    66   2e-09
emb|CBI33875.3| unnamed protein product, partial [Vitis vinifera]      61   1e-07
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    61   1e-07
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]    57   4e-06

>gb|PLY71934.1| hypothetical protein LSAT_3X18520 [Lactuca sativa]
          Length = 388

 Score =  102 bits (255), Expect = 2e-22
 Identities = 64/142 (45%), Positives = 82/142 (57%), Gaps = 19/142 (13%)
 Frame = +3

Query: 3   PPEPEVHVSRRVPSDLGXXXXXXXXXXXXXXXXXXXSVSMSYMCQTRVSIADILYVNDQQ 182
           PP+ EV VSRRV  D+                    SVSM Y+ QTR+++ADIL+VN QQ
Sbjct: 247 PPQSEVIVSRRVQRDIAEGDAVIEIREEDGQREVRRSVSMGYLYQTRIAMADILFVN-QQ 305

Query: 183 EEMVSKEFRIEDGVGSSK------------------LVMNEDSMYQNRGDVSHSMMKRSF 308
           +EM  +  +  +GVGSSK                   V+NE+S+Y N GDV+H  MKRSF
Sbjct: 306 DEMELEICQFGEGVGSSKHVLKPEQCRFGYEDGSSKRVLNENSIYLNCGDVNHDKMKRSF 365

Query: 309 SSG-CLLIKGWKGKTLKVSSVP 371
           SSG  L I+GWKGKTL+VS +P
Sbjct: 366 SSGRHLFIRGWKGKTLRVSGLP 387


>ref|XP_023736258.1| RING-H2 finger protein ATL52-like [Lactuca sativa]
          Length = 411

 Score =  102 bits (255), Expect = 3e-22
 Identities = 64/142 (45%), Positives = 82/142 (57%), Gaps = 19/142 (13%)
 Frame = +3

Query: 3   PPEPEVHVSRRVPSDLGXXXXXXXXXXXXXXXXXXXSVSMSYMCQTRVSIADILYVNDQQ 182
           PP+ EV VSRRV  D+                    SVSM Y+ QTR+++ADIL+VN QQ
Sbjct: 270 PPQSEVIVSRRVQRDIAEGDAVIEIREEDGQREVRRSVSMGYLYQTRIAMADILFVN-QQ 328

Query: 183 EEMVSKEFRIEDGVGSSK------------------LVMNEDSMYQNRGDVSHSMMKRSF 308
           +EM  +  +  +GVGSSK                   V+NE+S+Y N GDV+H  MKRSF
Sbjct: 329 DEMELEICQFGEGVGSSKHVLKPEQCRFGYEDGSSKRVLNENSIYLNCGDVNHDKMKRSF 388

Query: 309 SSG-CLLIKGWKGKTLKVSSVP 371
           SSG  L I+GWKGKTL+VS +P
Sbjct: 389 SSGRHLFIRGWKGKTLRVSGLP 410


>ref|XP_022023115.1| RING-H2 finger protein ATL52-like [Helianthus annuus]
 gb|OTF85089.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 370

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 55/140 (39%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
 Frame = +3

Query: 3   PPEPEVHVSRRVPSDLGXXXXXXXXXXXXXXXXXXXSVSMSYMCQTRVSIADILYVN--- 173
           PP  ++ VSRRV +DL                    S+SM  +CQ RV   DIL+VN   
Sbjct: 230 PPRLDIFVSRRVLTDLEGRDAILDIREDRGEREVRRSISMGNLCQNRVLKDDILFVNHHC 289

Query: 174 --------------DQQEEMVSKEFRIEDGVGSSKLVMNEDSMYQNRGDVSHSMMKRSFS 311
                           ++ M S++ + E  VGSS+ V+N D+ Y N  D+   M+KRSFS
Sbjct: 290 DMELEKMHIGGDVGSSKQHMKSEQCQNECNVGSSQRVVNGDNTYLNCDDLRRDMLKRSFS 349

Query: 312 SG-CLLIKGWKGKTLKVSSV 368
           SG  L I+GWKGK LKVSSV
Sbjct: 350 SGRYLFIRGWKGKALKVSSV 369


>ref|XP_021969355.1| RING-H2 finger protein ATL52-like [Helianthus annuus]
 gb|OTG22079.1| putative RING/U-box superfamily protein [Helianthus annuus]
          Length = 323

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 38/81 (46%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   PPEPEVHVSRRVPSDLGXXXXXXXXXXXXXXXXXXXSVSMSYMCQTRVSIADILYVNDQQ 182
           PP P V VSR VPSDLG                   S+SM  +CQ RVSIADIL+VN QQ
Sbjct: 229 PPRPNVVVSRSVPSDLGSRDEIIDIREDEDEREVRRSISMVNLCQNRVSIADILFVN-QQ 287

Query: 183 EEMVSKEFRIEDGVGSSKLVM 245
           +++  +E  I D VGSSK ++
Sbjct: 288 DDIELEELEIGDDVGSSKQIL 308


>emb|CBI33875.3| unnamed protein product, partial [Vitis vinifera]
          Length = 304

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
 Frame = +3

Query: 111 SVSMSYMCQTRVSIADILYVN-DQQEEMVSKEFRIEDGVGSSKLVMNEDSMYQNRGDVSH 287
           S+S+ Y CQTR+S+ADIL +N D+  +M   + +    VGSSK+ + E S Y +R  V H
Sbjct: 205 SISLDYSCQTRLSVADILLMNEDEDPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLH 264

Query: 288 SM-----MKRSFSSGCLL 326
            +     MKRSFSSG LL
Sbjct: 265 CVMSPVSMKRSFSSGRLL 282


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900 [Vitis
           vinifera]
          Length = 375

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
 Frame = +3

Query: 111 SVSMSYMCQTRVSIADILYVN-DQQEEMVSKEFRIEDGVGSSKLVMNEDSMYQNRGDVSH 287
           S+S+ Y CQTR+S+ADIL +N D+  +M   + +    VGSSK+ + E S Y +R  V H
Sbjct: 276 SISLDYSCQTRLSVADILLMNEDEDPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLH 335

Query: 288 SM-----MKRSFSSGCLL 326
            +     MKRSFSSG LL
Sbjct: 336 CVMSPVSMKRSFSSGRLL 353


>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
 Frame = +3

Query: 111  SVSMSYMCQTRVSIADILYVN-DQQEEMVSKEFRIEDGVGSSKLVMNEDSMYQNRGDVSH 287
            S+S+ Y  QTR+S+ADIL +N D+  +M   + +    VGSSK+ + E S Y +R  V H
Sbjct: 1278 SISLDYSXQTRLSVADILLMNEDEDPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLH 1337

Query: 288  SM-----MKRSFSSGCLL 326
             +     MKRSFSSG LL
Sbjct: 1338 CVMSPVSMKRSFSSGRLL 1355


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