BLASTX nr result

ID: Chrysanthemum21_contig00037707 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037707
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY90301.1| hypothetical protein LSAT_2X119500 [Lactuca sativa]     98   2e-22
gb|KVI09791.1| Heavy metal-associated domain, HMA [Cynara cardun...    55   7e-06

>gb|PLY90301.1| hypothetical protein LSAT_2X119500 [Lactuca sativa]
          Length = 208

 Score = 98.2 bits (243), Expect = 2e-22
 Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
 Frame = -2

Query: 449 SMSQQVILPTQPTLNLQDFVE-VLKLSKDLDSVEITHTNTYKITFNHRPRNPPDARTRPQ 273
           S +    +P+Q T +LQ   E +L + + LD VEIT ++T ++ F HR  NPP  R  P+
Sbjct: 79  SSTVSATVPSQRTFDLQGLGEAMLGMFQVLDGVEITRSDTLRVNFIHR-ENPPVVRVEPR 137

Query: 272 GNIDFHMGDGDYVYAPPRSFQGAPPWQPTEPSTPMMSSARDEVRGYPEHEYYRHAATCKH 93
            NI  + GD D  +AP R    APPW   EPS P++S+  +EV GYP   YY + +T  H
Sbjct: 138 RNISSY-GDVDVEHAPRRPTPRAPPWPVVEPSAPLISTEEEEVYGYPPEFYYGY-STIDH 195

Query: 92  DRD-RPNGCCSIM 57
             D RP+GCC IM
Sbjct: 196 SHDHRPDGCCRIM 208


>gb|KVI09791.1| Heavy metal-associated domain, HMA [Cynara cardunculus var.
           scolymus]
          Length = 226

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
 Frame = -2

Query: 407 NLQDFVEVL-KLS--KDLDSVEITHTNTYKITFNH----RPRNPPDARTRPQGNIDFHMG 249
           N+QD  E L K+S  K L+SVE   +NT K  FN       R P       +G+    + 
Sbjct: 109 NVQDMAEALVKVSHAKGLESVEYRQSNTLKFNFNQPSSSSSRLPTATYHDVRGSNGVRIT 168

Query: 248 DGDYVYAPPRSFQGAPPWQPT-EPSTPMMSSARDEVRGYPEHEYYRHAATCKHDRDRPNG 72
             DY Y  P      PP  PT EPS P++ + +D+V GYP  ++Y   +    +    + 
Sbjct: 169 ADDYEYVVP------PPPPPTAEPSAPLIPTTQDQVTGYPADQFYGTFSKTSRNH-HSHD 221

Query: 71  CCSIM 57
           CC+I+
Sbjct: 222 CCTIL 226


Top