BLASTX nr result

ID: Chrysanthemum21_contig00037567 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037567
         (493 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109494.1| hypothetical protein Poptr_cp015 [Populus tr...    66   1e-11
gb|AVK41920.1| hypothetical protein (chloroplast) [Populus wilso...    52   4e-06

>ref|YP_001109494.1| hypothetical protein Poptr_cp015 [Populus trichocarpa]
 gb|ABO36697.1| conserved hypothetical protein (chloroplast) [Populus trichocarpa]
 gb|APO08990.1| hypothetical protein (chloroplast) [Populus nigra]
          Length = 56

 Score = 66.2 bits (160), Expect = 1e-11
 Identities = 34/55 (61%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +2

Query: 329 LNWKYRQIL--AESKEMKINRKGGQLVPISSLLNLNIRIADIVMIQWVRSTYFSF 487
           +N KYRQI      + MK+  K G  VPISS+ NL IRI DIVMIQWVRSTYF F
Sbjct: 1   MNQKYRQIFFFGVQRNMKMKEKSGSTVPISSISNLTIRIVDIVMIQWVRSTYFFF 55


>gb|AVK41920.1| hypothetical protein (chloroplast) [Populus wilsonii]
          Length = 48

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 364 QRNENK*KRGSTCSNFISIEFEYQNSGYSHDSMG 465
           ++ EN+ K+   CSNFI IEF+YQNSGYSHDSMG
Sbjct: 15  KKYENERKKRIYCSNFIYIEFDYQNSGYSHDSMG 48


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