BLASTX nr result

ID: Chrysanthemum21_contig00037558 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037558
         (766 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH20947.1| hypothetical protein Ccrd_025896 [Cynara carduncu...    59   2e-06

>gb|KVH20947.1| hypothetical protein Ccrd_025896 [Cynara cardunculus var. scolymus]
          Length = 236

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/51 (58%), Positives = 37/51 (72%)
 Frame = -2

Query: 306 LVGNDDSTHVQLSIKSFPPAGLTA*SLPKKVILGVCIFLIYPYFECFHTIL 154
           ++GNDD THVQLSI +FPPA LTA + P  V+L VCIFLI P   C  ++L
Sbjct: 183 MLGNDDRTHVQLSINAFPPACLTAKAHPNTVLLDVCIFLI-PRCPCLASVL 232


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