BLASTX nr result

ID: Chrysanthemum21_contig00037528 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037528
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_014757873.1| PREDICTED: uncharacterized protein LOC106866...    58   2e-07
ref|XP_014757768.1| PREDICTED: uncharacterized protein LOC106866...    58   2e-07
gb|KRY06569.1| Retrovirus-related Pol polyprotein from transposo...    56   1e-06

>ref|XP_014757873.1| PREDICTED: uncharacterized protein LOC106866720, partial
           [Brachypodium distachyon]
          Length = 847

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
 Frame = -1

Query: 350 KVIVARYGDFLERDLVSQEFSGRVYDLEDDQEDALPSENT---NVLPVEPDSLGXXXXXX 180
           KV VA+ G FLE++ +S+E SGR  +L++  E +L  E +     +PV P S        
Sbjct: 592 KVFVAKNGSFLEKEFLSKEVSGRKVELDEVIEPSLEFECSAAPETVPVHPASAREEANDN 651

Query: 179 XXXXXXXXRN-IRAPERL-----CLNVEVEETMLGDLGEPTSYKAAMASPDKAKWQVAMN 18
                      +R   R        NV V   ML D  EP +Y+ AM SPD  KW  AM 
Sbjct: 652 DHEVLNETTTELRRSTRTRNTPEWYNVRVMNVMLLDNDEPANYEEAMMSPDSEKWLEAMK 711

Query: 17  GEMQS 3
            EM S
Sbjct: 712 SEMGS 716


>ref|XP_014757768.1| PREDICTED: uncharacterized protein LOC106866668, partial
           [Brachypodium distachyon]
          Length = 1278

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
 Frame = -1

Query: 350 KVIVARYGDFLERDLVSQEFSGRVYDLEDDQEDALPSENT---NVLPVEPDSLGXXXXXX 180
           KV VA+ G FLE++ +S+E SGR  +L++  E +L  E +     +PV P S        
Sbjct: 398 KVFVAKNGSFLEKEFLSKEVSGRKVELDEVIEPSLEFECSAAPETVPVHPASAREEANDN 457

Query: 179 XXXXXXXXRN-IRAPERL-----CLNVEVEETMLGDLGEPTSYKAAMASPDKAKWQVAMN 18
                      +R   R        NV V   ML D  EP +Y+ AM SPD  KW  AM 
Sbjct: 458 DHEVLNETTTELRRSTRTRNTPEWYNVRVMNVMLLDNDEPANYEEAMMSPDSEKWLEAMK 517

Query: 17  GEMQS 3
            EM S
Sbjct: 518 SEMGS 522



 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
 Frame = -1

Query: 350  KVIVARYGDFLERDLVSQEFSGRVYDLEDDQEDALPSENT---NVLPVEPDSLGXXXXXX 180
            KV VA+ G FLE++ +S+E SGR  +L++  E +L  E +     +PV P S        
Sbjct: 1023 KVFVAKNGSFLEKEFLSKEVSGRKVELDEVIEPSLEFECSAAPETVPVHPASAREEANDN 1082

Query: 179  XXXXXXXXRN-IRAPERL-----CLNVEVEETMLGDLGEPTSYKAAMASPDKAKWQVAMN 18
                       +R   R        NV V   ML D  EP +Y+ AM SPD  KW  AM 
Sbjct: 1083 DHEVLNETTTELRRSTRTRNTPEWYNVRVMNVMLLDNDEPANYEEAMMSPDSEKWLEAMK 1142

Query: 17   GEMQS 3
             EM S
Sbjct: 1143 SEMGS 1147


>gb|KRY06569.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trichinella patagoniensis]
          Length = 618

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
 Frame = -1

Query: 350 KVIVARYGDFLERDLVSQEFSGRVYDLEDDQEDA---LPSENTNVLPVEPDSLG------ 198
           K+ VA+ G FLE++ +S+E SGR  +L++    A     S +   +PV P  +       
Sbjct: 174 KIFVAKNGSFLEKEFLSKEVSGRKVELDEVTVPAPLLESSSSQKSVPVTPTPISEEVNDN 233

Query: 197 -XXXXXXXXXXXXXXRNIR-APERLCLNVEVEETMLGDLGEPTSYKAAMASPDKAKWQVA 24
                            +R APE       V E ML D  EPT+Y+ AM SPD AKW  A
Sbjct: 234 DHETSDQVTTEPRRSTRVRSAPE--WYGNPVLEVMLLDHDEPTNYEEAMMSPDSAKWLEA 291

Query: 23  MNGEMQS 3
           M  EM+S
Sbjct: 292 MKSEMRS 298


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