BLASTX nr result

ID: Chrysanthemum21_contig00037426 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037426
         (374 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023746752.1| B3 domain-containing protein REM9-like [Lact...    61   3e-08
ref|XP_022021703.1| B3 domain-containing protein At5g60140-like ...    55   3e-06
gb|OTF88205.1| putative DNA-binding pseudobarrel domain-containi...    55   3e-06
ref|XP_023746756.1| B3 domain-containing protein REM2 [Lactuca s...    53   7e-06

>ref|XP_023746752.1| B3 domain-containing protein REM9-like [Lactuca sativa]
          Length = 554

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +1

Query: 4   FRRSNNISEGDECVFKYIRSEDKMCLVRVTKRNTQARSSPP 126
           FRR N + EGD+CVFK+I+SEDK+CL +VTK+  Q++  PP
Sbjct: 266 FRRVNELCEGDKCVFKFIKSEDKLCLAKVTKKRVQSKQPPP 306


>ref|XP_022021703.1| B3 domain-containing protein At5g60140-like [Helianthus annuus]
          Length = 341

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +1

Query: 4   FRRSNNISEGDECVFKYIRSEDKMCLVRVTKRNTQAR 114
           FRRSN++ EGDECVFK+IR+EDK+ L RVTK    A+
Sbjct: 265 FRRSNDLCEGDECVFKFIRNEDKLLLARVTKNKRPAK 301


>gb|OTF88205.1| putative DNA-binding pseudobarrel domain-containing protein
           [Helianthus annuus]
          Length = 362

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +1

Query: 4   FRRSNNISEGDECVFKYIRSEDKMCLVRVTKRNTQAR 114
           FRRSN++ EGDECVFK+IR+EDK+ L RVTK    A+
Sbjct: 286 FRRSNDLCEGDECVFKFIRNEDKLLLARVTKNKRPAK 322


>ref|XP_023746756.1| B3 domain-containing protein REM2 [Lactuca sativa]
          Length = 172

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = +1

Query: 4   FRRSNNISEGDECVFKYIRSEDKMCLVRVTKR 99
           FRR N + EGD CVFKY+R+EDK+CL  VTK+
Sbjct: 34  FRRDNELCEGDTCVFKYLRTEDKLCLAEVTKK 65