BLASTX nr result

ID: Chrysanthemum21_contig00037411 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037411
         (550 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH77846.1| Nucleotide-binding, alpha-beta plait [Cynara card...   126   3e-30
ref|XP_021977431.1| nucleolin-like isoform X3 [Helianthus annuus]     120   3e-28
ref|XP_021977430.1| nucleolin-like isoform X2 [Helianthus annuus]     120   3e-28
ref|XP_021977429.1| nucleolin-like isoform X1 [Helianthus annuus...   120   3e-28
ref|XP_023755580.1| nucleolin-like [Lactuca sativa]                    77   5e-13
gb|PLY91622.1| hypothetical protein LSAT_8X8220 [Lactuca sativa]       75   2e-12

>gb|KVH77846.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
            scolymus]
          Length = 1001

 Score =  126 bits (316), Expect = 3e-30
 Identities = 93/221 (42%), Positives = 104/221 (47%), Gaps = 60/221 (27%)
 Frame = +3

Query: 66   LRHGS-QGTPKKPKFDGEVQNGKTVLKPGNHKRKNARTHESRGDGNNKNAHKKNPFKKQK 242
            LRHG  +GTPKK K   + QN K   K G+HKRK    +E   DG N+N H K PFKKQK
Sbjct: 717  LRHGGDKGTPKKLKVGNDGQNSKIASKAGSHKRKKFSNYEGHEDGGNRNTHNKKPFKKQK 776

Query: 243  VVGNM--RERHMSRNPKSDTQGRRGHVDCRNFTRYTDPYAPKYAVSAVNSYH-------- 392
              GNM  RER  SRNP SDT  R+G  D RN  RY DPY PK+A S  ++YH        
Sbjct: 777  --GNMHGRERDNSRNPTSDTHLRKGRDDYRNSPRYIDPYTPKHAAS--HAYHLGLDSMST 832

Query: 393  ------EPLAG------------YSGYV----------QTVLLEPA-------------- 446
                  EP AG            YS YV          QTV LEPA              
Sbjct: 833  RFHMEMEPHAGYIEPASAKQNLSYSRYVQPVAQTLRQHQTVYLEPAAGSQSQLHSRYLDR 892

Query: 447  -------YRRYFGRDVLPAV*PYSLYCPSKYVQIAHYPYHS 548
                   ++ Y    V P V PY  Y PS  VQIAH PY S
Sbjct: 893  LATTQSHHKGYIETAVGPEVQPYRGYRPSAIVQIAHDPYDS 933


>ref|XP_021977431.1| nucleolin-like isoform X3 [Helianthus annuus]
          Length = 888

 Score =  120 bits (301), Expect = 3e-28
 Identities = 88/213 (41%), Positives = 103/213 (48%), Gaps = 58/213 (27%)
 Frame = +3

Query: 84   GTPKKPKFDGEVQNGKTVLKPGNHKRKNARTHESRGDGNNKNAHKKNPFKKQKVVGNM-- 257
            GTPKKP+  G+ QN + V K G++KRKNA  +E+R D  N+NA  K PFKKQK  GNM  
Sbjct: 610  GTPKKPRNGGQAQNSQPVSKAGSNKRKNASGNEAREDRGNRNAQGKKPFKKQK--GNMHG 667

Query: 258  RERHMSRNPKSDTQGRRGHVDCRNFTRYTDPY-APKYAVSAVNSYH-------------- 392
            RER   R PKSD   RRG  + RN +RY DPY APKYA SA N YH              
Sbjct: 668  RERDNFRKPKSDAYTRRGRDEYRNSSRYIDPYAAPKYAASASNDYHVASDHSLSTRRYKE 727

Query: 393  -EPLAGY-----SGYV-------------QTVLLEP-------AYRRYFGRDVL------ 476
             EP AGY     SGY              Q++ L P        Y RY  + V+      
Sbjct: 728  MEPHAGYIEPSRSGYAPQHVVRATHSQHHQSMYLGPPSTGQSQLYPRYLDQPVMSQSHRG 787

Query: 477  ---------PAV*PYSLYCPSKYVQIAHYPYHS 548
                     P V PY  Y PS  V +A  PY S
Sbjct: 788  GYIETTAVAPEVQPYRDYRPSAIVHVARSPYES 820


>ref|XP_021977430.1| nucleolin-like isoform X2 [Helianthus annuus]
          Length = 902

 Score =  120 bits (301), Expect = 3e-28
 Identities = 88/213 (41%), Positives = 103/213 (48%), Gaps = 58/213 (27%)
 Frame = +3

Query: 84   GTPKKPKFDGEVQNGKTVLKPGNHKRKNARTHESRGDGNNKNAHKKNPFKKQKVVGNM-- 257
            GTPKKP+  G+ QN + V K G++KRKNA  +E+R D  N+NA  K PFKKQK  GNM  
Sbjct: 629  GTPKKPRNGGQAQNSQPVSKAGSNKRKNASGNEAREDRGNRNAQGKKPFKKQK--GNMHG 686

Query: 258  RERHMSRNPKSDTQGRRGHVDCRNFTRYTDPY-APKYAVSAVNSYH-------------- 392
            RER   R PKSD   RRG  + RN +RY DPY APKYA SA N YH              
Sbjct: 687  RERDNFRKPKSDAYTRRGRDEYRNSSRYIDPYAAPKYAASASNDYHVASDHSLSTRRYKE 746

Query: 393  -EPLAGY-----SGYV-------------QTVLLEP-------AYRRYFGRDVL------ 476
             EP AGY     SGY              Q++ L P        Y RY  + V+      
Sbjct: 747  MEPHAGYIEPSRSGYAPQHVVRATHSQHHQSMYLGPPSTGQSQLYPRYLDQPVMSQSHRG 806

Query: 477  ---------PAV*PYSLYCPSKYVQIAHYPYHS 548
                     P V PY  Y PS  V +A  PY S
Sbjct: 807  GYIETTAVAPEVQPYRDYRPSAIVHVARSPYES 839


>ref|XP_021977429.1| nucleolin-like isoform X1 [Helianthus annuus]
 gb|OTG18528.1| putative nucleotide-binding alpha-beta plait domain-containing
            protein [Helianthus annuus]
          Length = 907

 Score =  120 bits (301), Expect = 3e-28
 Identities = 88/213 (41%), Positives = 103/213 (48%), Gaps = 58/213 (27%)
 Frame = +3

Query: 84   GTPKKPKFDGEVQNGKTVLKPGNHKRKNARTHESRGDGNNKNAHKKNPFKKQKVVGNM-- 257
            GTPKKP+  G+ QN + V K G++KRKNA  +E+R D  N+NA  K PFKKQK  GNM  
Sbjct: 629  GTPKKPRNGGQAQNSQPVSKAGSNKRKNASGNEAREDRGNRNAQGKKPFKKQK--GNMHG 686

Query: 258  RERHMSRNPKSDTQGRRGHVDCRNFTRYTDPY-APKYAVSAVNSYH-------------- 392
            RER   R PKSD   RRG  + RN +RY DPY APKYA SA N YH              
Sbjct: 687  RERDNFRKPKSDAYTRRGRDEYRNSSRYIDPYAAPKYAASASNDYHVASDHSLSTRRYKE 746

Query: 393  -EPLAGY-----SGYV-------------QTVLLEP-------AYRRYFGRDVL------ 476
             EP AGY     SGY              Q++ L P        Y RY  + V+      
Sbjct: 747  MEPHAGYIEPSRSGYAPQHVVRATHSQHHQSMYLGPPSTGQSQLYPRYLDQPVMSQSHRG 806

Query: 477  ---------PAV*PYSLYCPSKYVQIAHYPYHS 548
                     P V PY  Y PS  V +A  PY S
Sbjct: 807  GYIETTAVAPEVQPYRDYRPSAIVHVARSPYES 839


>ref|XP_023755580.1| nucleolin-like [Lactuca sativa]
          Length = 866

 Score = 77.0 bits (188), Expect = 5e-13
 Identities = 64/180 (35%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
 Frame = +3

Query: 66   LRHGSQGTPKKPKFDGEV--QNGKTVLKPGNHKRKNARTHESRGDGNNKNAHKKNPFKKQ 239
            LRHG     KKPKF   V  QN K+  KPGNHKRK       + DG N+N   K PFKKQ
Sbjct: 593  LRHGDT---KKPKFGVGVEGQNSKSASKPGNHKRK-----PPKHDGVNRNPQNKKPFKKQ 644

Query: 240  K----VVGNMRERHMSRNPKSDTQGRRGHVDCRNFTRYTDPYAPKYAVS---AVNSYHEP 398
            K     +G  R+  + RNP SD   RRGH D R+ TR T      YAV+   A +S+  P
Sbjct: 645  KGNVHAIGRERDNVIIRNPNSDNHIRRGHDDYRSSTR-TRYMGHSYAVAVAVASDSFRLP 703

Query: 399  -----------LAGYSGYVQTVLLEPAYRRYFGRDVLPAV*PYSLYCPSKYVQIAHYPYH 545
                       +  ++GY++ V       R           PYS Y    +    ++P+H
Sbjct: 704  PDSLSTRHFKEMEAHAGYIEPVSGATHSSR-----------PYSGYVQPTHNHNHNHPHH 752


>gb|PLY91622.1| hypothetical protein LSAT_8X8220 [Lactuca sativa]
          Length = 732

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 51/109 (46%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
 Frame = +3

Query: 66  LRHGSQGTPKKPKFDGEV--QNGKTVLKPGNHKRKNARTHESRGDGNNKNAHKKNPFKKQ 239
           LRHG     KKPKF   V  QN K+  KPGNHKRK       + DG N+N   K PFKKQ
Sbjct: 593 LRHGDT---KKPKFGVGVEGQNSKSASKPGNHKRK-----PPKHDGVNRNPQNKKPFKKQ 644

Query: 240 K----VVGNMRERHMSRNPKSDTQGRRGHVDCRNFTRYTDPYAPKYAVS 374
           K     +G  R+  + RNP SD   RRGH D R+ TR T      YAV+
Sbjct: 645 KGNVHAIGRERDNVIIRNPNSDNHIRRGHDDYRSSTR-TRYMGHSYAVA 692


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