BLASTX nr result

ID: Chrysanthemum21_contig00037110 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00037110
         (365 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF92762.1| putative F-box domain-containing protein [Heliant...    82   9e-16
ref|XP_022018171.1| F-box protein At5g07610-like [Helianthus ann...    82   9e-16
gb|KVH97376.1| F-box domain, cyclin-like protein [Cynara cardunc...    79   1e-14
ref|XP_021973089.1| F-box protein At5g07610-like isoform X1 [Hel...    62   6e-09
emb|CDP16132.1| unnamed protein product [Coffea canephora]             56   2e-06
ref|XP_021974135.1| F-box protein At5g07610-like [Helianthus ann...    55   3e-06
ref|XP_023753391.1| F-box protein At5g07610-like [Lactuca sativa]      54   7e-06

>gb|OTF92762.1| putative F-box domain-containing protein [Helianthus annuus]
          Length = 355

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 53/129 (41%), Positives = 68/129 (52%), Gaps = 23/129 (17%)
 Frame = -3

Query: 318 GLRVGMYWNDGIHWISGR---LHYKLDFVNKTGVLTKIQVPVTVDD---YC--KLFESRG 163
           G   G+YWND IHW+      LH +LD  +K   LT I  P  +D    +C  +LFES G
Sbjct: 198 GFHQGIYWNDAIHWLHNANRALHCRLDVEHKC--LTSINTPKILDGKEVHCDQRLFESHG 255

Query: 162 CLLLLGKDKTHSHQLNVYEMRNGDSEWSFKYSVNLSRITL---------------DGVWC 28
           CLLLL  D     ++++YEMR GDS WS KY VNL    +               + V C
Sbjct: 256 CLLLLCIDL---QRMSIYEMREGDSGWSVKYIVNLVEFMMLLPKTWRKGLRCLCSNHVRC 312

Query: 27  ISLGEREED 1
           I +G+REED
Sbjct: 313 IMIGKREED 321


>ref|XP_022018171.1| F-box protein At5g07610-like [Helianthus annuus]
          Length = 366

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 53/129 (41%), Positives = 68/129 (52%), Gaps = 23/129 (17%)
 Frame = -3

Query: 318 GLRVGMYWNDGIHWISGR---LHYKLDFVNKTGVLTKIQVPVTVDD---YC--KLFESRG 163
           G   G+YWND IHW+      LH +LD  +K   LT I  P  +D    +C  +LFES G
Sbjct: 198 GFHQGIYWNDAIHWLHNANRALHCRLDVEHKC--LTSINTPKILDGKEVHCDQRLFESHG 255

Query: 162 CLLLLGKDKTHSHQLNVYEMRNGDSEWSFKYSVNLSRITL---------------DGVWC 28
           CLLLL  D     ++++YEMR GDS WS KY VNL    +               + V C
Sbjct: 256 CLLLLCIDL---QRMSIYEMREGDSGWSVKYIVNLVEFMMLLPKTWRKGLRCLCSNHVRC 312

Query: 27  ISLGEREED 1
           I +G+REED
Sbjct: 313 IMIGKREED 321


>gb|KVH97376.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 365

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 55/130 (42%), Positives = 68/130 (52%), Gaps = 21/130 (16%)
 Frame = -3

Query: 327 PPEGLRVGMYWNDGIHW---ISGRLHYKLDFVNKTGVLTKIQVPVTVDDYC----KLFES 169
           P  G   G+YWN+ IHW   ++G LH+KLD  +   +LT++Q P T+D       KL ES
Sbjct: 117 PDAGFHHGIYWNNAIHWLDFVNGGLHFKLDIEHP--LLTRVQTPGTLDRKLHYVHKLLES 174

Query: 168 RGCLLLLGKDKTHSHQLNVYEMRNGDSEWSFKYSVNLSRI--TLDGVWCIS--------- 22
           RG LLL+      S QL VYEMRN  S W  KY VNL  +       W IS         
Sbjct: 175 RGRLLLV-YPVLDSRQLKVYEMRNEYSGWLVKYIVNLDDMGKLFPKTWLISAKRFCIIVR 233

Query: 21  ---LGEREED 1
              +GEREED
Sbjct: 234 SVVVGEREED 243


>ref|XP_021973089.1| F-box protein At5g07610-like isoform X1 [Helianthus annuus]
 ref|XP_021973090.1| F-box protein At5g07610-like isoform X2 [Helianthus annuus]
          Length = 227

 Score = 61.6 bits (148), Expect = 6e-09
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
 Frame = -3

Query: 303 MYWNDGIHWIS--GRLHYKLDFVNKTGVLTKIQVPVTVDDYC--KLFESRGCLLLLG--K 142
           +YW+  IHW+S  G  H  L+  ++   + +++   ++  Y   KLF SRGCLLL+    
Sbjct: 60  VYWHGAIHWLSRIGVYHLSLELDDEEENILQVEEDPSIRYYTRDKLFVSRGCLLLVKMLH 119

Query: 141 DKTHSHQLNVYEMRNG--DSEWSFKYSVNLSRI-----TLDGVWCISLGEREED 1
           +     Q+NVYEM+N    S WS +Y VNL            V  + LGEREED
Sbjct: 120 EPEPPLQMNVYEMKNNSYSSGWSLRYHVNLQSAGSFLGPYFNVLALVLGEREED 173


>emb|CDP16132.1| unnamed protein product [Coffea canephora]
          Length = 459

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
 Frame = -3

Query: 363 TGIWSIIGS---HSNPPEGLRVGMYWNDGIHWIS---GRLHYKLDFVNKTGVLTKIQVP- 205
           TG+WS   +   H         G YWN  +HW+S   G L + LD      V+     P 
Sbjct: 257 TGLWSETAAKFEHDGDRYYFEKGAYWNGDLHWVSVSSGTLCFDLDNKRLRPVIPHPSTPS 316

Query: 204 VTVDDYCKLFESRGCLLLLGKDKTHSHQLNVYEMRNGDSEWSFKYSVNLSRI 49
           V   D C   ES G L L+G DK  +    VY ++   S W  KYS++++ +
Sbjct: 317 VEWRDICYFGESGGDLYLIGLDKPQAMLWKVYSLKRDYSGWVVKYSIDVASL 368


>ref|XP_021974135.1| F-box protein At5g07610-like [Helianthus annuus]
          Length = 448

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
 Frame = -3

Query: 363 TGIWSIIGSHSNPPEGLRV------GMYWNDGIHWISGR---LHYKLDFVNKTGVLTKI- 214
           TG W + G+    P G +V      G+YWN  +HW++ +   L+ K+D      V T + 
Sbjct: 240 TGKWRMFGT----PCGNQVDTEFMGGVYWNGAVHWVNKKGYVLYLKIDEDRVDRVATPVV 295

Query: 213 QVPVTVDDYC-KLFESRGCLLLLGKDKTHSHQLNVYEMRNGDSEWSFKYSVNLSRI 49
                V  +C  + ES  CLL +      S +L++YEM    S WS KY V+L+R+
Sbjct: 296 HDGWNVKKHCYPIVESNDCLLFIDIFPASSLKLDIYEMNRDYSGWSVKYHVDLNRV 351


>ref|XP_023753391.1| F-box protein At5g07610-like [Lactuca sativa]
          Length = 410

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 18/123 (14%)
 Frame = -3

Query: 363 TGIWSIIGSHSNPPEGLRVG----MYWNDGIHWI---SGRLHYKLDFVNKTGVLTKIQVP 205
           TG W I     + P    V     +YWN  IHW+     RL++K+D    T     + +P
Sbjct: 208 TGKWKISDESLSLPHPYFVPFHYIVYWNQAIHWVPFGDNRLYFKVD----TEEFKSLPLP 263

Query: 204 VTV---------DDYCKLFESRGCLLLLGK-DKTHSH-QLNVYEMRNGDSEWSFKYSVNL 58
           V+V         D      ESRG L L+ + D++ SH  LNVYEM N  S W  KY + L
Sbjct: 264 VSVASSEGYEDWDMTLYFGESRGHLHLVERADRSESHLHLNVYEMLNDHSGWFLKYRIEL 323

Query: 57  SRI 49
             +
Sbjct: 324 DEL 326


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