BLASTX nr result

ID: Chrysanthemum21_contig00036821 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036821
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05837.1| F-box domain, cyclin-like protein [Cynara cardunc...    69   6e-11
ref|XP_023758962.1| F-box/kelch-repeat protein At1g51550 [Lactuc...    66   4e-10
ref|XP_021984598.1| F-box/kelch-repeat protein At1g51550 [Helian...    58   2e-07
gb|OTG16992.1| putative kelch repeat-containing F-box family pro...    58   3e-07

>gb|KVI05837.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 448

 Score = 68.6 bits (166), Expect = 6e-11
 Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +1

Query: 220 FAMTCKKTNHLLHSNNDLWKSICTRDWGHPTLDAF---TNNNIWDWRSLYQR 366
           FAMTCKKT  L HS+  LWKSICTRDWGH T+DA    ++++  DW+ LYQR
Sbjct: 49  FAMTCKKTTRLTHSHT-LWKSICTRDWGHSTVDALLTSSSSSSLDWKRLYQR 99


>ref|XP_023758962.1| F-box/kelch-repeat protein At1g51550 [Lactuca sativa]
 gb|PLY89113.1| hypothetical protein LSAT_4X89221 [Lactuca sativa]
          Length = 439

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +1

Query: 220 FAMTCKKTNHLLHSNNDLWKSICTRDWGHPTLDAFTNNN----IWDWRSLYQR 366
           FAMTCKKT  L  S+  LWKSICTRDWGH T+DA  N++      DW+ LYQR
Sbjct: 42  FAMTCKKTTRLTQSHT-LWKSICTRDWGHSTVDALVNSSSSPLSIDWKRLYQR 93


>ref|XP_021984598.1| F-box/kelch-repeat protein At1g51550 [Helianthus annuus]
          Length = 427

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = +1

Query: 220 FAMTCKKTNHLLHSNNDLWKSICTRDWGHPTLDAFTNNNIWDWRSLYQR 366
           FAMTCKKT  LL  +  LWKSIC RDWGH TLDA + +   DW  LY+R
Sbjct: 43  FAMTCKKTL-LLTRSQTLWKSICARDWGHSTLDACSPS--LDWIQLYRR 88


>gb|OTG16992.1| putative kelch repeat-containing F-box family protein [Helianthus
           annuus]
          Length = 487

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = +1

Query: 220 FAMTCKKTNHLLHSNNDLWKSICTRDWGHPTLDAFTNNNIWDWRSLYQR 366
           FAMTCKKT  LL  +  LWKSIC RDWGH TLDA + +   DW  LY+R
Sbjct: 103 FAMTCKKTL-LLTRSQTLWKSICARDWGHSTLDACSPS--LDWIQLYRR 148


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