BLASTX nr result
ID: Chrysanthemum21_contig00036812
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00036812
(537 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021981591.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme... 164 2e-43
gb|OTG37776.1| putative DNA-directed RNA polymerase, subunit bet... 164 2e-43
ref|XP_022012121.1| DNA-directed RNA polymerase V subunit 1-like... 163 3e-43
gb|OTF95291.1| putative nuclear RNA polymerase D1B [Helianthus a... 163 3e-43
emb|CDY07630.1| BnaA03g18810D [Brassica napus] 109 3e-24
ref|XP_022571716.1| DNA-directed RNA polymerase V subunit 1-like... 97 5e-20
ref|XP_013734544.1| DNA-directed RNA polymerase V subunit 1-like... 97 5e-20
ref|XP_009133402.1| PREDICTED: DNA-directed RNA polymerase V sub... 97 5e-20
gb|OTG11416.1| putative polyribonucleotide nucleotidyltransferas... 97 7e-20
ref|XP_021988778.1| transcription elongation factor SPT6 homolog... 97 7e-20
gb|KVH94774.1| Nucleic acid-binding, OB-fold, partial [Cynara ca... 95 2e-19
emb|CDY60335.1| BnaC03g72290D [Brassica napus] 92 2e-18
ref|XP_013717052.1| DNA-directed RNA polymerase V subunit 1-like... 92 2e-18
ref|XP_018476063.1| PREDICTED: DNA-directed RNA polymerase V sub... 92 3e-18
ref|XP_013628526.1| PREDICTED: DNA-directed RNA polymerase V sub... 91 5e-18
ref|XP_013628527.1| PREDICTED: DNA-directed RNA polymerase V sub... 91 7e-18
ref|XP_018476064.1| PREDICTED: DNA-directed RNA polymerase V sub... 91 9e-18
ref|XP_013628528.1| PREDICTED: DNA-directed RNA polymerase V sub... 90 1e-17
gb|OHS93604.1| hypothetical protein TRFO_40109 [Tritrichomonas f... 88 5e-17
ref|XP_001436180.1| hypothetical protein [Paramecium tetraurelia... 87 1e-16
>ref|XP_021981591.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1-like
[Helianthus annuus]
Length = 1794
Score = 164 bits (414), Expect = 2e-43
Identities = 94/202 (46%), Positives = 115/202 (56%), Gaps = 24/202 (11%)
Frame = +1
Query: 1 WGH--KAAKADETGWGSNNPQKDVEPSEPW---GTKKDDTAAAASGWGTKKPDTNTEKGS 165
WG K GWG+ QKDVEPS W G K+D+ WG+KK + T GS
Sbjct: 1323 WGGAVKTTPTTSAGWGTTKSQKDVEPSGSWSLSGEKEDNEPV----WGSKKSENKTAMGS 1378
Query: 166 ---SWGQKVAKADEAGWGSKKSD-DTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEK 333
SWGQ V K D GWG+KKSD +TE GSG+ WGQ V G E+ WGAK+ +NE K
Sbjct: 1379 GSGSWGQTVVKGDGPGWGAKKSDNETEEGSGA----WGQVVAKGDESRWGAKESQNEAAK 1434
Query: 334 GSGSGSWGQKAISKNESGWGTERTENEA-------------VWGSKKP--ETEKGSGSGS 468
GSG WGQK + ++ SGWG +++ENE VWGSK+ ET GSGSGS
Sbjct: 1435 ELGSGLWGQKVVKRDGSGWGGKKSENETGTWVQKASNWDEPVWGSKESVNETATGSGSGS 1494
Query: 469 WGQKVVSGKEGGWGADKLVNDS 534
WGQKVV+ E G K V+D+
Sbjct: 1495 WGQKVVTADEPRRGGKKSVDDT 1516
Score = 111 bits (278), Expect = 4e-25
Identities = 70/180 (38%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEP---SEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSW 171
WG AK DE+ WG+ Q + S WG K SGWG KK + T +W
Sbjct: 1411 WGQVVAKGDESRWGAKESQNEAAKELGSGLWGQKV--VKRDGSGWGGKKSENET---GTW 1465
Query: 172 GQKVAKADEAGWGSKKS-DDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSGSG 348
QK + DE WGSK+S ++T GSGS GSWGQKVV+ E G KK ++T KGSGS
Sbjct: 1466 VQKASNWDEPVWGSKESVNETATGSGS--GSWGQKVVTADEPRRGGKKSVDDTNKGSGSS 1523
Query: 349 SWGQKAISKNESGW-----GTERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKE--GGW 507
SWGQK + + GW G + K + E+ GS W K + GGW
Sbjct: 1524 SWGQKVVKSDGPGWNSKPGGPPMDCADGSTDEKGHDAEQKPGSWGWNHKAEQKPDEGGGW 1583
Score = 79.7 bits (195), Expect = 5e-14
Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +1
Query: 193 DEAGWGSKKSDDTENGSGSVAGSWGQ--KVVSGIEAGWGAKKMENETEKGSGSGSWGQKA 366
+++ WG+ + + SG G WG K AGWG K + + E SGSW
Sbjct: 1303 EQSTWGTGPTPEDGTSSG---GGWGGAVKTTPTTSAGWGTTKSQKDVEP---SGSWSLSG 1356
Query: 367 ISKNESGWGTERTENEAVWGSKKPE--TEKGSGSGSWGQKVVSGKEGGWGADKLVNDSE 537
E+ +NE VWGSKK E T GSGSGSWGQ VV G GWGA K N++E
Sbjct: 1357 ----------EKEDNEPVWGSKKSENKTAMGSGSGSWGQTVVKGDGPGWGAKKSDNETE 1405
>gb|OTG37776.1| putative DNA-directed RNA polymerase, subunit beta-prime [Helianthus
annuus]
Length = 1808
Score = 164 bits (414), Expect = 2e-43
Identities = 94/202 (46%), Positives = 115/202 (56%), Gaps = 24/202 (11%)
Frame = +1
Query: 1 WGH--KAAKADETGWGSNNPQKDVEPSEPW---GTKKDDTAAAASGWGTKKPDTNTEKGS 165
WG K GWG+ QKDVEPS W G K+D+ WG+KK + T GS
Sbjct: 1337 WGGAVKTTPTTSAGWGTTKSQKDVEPSGSWSLSGEKEDNEPV----WGSKKSENKTAMGS 1392
Query: 166 ---SWGQKVAKADEAGWGSKKSD-DTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEK 333
SWGQ V K D GWG+KKSD +TE GSG+ WGQ V G E+ WGAK+ +NE K
Sbjct: 1393 GSGSWGQTVVKGDGPGWGAKKSDNETEEGSGA----WGQVVAKGDESRWGAKESQNEAAK 1448
Query: 334 GSGSGSWGQKAISKNESGWGTERTENEA-------------VWGSKKP--ETEKGSGSGS 468
GSG WGQK + ++ SGWG +++ENE VWGSK+ ET GSGSGS
Sbjct: 1449 ELGSGLWGQKVVKRDGSGWGGKKSENETGTWVQKASNWDEPVWGSKESVNETATGSGSGS 1508
Query: 469 WGQKVVSGKEGGWGADKLVNDS 534
WGQKVV+ E G K V+D+
Sbjct: 1509 WGQKVVTADEPRRGGKKSVDDT 1530
Score = 111 bits (278), Expect = 4e-25
Identities = 70/180 (38%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEP---SEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSW 171
WG AK DE+ WG+ Q + S WG K SGWG KK + T +W
Sbjct: 1425 WGQVVAKGDESRWGAKESQNEAAKELGSGLWGQKV--VKRDGSGWGGKKSENET---GTW 1479
Query: 172 GQKVAKADEAGWGSKKS-DDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSGSG 348
QK + DE WGSK+S ++T GSGS GSWGQKVV+ E G KK ++T KGSGS
Sbjct: 1480 VQKASNWDEPVWGSKESVNETATGSGS--GSWGQKVVTADEPRRGGKKSVDDTNKGSGSS 1537
Query: 349 SWGQKAISKNESGW-----GTERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKE--GGW 507
SWGQK + + GW G + K + E+ GS W K + GGW
Sbjct: 1538 SWGQKVVKSDGPGWNSKPGGPPMDCADGSTDEKGHDAEQKPGSWGWNHKAEQKPDEGGGW 1597
Score = 79.7 bits (195), Expect = 5e-14
Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +1
Query: 193 DEAGWGSKKSDDTENGSGSVAGSWGQ--KVVSGIEAGWGAKKMENETEKGSGSGSWGQKA 366
+++ WG+ + + SG G WG K AGWG K + + E SGSW
Sbjct: 1317 EQSTWGTGPTPEDGTSSG---GGWGGAVKTTPTTSAGWGTTKSQKDVEP---SGSWSLSG 1370
Query: 367 ISKNESGWGTERTENEAVWGSKKPE--TEKGSGSGSWGQKVVSGKEGGWGADKLVNDSE 537
E+ +NE VWGSKK E T GSGSGSWGQ VV G GWGA K N++E
Sbjct: 1371 ----------EKEDNEPVWGSKKSENKTAMGSGSGSWGQTVVKGDGPGWGAKKSDNETE 1419
>ref|XP_022012121.1| DNA-directed RNA polymerase V subunit 1-like [Helianthus annuus]
Length = 2083
Score = 163 bits (413), Expect = 3e-43
Identities = 99/207 (47%), Positives = 120/207 (57%), Gaps = 30/207 (14%)
Frame = +1
Query: 1 WGHKAAKADE------TGWGSNNPQKDVEPSEPWGT--KKDDTAAAASGWGTKKPDTNTE 156
WG AK+D+ +GWG+ Q DVEPS WG+ KKDD SGWG K D TE
Sbjct: 1346 WGE--AKSDQGQQIGSSGWGATKSQNDVEPSGSWGSLGKKDDNQ---SGWGAKS-DNQTE 1399
Query: 157 KGSS-WGQKVAKADEAGWGSKKS---------------DDTENGSGSVAGSWGQKVVSGI 288
K S WG KV+K DE WG+KKS ++TE GSGS SWGQKVV+
Sbjct: 1400 KDSGGWGHKVSKGDEHAWGAKKSQNEGDGPGWGGNSSRNNTEKGSGS---SWGQKVVAAD 1456
Query: 289 EAGWGAKKMENETEKGSGSGSWGQKAISKN--ESGWGTER-TENEAVWGSKKPE--TEKG 453
E GWG KK E +T K SGSGSWGQK ++ SGWG + E+E+ WG KK + T K
Sbjct: 1457 EPGWGGKKNETDTNKNSGSGSWGQKVFTETGLGSGWGQKSVAEDESGWGGKKSDFNTNKN 1516
Query: 454 SGSGSWGQKVVSGKEG-GWGADKLVND 531
SG+GSWGQKV++ G GWG + D
Sbjct: 1517 SGAGSWGQKVITEDSGSGWGQKAVTAD 1543
Score = 157 bits (397), Expect = 4e-41
Identities = 96/220 (43%), Positives = 113/220 (51%), Gaps = 50/220 (22%)
Frame = +1
Query: 1 WGHKAAKADE--------------TGWGSNNPQKDVEPSE--PWGTKKDDTAAAASGWGT 132
WGHK +K DE GWG N+ + + E WG K AA GWG
Sbjct: 1405 WGHKVSKGDEHAWGAKKSQNEGDGPGWGGNSSRNNTEKGSGSSWGQKV--VAADEPGWGG 1462
Query: 133 KKPDTNTEK-----------------GSSWGQKVAKADEAGWGSKKSDDTENGSGSVAGS 261
KK +T+T K GS WGQK DE+GWG KKSD N S AGS
Sbjct: 1463 KKNETDTNKNSGSGSWGQKVFTETGLGSGWGQKSVAEDESGWGGKKSDFNTN-KNSGAGS 1521
Query: 262 WGQKV-------------VSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNESG--WGT 396
WGQKV V+ E GWG KK + +T K SG+G+WGQKAI++ +SG WG
Sbjct: 1522 WGQKVITEDSGSGWGQKAVTADEPGWGKKKSQTDTNKSSGAGTWGQKAITEKDSGSGWGQ 1581
Query: 397 -ERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKEG-GWG 510
E T +E WG KK ET+K SGSG WGQKVV G GWG
Sbjct: 1582 KEVTADEPGWGGKKSETDKSSGSGMWGQKVVIEDSGSGWG 1621
Score = 143 bits (361), Expect = 3e-36
Identities = 89/219 (40%), Positives = 104/219 (47%), Gaps = 48/219 (21%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEP---SEPWGTK------------KDDTAAAASGWGTK 135
WG K ADE GWG + D S WG K + A SGWG K
Sbjct: 1448 WGQKVVAADEPGWGGKKNETDTNKNSGSGSWGQKVFTETGLGSGWGQKSVAEDESGWGGK 1507
Query: 136 KPDTNTEK----------------GSSWGQKVAKADEAGWGSKKSD-DTENGSGS----- 249
K D NT K GS WGQK ADE GWG KKS DT SG+
Sbjct: 1508 KSDFNTNKNSGAGSWGQKVITEDSGSGWGQKAVTADEPGWGKKKSQTDTNKSSGAGTWGQ 1567
Query: 250 -------VAGSWGQKVVSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNE-SGWGTERT 405
WGQK V+ E GWG KK +ET+K SGSG WGQK + ++ SGWG +
Sbjct: 1568 KAITEKDSGSGWGQKEVTADEPGWGGKK--SETDKSSGSGMWGQKVVIEDSGSGWGKKVV 1625
Query: 406 E-NEAVWGSKKPETE--KGSGSGSWGQKVVSGKEGGWGA 513
+E WG KK ET+ K SG+G+WGQKVV GW +
Sbjct: 1626 PADEPGWGGKKSETDTNKSSGAGTWGQKVVKSDGPGWNS 1664
Score = 131 bits (330), Expect = 4e-32
Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQK 180
WG KA ADE GWG Q D S GT WG +K T + GS WGQK
Sbjct: 1535 WGQKAVTADEPGWGKKKSQTDTNKSSGAGT-----------WG-QKAITEKDSGSGWGQK 1582
Query: 181 VAKADEAGWGSKKSD-DTENGSG---------SVAGSWGQKVVSGIEAGWGAKKMENETE 330
ADE GWG KKS+ D +GSG WG+KVV E GWG KK E +T
Sbjct: 1583 EVTADEPGWGGKKSETDKSSGSGMWGQKVVIEDSGSGWGKKVVPADEPGWGGKKSETDTN 1642
Query: 331 KGSGSGSWGQKAISKNESGWGTERTE-------NEAVWGSKKPETEKGSGSGSWG 474
K SG+G+WGQK + + GW ++ +E N+ WG K G S SWG
Sbjct: 1643 KSSGAGTWGQKVVKSDGPGWNSKSSEPVDQTGPNDGQWGKKDSWNAAGGSSSSWG 1697
Score = 93.2 bits (230), Expect = 1e-18
Identities = 68/193 (35%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Frame = +1
Query: 25 DETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADE-- 198
+ +GWG+ +D S WG T GWG +T T G WG+ AK+D+
Sbjct: 1299 EPSGWGTGPVPEDGTSSGGWGAAIKTTPTTGGGWGDAMKNTPTT-GGGWGE--AKSDQGQ 1355
Query: 199 ----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSGSGSWGQKA 366
+GWG+ KS + SGS GS G+K ++GWGAK +N+TEK
Sbjct: 1356 QIGSSGWGATKSQNDVEPSGSW-GSLGKK--DDNQSGWGAKS-DNQTEK----------- 1400
Query: 367 ISKNESGWGTERTE-NEAVWGSKKPE----------------TEKGSGSGSWGQKVVSGK 495
+ GWG + ++ +E WG+KK + TEKGSGS SWGQKVV+
Sbjct: 1401 ---DSGGWGHKVSKGDEHAWGAKKSQNEGDGPGWGGNSSRNNTEKGSGS-SWGQKVVAAD 1456
Query: 496 EGGWGADKLVNDS 534
E GWG K D+
Sbjct: 1457 EPGWGGKKNETDT 1469
>gb|OTF95291.1| putative nuclear RNA polymerase D1B [Helianthus annuus]
Length = 2146
Score = 163 bits (413), Expect = 3e-43
Identities = 99/207 (47%), Positives = 120/207 (57%), Gaps = 30/207 (14%)
Frame = +1
Query: 1 WGHKAAKADE------TGWGSNNPQKDVEPSEPWGT--KKDDTAAAASGWGTKKPDTNTE 156
WG AK+D+ +GWG+ Q DVEPS WG+ KKDD SGWG K D TE
Sbjct: 1409 WGE--AKSDQGQQIGSSGWGATKSQNDVEPSGSWGSLGKKDDNQ---SGWGAKS-DNQTE 1462
Query: 157 KGSS-WGQKVAKADEAGWGSKKS---------------DDTENGSGSVAGSWGQKVVSGI 288
K S WG KV+K DE WG+KKS ++TE GSGS SWGQKVV+
Sbjct: 1463 KDSGGWGHKVSKGDEHAWGAKKSQNEGDGPGWGGNSSRNNTEKGSGS---SWGQKVVAAD 1519
Query: 289 EAGWGAKKMENETEKGSGSGSWGQKAISKN--ESGWGTER-TENEAVWGSKKPE--TEKG 453
E GWG KK E +T K SGSGSWGQK ++ SGWG + E+E+ WG KK + T K
Sbjct: 1520 EPGWGGKKNETDTNKNSGSGSWGQKVFTETGLGSGWGQKSVAEDESGWGGKKSDFNTNKN 1579
Query: 454 SGSGSWGQKVVSGKEG-GWGADKLVND 531
SG+GSWGQKV++ G GWG + D
Sbjct: 1580 SGAGSWGQKVITEDSGSGWGQKAVTAD 1606
Score = 157 bits (397), Expect = 4e-41
Identities = 96/220 (43%), Positives = 113/220 (51%), Gaps = 50/220 (22%)
Frame = +1
Query: 1 WGHKAAKADE--------------TGWGSNNPQKDVEPSE--PWGTKKDDTAAAASGWGT 132
WGHK +K DE GWG N+ + + E WG K AA GWG
Sbjct: 1468 WGHKVSKGDEHAWGAKKSQNEGDGPGWGGNSSRNNTEKGSGSSWGQKV--VAADEPGWGG 1525
Query: 133 KKPDTNTEK-----------------GSSWGQKVAKADEAGWGSKKSDDTENGSGSVAGS 261
KK +T+T K GS WGQK DE+GWG KKSD N S AGS
Sbjct: 1526 KKNETDTNKNSGSGSWGQKVFTETGLGSGWGQKSVAEDESGWGGKKSDFNTN-KNSGAGS 1584
Query: 262 WGQKV-------------VSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNESG--WGT 396
WGQKV V+ E GWG KK + +T K SG+G+WGQKAI++ +SG WG
Sbjct: 1585 WGQKVITEDSGSGWGQKAVTADEPGWGKKKSQTDTNKSSGAGTWGQKAITEKDSGSGWGQ 1644
Query: 397 -ERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKEG-GWG 510
E T +E WG KK ET+K SGSG WGQKVV G GWG
Sbjct: 1645 KEVTADEPGWGGKKSETDKSSGSGMWGQKVVIEDSGSGWG 1684
Score = 143 bits (361), Expect = 3e-36
Identities = 89/219 (40%), Positives = 104/219 (47%), Gaps = 48/219 (21%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEP---SEPWGTK------------KDDTAAAASGWGTK 135
WG K ADE GWG + D S WG K + A SGWG K
Sbjct: 1511 WGQKVVAADEPGWGGKKNETDTNKNSGSGSWGQKVFTETGLGSGWGQKSVAEDESGWGGK 1570
Query: 136 KPDTNTEK----------------GSSWGQKVAKADEAGWGSKKSD-DTENGSGS----- 249
K D NT K GS WGQK ADE GWG KKS DT SG+
Sbjct: 1571 KSDFNTNKNSGAGSWGQKVITEDSGSGWGQKAVTADEPGWGKKKSQTDTNKSSGAGTWGQ 1630
Query: 250 -------VAGSWGQKVVSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNE-SGWGTERT 405
WGQK V+ E GWG KK +ET+K SGSG WGQK + ++ SGWG +
Sbjct: 1631 KAITEKDSGSGWGQKEVTADEPGWGGKK--SETDKSSGSGMWGQKVVIEDSGSGWGKKVV 1688
Query: 406 E-NEAVWGSKKPETE--KGSGSGSWGQKVVSGKEGGWGA 513
+E WG KK ET+ K SG+G+WGQKVV GW +
Sbjct: 1689 PADEPGWGGKKSETDTNKSSGAGTWGQKVVKSDGPGWNS 1727
Score = 131 bits (330), Expect = 4e-32
Identities = 71/175 (40%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQK 180
WG KA ADE GWG Q D S GT WG +K T + GS WGQK
Sbjct: 1598 WGQKAVTADEPGWGKKKSQTDTNKSSGAGT-----------WG-QKAITEKDSGSGWGQK 1645
Query: 181 VAKADEAGWGSKKSD-DTENGSG---------SVAGSWGQKVVSGIEAGWGAKKMENETE 330
ADE GWG KKS+ D +GSG WG+KVV E GWG KK E +T
Sbjct: 1646 EVTADEPGWGGKKSETDKSSGSGMWGQKVVIEDSGSGWGKKVVPADEPGWGGKKSETDTN 1705
Query: 331 KGSGSGSWGQKAISKNESGWGTERTE-------NEAVWGSKKPETEKGSGSGSWG 474
K SG+G+WGQK + + GW ++ +E N+ WG K G S SWG
Sbjct: 1706 KSSGAGTWGQKVVKSDGPGWNSKSSEPVDQTGPNDGQWGKKDSWNAAGGSSSSWG 1760
Score = 93.2 bits (230), Expect = 1e-18
Identities = 68/193 (35%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Frame = +1
Query: 25 DETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADE-- 198
+ +GWG+ +D S WG T GWG +T T G WG+ AK+D+
Sbjct: 1362 EPSGWGTGPVPEDGTSSGGWGAAIKTTPTTGGGWGDAMKNTPTT-GGGWGE--AKSDQGQ 1418
Query: 199 ----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSGSGSWGQKA 366
+GWG+ KS + SGS GS G+K ++GWGAK +N+TEK
Sbjct: 1419 QIGSSGWGATKSQNDVEPSGSW-GSLGKK--DDNQSGWGAKS-DNQTEK----------- 1463
Query: 367 ISKNESGWGTERTE-NEAVWGSKKPE----------------TEKGSGSGSWGQKVVSGK 495
+ GWG + ++ +E WG+KK + TEKGSGS SWGQKVV+
Sbjct: 1464 ---DSGGWGHKVSKGDEHAWGAKKSQNEGDGPGWGGNSSRNNTEKGSGS-SWGQKVVAAD 1519
Query: 496 EGGWGADKLVNDS 534
E GWG K D+
Sbjct: 1520 EPGWGGKKNETDT 1532
>emb|CDY07630.1| BnaA03g18810D [Brassica napus]
Length = 2292
Score = 109 bits (272), Expect = 3e-24
Identities = 73/208 (35%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASG--WGTK-KPDTNTEKGS-- 165
WG +A K ET G+ W KK +T + G WG++ K ++ TE GS
Sbjct: 1887 WGSQAKKNSETESGAC-----ASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGA 1941
Query: 166 -SWGQKVAKADEAG----WGSKKSDDTENGSGSVAGSWGQK---VVSGIEAGWGAKKMEN 321
+WG+K + + G WGS+ +++E SGS A +WG+K SG A WG++ N
Sbjct: 1942 AAWGKKKPETESGGGGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGAAWGSQAKNN 2001
Query: 322 -ETEKGSGSGSWGQKAISKNESG---WGTERTENE--------AVWGSKKPETEKGSGSG 465
ETE GSG+ +WG+K G WG++ N A WG KKPETE G G
Sbjct: 2002 SETESGSGAAAWGKKKPETESGGGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGGA 2061
Query: 466 SWGQKVVSGKEGGWGA----DKLVNDSE 537
+WG + E GA K N+SE
Sbjct: 2062 AWGSQAKKNSESQLGAANWGSKDTNNSE 2089
Score = 102 bits (254), Expect = 7e-22
Identities = 73/201 (36%), Positives = 104/201 (51%), Gaps = 31/201 (15%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASG--WGTK-KPDTNTEKGS-- 165
WG +A ET GS + WG KK +T + G WG++ K ++ TE GS
Sbjct: 1925 WGSQAKNNSETESGSG--------AAAWGKKKPETESGGGGAAWGSQAKNNSETESGSGA 1976
Query: 166 -SWGQKVAKADEAG---WGSKKSDDTENGSGSVAGSWGQK---VVSGIEAGWGAK-KMEN 321
+WG+K + + G WGS+ +++E SGS A +WG+K SG A WG++ K +
Sbjct: 1977 AAWGKKKPETESGGGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGAAWGSQAKNNS 2036
Query: 322 ETEKGSGSGSWGQKAISKNESG-----WGTERTENE------AVWGSKKP-ETEKGSGSG 465
ETE GSG+ +WG+K + ESG WG++ +N A WGSK +E GS S
Sbjct: 2037 ETESGSGAAAWGKKK-PETESGGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDSA 2095
Query: 466 SWGQKVVSGKE------GGWG 510
+WG+K S E G WG
Sbjct: 2096 AWGKKKNSEAEPTSVAWGSWG 2116
Score = 87.0 bits (214), Expect = 2e-16
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 68/212 (32%)
Frame = +1
Query: 82 WGTKKD-----DTAAAASGWGT--KKPDTNTEKGSSWGQKVAK----------------- 189
WG++ ++ + A+ WGT KK G +WG + K
Sbjct: 1851 WGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAWGSQAKKNSETESGACASTWGAWD 1910
Query: 190 ---------ADEAGWGSKKSDDTENGSGSVAGSWGQK----VVSGIEAGWGAK-KMENET 327
D A WGS+ +++E SGS A +WG+K G A WG++ K +ET
Sbjct: 1911 KKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGGAAWGSQAKNNSET 1970
Query: 328 EKGSGSGSWGQKAISKNESG----WGTERTENE--------AVWGSKKP----------- 438
E GSG+ +WG+K + ESG WG++ N A WG KKP
Sbjct: 1971 ESGSGAAAWGKKK-PETESGGGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGAAWG 2029
Query: 439 -------ETEKGSGSGSWGQKVVSGKEGGWGA 513
ETE GSG+ +WG+K + GG GA
Sbjct: 2030 SQAKNNSETESGSGAAAWGKKKPETESGGGGA 2061
Score = 73.6 bits (179), Expect = 7e-12
Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 28/140 (20%)
Frame = +1
Query: 199 AGWGSKKSDDTENGSGSVAGSWG--QKVVSGIEAG---WGAK-KMENETEKGSGSGSWG- 357
A WGS+ + +E SGS A +WG K S E+G WG++ K +ETE G+ + +WG
Sbjct: 1849 AAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAWGSQAKKNSETESGACASTWGA 1908
Query: 358 -QKAISKNESG-----WGTERTENE--------AVWGSKKPETEKGSGSGSWGQKVVSGK 495
K + ESG WG++ N A WG KKPETE G G +WG + +
Sbjct: 1909 WDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGGAAWGSQAKNNS 1968
Query: 496 E-------GGWGADKLVNDS 534
E WG K +S
Sbjct: 1969 ETESGSGAAAWGKKKPETES 1988
Score = 70.1 bits (170), Expect = 1e-10
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 28/200 (14%)
Frame = +1
Query: 1 WGHKAAKADET-------GWGSNNPQKDVEPSEPWGTK-----KDDTAAAASGWGTKKPD 144
WG +A ET WG P+ + WG++ + ++ + A+ WG KKP+
Sbjct: 1994 WGSQAKNNSETESGSGAAAWGKKKPETESGGGAAWGSQAKNNSETESGSGAAAWGKKKPE 2053
Query: 145 TNTEKG-SSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAGWGA 306
T + G ++WG + K E A WGSK ++++ENGS S A WG
Sbjct: 2054 TESGGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDS--------------AAWGK 2099
Query: 307 KKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPET---EKGSGSGSWG- 474
KK GSWGQ + ++ + ++ W S K ++G+ + WG
Sbjct: 2100 KKNSEAEPTSVAWGSWGQPSPPASDK---DAQEDDGNPWVSLKATNSGEKEGNETSQWGV 2156
Query: 475 ------QKVVSGKEGGWGAD 516
+ GG GAD
Sbjct: 2157 PNKRYPSAGSQSQGGGGGAD 2176
>ref|XP_022571716.1| DNA-directed RNA polymerase V subunit 1-like isoform X1 [Brassica
napus]
Length = 2059
Score = 97.1 bits (240), Expect = 5e-20
Identities = 70/236 (29%), Positives = 100/236 (42%), Gaps = 58/236 (24%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPSEP----WGTKKDD----------------- 102
WG K ET WGS K+ EP+ WG K +
Sbjct: 1470 WGSTNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSE 1529
Query: 103 TAAAASGWGTKKPDTNTEKG-SSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSW 264
T + A GW ++ P T+ G ++WG + E A WGS+ ++ E+ SGS A +W
Sbjct: 1530 TESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAW 1589
Query: 265 GQKVVSGIEAG--WGAK-KMENETEKGSGSGSWG--QKAISKNESG---WGTERTENE-- 414
G+K G WG++ K ++E E GSG+ +WG K S+ ESG WG++ +N
Sbjct: 1590 GKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAWGSQAKKNSET 1649
Query: 415 ---------AVWGSKKPETEKGSGSGSWGQKVVSGKE-------GGWGADKLVNDS 534
W KKPETE G +WG + + E WG K +S
Sbjct: 1650 ESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKKKPETES 1705
Score = 93.6 bits (231), Expect = 8e-19
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 41/220 (18%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPS-EPWGTK---KDDTAAAASGWGTK-KPDTN 150
WG++ + ET GW S NP + + WG++ K +T + + WG++ K +
Sbjct: 1520 WGNRGKRVSETESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFE 1579
Query: 151 TEKGS---SWGQKVAKADEAG--WGSKKSDDTENGSGSVAGSWG--QKVVSGIEAG---W 300
+E GS +WG+K + + G WGS+ + +E SGS A +WG K S E+G W
Sbjct: 1580 SESGSGAAAWGKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAW 1639
Query: 301 GAKKMEN-ETEKGSGSGSWG--QKAISKNESG-----WGTERTENE--------AVWGSK 432
G++ +N ETE G+ + +WG K + ESG WG++ N A WG K
Sbjct: 1640 GSQAKKNSETESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKK 1699
Query: 433 KPETEKGSGSG-SWGQKVVSGKEGGWGA----DKLVNDSE 537
KPET SG G +WG + E GA K N+SE
Sbjct: 1700 KPET--ESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSE 1737
Score = 89.4 bits (220), Expect = 2e-17
Identities = 70/224 (31%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWG-TKKPDTNTEK-GSSWG 174
WG KA + WG N + + P+ WG ++ +AA+ WG T K +T TE + WG
Sbjct: 1415 WGPKAVS--DKPWGKKNSETEPAPAA-WGKTNSESESAAAAWGSTNKKNTGTESDAAGWG 1471
Query: 175 QKVAK-----ADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG--WGAK-KMENETE 330
K +D WGS + + + GSWG+K + G WG + K +ETE
Sbjct: 1472 STNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSETE 1531
Query: 331 KG--------------SGSGSWGQKAISK--NESG---WGTERTEN--------EAVWGS 429
G SG +WG + SK ESG WG++ N A WG
Sbjct: 1532 SGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAWGK 1591
Query: 430 KKPETEKGSGSGSWGQKVVSGKE-------GGWGA-DKLVNDSE 537
KKPETE SG +WG + + E WG DK +++E
Sbjct: 1592 KKPETE--SGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETE 1633
Score = 68.9 bits (167), Expect = 3e-10
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Frame = +1
Query: 1 WGHKAAKADETG-------WGSNNPQKDVEPS----EPWGTK-----KDDTAAAASGWGT 132
WG +A K ET WG+ + +K S WG++ + ++ + A+ WG
Sbjct: 1639 WGSQAKKNSETESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGK 1698
Query: 133 KKPDTNTEKGSSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG 297
KKP+T + G++WG + K E A WGSK ++++ENGS S A
Sbjct: 1699 KKPETESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDS--------------AA 1744
Query: 298 WGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPET---EKGSGSGS 468
WG KK GSWGQ + ++ + ++ W S K ++G+ +
Sbjct: 1745 WGKKKNTEAEPTSVAWGSWGQPSPPASDK---DAQEDDGNPWVSLKATNSGEKEGNETSQ 1801
Query: 469 WG-------QKVVSGKEGGWGAD 516
WG + GG GAD
Sbjct: 1802 WGVPNKRYPSAGSQSQGGGGGAD 1824
>ref|XP_013734544.1| DNA-directed RNA polymerase V subunit 1-like isoform X2 [Brassica
napus]
Length = 2059
Score = 97.1 bits (240), Expect = 5e-20
Identities = 70/236 (29%), Positives = 100/236 (42%), Gaps = 58/236 (24%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPSEP----WGTKKDD----------------- 102
WG K ET WGS K+ EP+ WG K +
Sbjct: 1470 WGSTNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSE 1529
Query: 103 TAAAASGWGTKKPDTNTEKG-SSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSW 264
T + A GW ++ P T+ G ++WG + E A WGS+ ++ E+ SGS A +W
Sbjct: 1530 TESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAW 1589
Query: 265 GQKVVSGIEAG--WGAK-KMENETEKGSGSGSWG--QKAISKNESG---WGTERTENE-- 414
G+K G WG++ K ++E E GSG+ +WG K S+ ESG WG++ +N
Sbjct: 1590 GKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAWGSQAKKNSET 1649
Query: 415 ---------AVWGSKKPETEKGSGSGSWGQKVVSGKE-------GGWGADKLVNDS 534
W KKPETE G +WG + + E WG K +S
Sbjct: 1650 ESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKKKPETES 1705
Score = 93.6 bits (231), Expect = 8e-19
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 41/220 (18%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPS-EPWGTK---KDDTAAAASGWGTK-KPDTN 150
WG++ + ET GW S NP + + WG++ K +T + + WG++ K +
Sbjct: 1520 WGNRGKRVSETESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFE 1579
Query: 151 TEKGS---SWGQKVAKADEAG--WGSKKSDDTENGSGSVAGSWG--QKVVSGIEAG---W 300
+E GS +WG+K + + G WGS+ + +E SGS A +WG K S E+G W
Sbjct: 1580 SESGSGAAAWGKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAW 1639
Query: 301 GAKKMEN-ETEKGSGSGSWG--QKAISKNESG-----WGTERTENE--------AVWGSK 432
G++ +N ETE G+ + +WG K + ESG WG++ N A WG K
Sbjct: 1640 GSQAKKNSETESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKK 1699
Query: 433 KPETEKGSGSG-SWGQKVVSGKEGGWGA----DKLVNDSE 537
KPET SG G +WG + E GA K N+SE
Sbjct: 1700 KPET--ESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSE 1737
Score = 89.4 bits (220), Expect = 2e-17
Identities = 70/224 (31%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWG-TKKPDTNTEK-GSSWG 174
WG KA + WG N + + P+ WG ++ +AA+ WG T K +T TE + WG
Sbjct: 1415 WGPKAVS--DKPWGKKNSETEPAPAA-WGKTNSESESAAAAWGSTNKKNTGTESDAAGWG 1471
Query: 175 QKVAK-----ADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG--WGAK-KMENETE 330
K +D WGS + + + GSWG+K + G WG + K +ETE
Sbjct: 1472 STNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSETE 1531
Query: 331 KG--------------SGSGSWGQKAISK--NESG---WGTERTEN--------EAVWGS 429
G SG +WG + SK ESG WG++ N A WG
Sbjct: 1532 SGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAWGK 1591
Query: 430 KKPETEKGSGSGSWGQKVVSGKE-------GGWGA-DKLVNDSE 537
KKPETE SG +WG + + E WG DK +++E
Sbjct: 1592 KKPETE--SGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETE 1633
Score = 69.3 bits (168), Expect = 2e-10
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Frame = +1
Query: 1 WGHKAAKADETG-------WGSNNPQKDVEPS----EPWGTK-----KDDTAAAASGWGT 132
WG +A K ET WG+ + +K S WG++ + ++ + A+ WG
Sbjct: 1639 WGSQAKKNSETESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGK 1698
Query: 133 KKPDTNTEKGSSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG 297
KKP+T + G++WG + K E A WGSK ++++ENGS S A
Sbjct: 1699 KKPETESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDS--------------AA 1744
Query: 298 WGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPET---EKGSGSGS 468
WG KK GSWGQ + ++ + ++ W S K ++G+ +
Sbjct: 1745 WGKKKNSEAEPTSVAWGSWGQPSPPASDK---DAQEDDGNPWVSLKATNSGEKEGNETSQ 1801
Query: 469 WG-------QKVVSGKEGGWGAD 516
WG + GG GAD
Sbjct: 1802 WGVPNKRYPSAGSQSQGGGGGAD 1824
>ref|XP_009133402.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Brassica rapa]
Length = 2059
Score = 97.1 bits (240), Expect = 5e-20
Identities = 70/236 (29%), Positives = 100/236 (42%), Gaps = 58/236 (24%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPSEP----WGTKKDD----------------- 102
WG K ET WGS K+ EP+ WG K +
Sbjct: 1470 WGSTNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSE 1529
Query: 103 TAAAASGWGTKKPDTNTEKG-SSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSW 264
T + A GW ++ P T+ G ++WG + E A WGS+ ++ E+ SGS A +W
Sbjct: 1530 TESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAW 1589
Query: 265 GQKVVSGIEAG--WGAK-KMENETEKGSGSGSWG--QKAISKNESG---WGTERTENE-- 414
G+K G WG++ K ++E E GSG+ +WG K S+ ESG WG++ +N
Sbjct: 1590 GKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAWGSQAKKNSET 1649
Query: 415 ---------AVWGSKKPETEKGSGSGSWGQKVVSGKE-------GGWGADKLVNDS 534
W KKPETE G +WG + + E WG K +S
Sbjct: 1650 ESGAGASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKKKPETES 1705
Score = 97.1 bits (240), Expect = 5e-20
Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 41/220 (18%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPS-EPWGTK---KDDTAAAASGWGTK-KPDTN 150
WG++ + ET GW S NP + + WG++ K +T + + WG++ K +
Sbjct: 1520 WGNRGKRVSETESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFE 1579
Query: 151 TEKGS---SWGQKVAKADEAG--WGSKKSDDTENGSGSVAGSWG--QKVVSGIEAG---W 300
+E GS +WG+K + + G WGS+ + +E SGS A +WG K S E+G W
Sbjct: 1580 SESGSGAAAWGKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAW 1639
Query: 301 GAKKMEN-ETEKGSGSGSWG--QKAISKNESG-----WGTERTENE--------AVWGSK 432
G++ +N ETE G+G+ +WG K + ESG WG++ N A WG K
Sbjct: 1640 GSQAKKNSETESGAGASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKK 1699
Query: 433 KPETEKGSGSG-SWGQKVVSGKEGGWGA----DKLVNDSE 537
KPET SG G +WG + E GA K N+SE
Sbjct: 1700 KPET--ESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSE 1737
Score = 89.4 bits (220), Expect = 2e-17
Identities = 70/224 (31%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWG-TKKPDTNTEK-GSSWG 174
WG KA + WG N + + P+ WG ++ +AA+ WG T K +T TE + WG
Sbjct: 1415 WGPKAVS--DKPWGKKNSETEPAPAA-WGKTNSESESAAAAWGSTNKKNTGTESDAAGWG 1471
Query: 175 QKVAK-----ADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG--WGAK-KMENETE 330
K +D WGS + + + GSWG+K + G WG + K +ETE
Sbjct: 1472 STNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSETE 1531
Query: 331 KG--------------SGSGSWGQKAISK--NESG---WGTERTEN--------EAVWGS 429
G SG +WG + SK ESG WG++ N A WG
Sbjct: 1532 SGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAWGK 1591
Query: 430 KKPETEKGSGSGSWGQKVVSGKE-------GGWGA-DKLVNDSE 537
KKPETE SG +WG + + E WG DK +++E
Sbjct: 1592 KKPETE--SGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETE 1633
Score = 69.3 bits (168), Expect = 2e-10
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Frame = +1
Query: 1 WGHKAAKADETG-------WGSNNPQKDVEPS----EPWGTK-----KDDTAAAASGWGT 132
WG +A K ET WG+ + +K S WG++ + ++ + A+ WG
Sbjct: 1639 WGSQAKKNSETESGAGASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGK 1698
Query: 133 KKPDTNTEKGSSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG 297
KKP+T + G++WG + K E A WGSK ++++ENGS S A
Sbjct: 1699 KKPETESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDS--------------AA 1744
Query: 298 WGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPET---EKGSGSGS 468
WG KK GSWGQ + ++ + ++ W S K ++G+ +
Sbjct: 1745 WGKKKNSEAEPTSVAWGSWGQPSPPASDK---DAQEDDGNPWVSLKATNSGEKEGNETSQ 1801
Query: 469 WG-------QKVVSGKEGGWGAD 516
WG + GG GAD
Sbjct: 1802 WGVPNKRYPSAGSQSQGGGGGAD 1824
>gb|OTG11416.1| putative polyribonucleotide nucleotidyltransferase [Helianthus
annuus]
Length = 1984
Score = 96.7 bits (239), Expect = 7e-20
Identities = 74/224 (33%), Positives = 84/224 (37%), Gaps = 52/224 (23%)
Frame = +1
Query: 4 GHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTA------AAASGWGTKKPDTNTEK-- 159
G AD GWG N + WG KK+D A A GWG K T T
Sbjct: 1463 GEAKVDADSGGWGGGNKSTEAGGGG-WGQKKNDDASDSKVDADGGGWGGGKKSTETGGSG 1521
Query: 160 ------GSSWGQK--------VAKADEAGWGSKKSDDTENGSG--SVAGSWGQK------ 273
G WGQK AD +GWGS K GSG S +G WGQK
Sbjct: 1522 GWSGGGGGGWGQKNNNDAGDTKVDADSSGWGSGKKSTEAGGSGGWSGSGGWGQKNNDDAS 1581
Query: 274 --VVSGIEAGWGAKKMENETE-----KGSGSGSWGQKAISKNESGWGTERTENEAVWGSK 432
G GWG+ K E G G G WGQK N+ G++ + WG
Sbjct: 1582 VSKADGDSGGWGSGKKSTEAGGSGGWSGGGGGGWGQKT---NDDASGSKVDVDSGGWGGG 1638
Query: 433 KPETEKG-----SGSGSWGQK----------VVSGKEGGWGADK 519
K TE G SG G WGQK GGWG+ K
Sbjct: 1639 KKSTEAGGSGGWSGGGGWGQKNSGAFGSGDANTETDNGGWGSKK 1682
Score = 79.3 bits (194), Expect = 7e-14
Identities = 71/211 (33%), Positives = 82/211 (38%), Gaps = 53/211 (25%)
Frame = +1
Query: 1 WGHKA--------AKADETGWGSNNPQKDVEPSEPW--------GTKKDDTA------AA 114
WG K AD GWG + S W G K ++ A A
Sbjct: 1488 WGQKKNDDASDSKVDADGGGWGGGKKSTETGGSGGWSGGGGGGWGQKNNNDAGDTKVDAD 1547
Query: 115 ASGWGTKKPDTNTEKGSS--------WGQK------VAKAD--EAGWGSKKSDDTENGSG 246
+SGWG+ K +TE G S WGQK V+KAD GWGS K GSG
Sbjct: 1548 SSGWGSGKK--STEAGGSGGWSGSGGWGQKNNDDASVSKADGDSGGWGSGKKSTEAGGSG 1605
Query: 247 SVAGS----WGQKV--------VSGIEAGWGAKKMENETEKG---SGSGSWGQKAISKNE 381
+G WGQK V GWG K E SG G WGQK
Sbjct: 1606 GWSGGGGGGWGQKTNDDASGSKVDVDSGGWGGGKKSTEAGGSGGWSGGGGWGQKNSGAFG 1665
Query: 382 SGWGTERTENEAVWGSKKPETEKGSGSGSWG 474
SG T+N WGSKK + + GSG WG
Sbjct: 1666 SGDANTETDNGG-WGSKK--SNEAGGSGGWG 1693
Score = 71.6 bits (174), Expect = 3e-11
Identities = 62/217 (28%), Positives = 74/217 (34%), Gaps = 49/217 (22%)
Frame = +1
Query: 4 GHKAAKADETGWGSNNPQKDV------EPSEPWGTKKDDTAAAAS------GWGTKKPDT 147
G AD +GWGS + S WG K +D A+ + GWG+ K T
Sbjct: 1540 GDTKVDADSSGWGSGKKSTEAGGSGGWSGSGGWGQKNNDDASVSKADGDSGGWGSGKKST 1599
Query: 148 NTEK--------GSSWGQKV--------AKADEAGWGSKKSDDTENGSG--SVAGSWGQK 273
G WGQK D GWG K GSG S G WGQK
Sbjct: 1600 EAGGSGGWSGGGGGGWGQKTNDDASGSKVDVDSGGWGGGKKSTEAGGSGGWSGGGGWGQK 1659
Query: 274 VVSGI----------EAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVW 423
GWG+KK + + GSG WG S N+ G G R
Sbjct: 1660 NSGAFGSGDANTETDNGGWGSKK----SNEAGGSGGWGG---SDNQDGGGRGRGRGRGRG 1712
Query: 424 GSKKPETEK---------GSGSGSWGQKVVSGKEGGW 507
+ T+ G G GSW G GGW
Sbjct: 1713 RGRGRGTDSDNDNQGSGYGGGGGSW------GGGGGW 1743
Score = 68.2 bits (165), Expect = 5e-10
Identities = 53/157 (33%), Positives = 64/157 (40%), Gaps = 11/157 (7%)
Frame = +1
Query: 82 WGTKKDDTAA-------AASGWGTKKPDTNTEKGSSW----GQKVAKADEAGWGSKKSDD 228
WG K D + A SGWG+KK +N GS W G +GWGSKKS++
Sbjct: 1839 WGQKNTDASGSGDANMDAGSGWGSKK--SNEAGGSGWSGGGGASGGGGGSSGWGSKKSNE 1896
Query: 229 TENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTE 408
GSG W SG G G+ E G G WGQ + SG G ++
Sbjct: 1897 A-GGSG-----WSGGGASG--GGGGSWGKNTEAGGNEGGGGWGQLNSGTSGSG-GADKDA 1947
Query: 409 NEAVWGSKKPETEKGSGSGSWGQKVVSGKEGGWGADK 519
+ WG S G WGQK G GWG K
Sbjct: 1948 ANSGWGGGG-----SSSGGGWGQKDKDG-NSGWGGSK 1978
Score = 65.1 bits (157), Expect = 6e-09
Identities = 54/195 (27%), Positives = 69/195 (35%), Gaps = 33/195 (16%)
Frame = +1
Query: 34 GWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGS 213
GWG ++ Q G + G G + D N + G G D GWG
Sbjct: 1370 GWGGSDDQDGGGRGRGRGRGRGRGRGRGRGRGDSEND-NQDSGFGGG-----GDAGGWGG 1423
Query: 214 KKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSG-------SGSW--GQKA 366
S SG +G W SG + WG K N+ GSG SG W G K+
Sbjct: 1424 GSSGGGGGWSGGDSGGWSAGASSGGGSSWGQK---NDDASGSGEAKVDADSGGWGGGNKS 1480
Query: 367 ISKNESGWGTERTENEA---------VWGSKKPETE-------KGSGSGSWGQK------ 480
GWG ++ ++ + WG K TE G G G WGQK
Sbjct: 1481 TEAGGGGWGQKKNDDASDSKVDADGGGWGGGKKSTETGGSGGWSGGGGGGWGQKNNNDAG 1540
Query: 481 --VVSGKEGGWGADK 519
V GWG+ K
Sbjct: 1541 DTKVDADSSGWGSGK 1555
Score = 61.2 bits (147), Expect = 1e-07
Identities = 48/177 (27%), Positives = 65/177 (36%), Gaps = 18/177 (10%)
Frame = +1
Query: 34 GWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGS 213
G G N + +G + GW + ++ G W + G G
Sbjct: 1761 GRGRANDSDNDNQDSGYGGGSGGWSGGGGGWSSG--GNGSDGGGGWSG--GRGGRGGRGG 1816
Query: 214 KKSDDTENGSGSV------AGSWGQKVVSG---------IEAGWGAKKMENETEKGSGSG 348
+ D +G GS GSWGQK +GWG+KK NE SG
Sbjct: 1817 RGGGDRSDGGGSSWGGGGGGGSWGQKNTDASGSGDANMDAGSGWGSKK-SNEAGGSGWSG 1875
Query: 349 SWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKE---GGWG 510
G SGWG++++ NEA G G GSWG+ +G GGWG
Sbjct: 1876 GGGASGGGGGSSGWGSKKS-NEAGGSGWSGGGASGGGGGSWGKNTEAGGNEGGGGWG 1931
Score = 59.3 bits (142), Expect = 6e-07
Identities = 50/173 (28%), Positives = 67/173 (38%), Gaps = 16/173 (9%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAA---------------SGWGTK 135
WG K D +G G N ++ WG+KK + A + SGWG+K
Sbjct: 1839 WGQK--NTDASGSGDAN----MDAGSGWGSKKSNEAGGSGWSGGGGASGGGGGSSGWGSK 1892
Query: 136 KPDTNTEKGSSWGQKVAKADEAG-WGSKKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKK 312
K +N GS W A G WG +TE G G WGQ + SG GA
Sbjct: 1893 K--SNEAGGSGWSGGGASGGGGGSWGK----NTEAGGNEGGGGWGQ-LNSGTSGSGGA-- 1943
Query: 313 MENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSGSGSW 471
+K + + WG S + GWG + + + WG K SG W
Sbjct: 1944 -----DKDAANSGWGGGG-SSSGGGWGQKDKDGNSGWGGSK------KSSGGW 1984
>ref|XP_021988778.1| transcription elongation factor SPT6 homolog [Helianthus annuus]
Length = 2083
Score = 96.7 bits (239), Expect = 7e-20
Identities = 74/224 (33%), Positives = 84/224 (37%), Gaps = 52/224 (23%)
Frame = +1
Query: 4 GHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTA------AAASGWGTKKPDTNTEK-- 159
G AD GWG N + WG KK+D A A GWG K T T
Sbjct: 1463 GEAKVDADSGGWGGGNKSTEAGGGG-WGQKKNDDASDSKVDADGGGWGGGKKSTETGGSG 1521
Query: 160 ------GSSWGQK--------VAKADEAGWGSKKSDDTENGSG--SVAGSWGQK------ 273
G WGQK AD +GWGS K GSG S +G WGQK
Sbjct: 1522 GWSGGGGGGWGQKNNNDAGDTKVDADSSGWGSGKKSTEAGGSGGWSGSGGWGQKNNDDAS 1581
Query: 274 --VVSGIEAGWGAKKMENETE-----KGSGSGSWGQKAISKNESGWGTERTENEAVWGSK 432
G GWG+ K E G G G WGQK N+ G++ + WG
Sbjct: 1582 VSKADGDSGGWGSGKKSTEAGGSGGWSGGGGGGWGQKT---NDDASGSKVDVDSGGWGGG 1638
Query: 433 KPETEKG-----SGSGSWGQK----------VVSGKEGGWGADK 519
K TE G SG G WGQK GGWG+ K
Sbjct: 1639 KKSTEAGGSGGWSGGGGWGQKNSGAFGSGDANTETDNGGWGSKK 1682
Score = 79.3 bits (194), Expect = 7e-14
Identities = 71/211 (33%), Positives = 82/211 (38%), Gaps = 53/211 (25%)
Frame = +1
Query: 1 WGHKA--------AKADETGWGSNNPQKDVEPSEPW--------GTKKDDTA------AA 114
WG K AD GWG + S W G K ++ A A
Sbjct: 1488 WGQKKNDDASDSKVDADGGGWGGGKKSTETGGSGGWSGGGGGGWGQKNNNDAGDTKVDAD 1547
Query: 115 ASGWGTKKPDTNTEKGSS--------WGQK------VAKAD--EAGWGSKKSDDTENGSG 246
+SGWG+ K +TE G S WGQK V+KAD GWGS K GSG
Sbjct: 1548 SSGWGSGKK--STEAGGSGGWSGSGGWGQKNNDDASVSKADGDSGGWGSGKKSTEAGGSG 1605
Query: 247 SVAGS----WGQKV--------VSGIEAGWGAKKMENETEKG---SGSGSWGQKAISKNE 381
+G WGQK V GWG K E SG G WGQK
Sbjct: 1606 GWSGGGGGGWGQKTNDDASGSKVDVDSGGWGGGKKSTEAGGSGGWSGGGGWGQKNSGAFG 1665
Query: 382 SGWGTERTENEAVWGSKKPETEKGSGSGSWG 474
SG T+N WGSKK + + GSG WG
Sbjct: 1666 SGDANTETDNGG-WGSKK--SNEAGGSGGWG 1693
Score = 72.0 bits (175), Expect = 2e-11
Identities = 62/219 (28%), Positives = 75/219 (34%), Gaps = 49/219 (22%)
Frame = +1
Query: 4 GHKAAKADETGWGSNNPQKDV------EPSEPWGTKKDDTAAAAS------GWGTKKPDT 147
G AD +GWGS + S WG K +D A+ + GWG+ K T
Sbjct: 1540 GDTKVDADSSGWGSGKKSTEAGGSGGWSGSGGWGQKNNDDASVSKADGDSGGWGSGKKST 1599
Query: 148 NTEK--------GSSWGQKV--------AKADEAGWGSKKSDDTENGSG--SVAGSWGQK 273
G WGQK D GWG K GSG S G WGQK
Sbjct: 1600 EAGGSGGWSGGGGGGWGQKTNDDASGSKVDVDSGGWGGGKKSTEAGGSGGWSGGGGWGQK 1659
Query: 274 VVSGI----------EAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVW 423
GWG+KK + + GSG WG S N+ G G R
Sbjct: 1660 NSGAFGSGDANTETDNGGWGSKK----SNEAGGSGGWGG---SDNQDGGGRGRGRGRGRG 1712
Query: 424 GSKKPETEK---------GSGSGSWGQKVVSGKEGGWGA 513
+ T+ G G GSW G GGW +
Sbjct: 1713 RGRGRGTDSDNDNQGSGYGGGGGSW------GGGGGWSS 1745
Score = 70.1 bits (170), Expect = 1e-10
Identities = 57/173 (32%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Frame = +1
Query: 82 WGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGSKKSDDTENGSGSVAGS 261
WG K D ASG G D N + GS WG K K++EAG +G G GS
Sbjct: 1919 WGQKNTD----ASGSG----DANMDAGSGWGSK--KSNEAGGSGWSGGGGASGGGG--GS 1966
Query: 262 WGQKVVSG---------IEAGWGAKKMENET---------EKGSGSGSWGQKAIS---KN 378
WGQK + +GWG+KK NE G G GSWG+ + +
Sbjct: 1967 WGQKNTNASGSGDANMDAGSGWGSKK-SNEAGGSGWSGGGASGGGGGSWGKNTEAGGNEG 2025
Query: 379 ESGWGTERTENEAVWGSKKPETEKG------SGSGSWGQKVVSGKEGGWGADK 519
GWG + G+ K G S G WGQK G GWG K
Sbjct: 2026 GGGWGQLNSGTSGSGGADKDAANSGWGGGGSSSGGGWGQKDKDG-NSGWGGSK 2077
Score = 66.2 bits (160), Expect = 2e-09
Identities = 56/197 (28%), Positives = 72/197 (36%), Gaps = 38/197 (19%)
Frame = +1
Query: 34 GWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGS 213
G G N + +G + GW + ++ G W + G G
Sbjct: 1841 GRGRANDSDNDNQDSGYGGGSGGWSGGGGGWSSG--GNGSDGGGGWSG--GRGGRGGRGG 1896
Query: 214 KKSDDTENGSGSV------AGSWGQKVVSG---------IEAGWGAKKMENET------- 327
+ D +G GS GSWGQK +GWG+KK NE
Sbjct: 1897 RGGGDRSDGGGSSWGGGGGGGSWGQKNTDASGSGDANMDAGSGWGSKK-SNEAGGSGWSG 1955
Query: 328 ---EKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSG----------SGS 468
G G GSWGQK + N SG G + + WGSKK GSG GS
Sbjct: 1956 GGGASGGGGGSWGQK--NTNASGSGDANMDAGSGWGSKKSNEAGGSGWSGGGASGGGGGS 2013
Query: 469 WGQKVVSGKE---GGWG 510
WG+ +G GGWG
Sbjct: 2014 WGKNTEAGGNEGGGGWG 2030
Score = 65.1 bits (157), Expect = 6e-09
Identities = 54/195 (27%), Positives = 69/195 (35%), Gaps = 33/195 (16%)
Frame = +1
Query: 34 GWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGS 213
GWG ++ Q G + G G + D N + G G D GWG
Sbjct: 1370 GWGGSDDQDGGGRGRGRGRGRGRGRGRGRGRGDSEND-NQDSGFGGG-----GDAGGWGG 1423
Query: 214 KKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSG-------SGSW--GQKA 366
S SG +G W SG + WG K N+ GSG SG W G K+
Sbjct: 1424 GSSGGGGGWSGGDSGGWSAGASSGGGSSWGQK---NDDASGSGEAKVDADSGGWGGGNKS 1480
Query: 367 ISKNESGWGTERTENEA---------VWGSKKPETE-------KGSGSGSWGQK------ 480
GWG ++ ++ + WG K TE G G G WGQK
Sbjct: 1481 TEAGGGGWGQKKNDDASDSKVDADGGGWGGGKKSTETGGSGGWSGGGGGGWGQKNNNDAG 1540
Query: 481 --VVSGKEGGWGADK 519
V GWG+ K
Sbjct: 1541 DTKVDADSSGWGSGK 1555
>gb|KVH94774.1| Nucleic acid-binding, OB-fold, partial [Cynara cardunculus var.
scolymus]
Length = 2111
Score = 95.1 bits (235), Expect = 2e-19
Identities = 57/149 (38%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Frame = +1
Query: 82 WGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGSKKSDDTENGSGSVAGS 261
WG K D A+SG G+ + G SWGQK + WG K SD G S GS
Sbjct: 1809 WGQKNSDGGGASSGGGSWGQKNSGGGGGSWGQKNSGGGGGSWGQKNSD---GGGESGGGS 1865
Query: 262 WGQKVVSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPE 441
WGQK G WG K + G G GSWGQ KN G G + WG K +
Sbjct: 1866 WGQKNNGGGGGSWGQKNSDGGGASGGGGGSWGQ----KNSDGGGASGGGGGS-WGQKNSD 1920
Query: 442 TEKGSGSGSWGQK------VVSGKEGGWG 510
SG GSWGQK G G WG
Sbjct: 1921 GGGASGGGSWGQKNSNGGGASGGGGGSWG 1949
Score = 90.1 bits (222), Expect = 1e-17
Identities = 67/195 (34%), Positives = 71/195 (36%), Gaps = 25/195 (12%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASG--WGTKKPDTNTEKGSSWG 174
WG K + WG N WG K D + G WG K N G SWG
Sbjct: 1826 WGQKNSGGGGGSWGQKNSGGG---GGSWGQKNSDGGGESGGGSWGQKN---NGGGGGSWG 1879
Query: 175 QKVAKADEAG------WGSKKSDDTENGSGSVAGSWGQKVVSGIEA----GWGAKKMENE 324
QK + A WG K SD SG GSWGQK G A WG K
Sbjct: 1880 QKNSDGGGASGGGGGSWGQKNSDGG-GASGGGGGSWGQKNSDGGGASGGGSWGQKNSNGG 1938
Query: 325 TEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPE-------TEKGSGSGSWGQK- 480
G G GSWGQ KN G G WG K + G G GSWGQK
Sbjct: 1939 GASGGGGGSWGQ----KNSDGGGASSGGGGGSWGQKNXQKNSDGGGASSGGGGGSWGQKN 1994
Query: 481 -----VVSGKEGGWG 510
SG G WG
Sbjct: 1995 SDGGGASSGGGGSWG 2009
Score = 83.2 bits (204), Expect = 3e-15
Identities = 60/181 (33%), Positives = 71/181 (39%), Gaps = 15/181 (8%)
Frame = +1
Query: 13 AAKADETGWGSNNP--QKDVEPSEPWG-TKKDDTAAAASGWGTKKPDTNTEKGSSWGQKV 183
A+ + GWG N D + WG +KK A A GW G SWGQK
Sbjct: 1610 ASGGGDGGWGQKNTTGSGDANHAIGWGGSKKSTEAEAIGGWS----GGGASGGGSWGQKN 1665
Query: 184 AKADEAG------WGSKKSDDTENGSGSVAGSWGQKVVS-GIEAGWGAKKMENETEKGSG 342
+ +A WG K S +G G GSWGQK G WG K + G G
Sbjct: 1666 SDGGDASGGGGGSWGQKNSGGGASGGGG--GSWGQKNSGDGGGGSWGQKNSDGGGASGGG 1723
Query: 343 SGSWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSGSGSWGQK-----VVSGKEGGW 507
GSWGQK+ + G + WG K G GSWGQK S G W
Sbjct: 1724 GGSWGQKSNDGGGASGGGGASGGGGSWGQKN----SAGGGGSWGQKNSDGGGASSGGGSW 1779
Query: 508 G 510
G
Sbjct: 1780 G 1780
Score = 82.0 bits (201), Expect = 8e-15
Identities = 61/200 (30%), Positives = 77/200 (38%), Gaps = 31/200 (15%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEP-------WGTKKDDTAAAASG-----WGTKKPD 144
WG K + G + QK+ WG K D A+SG WG K
Sbjct: 1914 WGQKNSDGGGASGGGSWGQKNSNGGGASGGGGGSWGQKNSDGGGASSGGGGGSWGQKNXQ 1973
Query: 145 TNTEKGS--------SWGQKVAKADEAG------WGSKKSDDTENGSGSVAGSWGQKVVS 282
N++ G SWGQK + A WG K SD SG GSWGQK
Sbjct: 1974 KNSDGGGASSGGGGGSWGQKNSDGGGASSGGGGSWGQKNSDGGGASSGG-GGSWGQKNSG 2032
Query: 283 GIEAGWGAKKMENETEKGSGSGSWGQK-----AISKNESGWGTERTENEAVWGSKKPETE 447
G WG K + G G GSWGQK +S G +++ + G+ +
Sbjct: 2033 GGGGNWGQKNSDGGGASGGGGGSWGQKNSEGGGVSGGGGGSWGQKSSGGSSSGAGDANKD 2092
Query: 448 KGSGSGSWGQKVVSGKEGGW 507
S SG WG +G GGW
Sbjct: 2093 ADSSSG-WGGSKKAGASGGW 2111
Score = 80.1 bits (196), Expect = 4e-14
Identities = 68/207 (32%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGW-----GTKKPDTNTEKGS 165
WG K A GS + KD + S G+KK A GW G +
Sbjct: 1561 WGEKNNGAS----GSGDANKDADSSGWGGSKKSSQAGGGGGWSGGASGGGDGGASGGGDG 1616
Query: 166 SWGQK----VAKADEA-GW-GSKKSDDTE------NGSGSVAGSWGQKVVSGIEAGWG-- 303
WGQK A+ A GW GSKKS + E G S GSWGQK G +A G
Sbjct: 1617 GWGQKNTTGSGDANHAIGWGGSKKSTEAEAIGGWSGGGASGGGSWGQKNSDGGDASGGGG 1676
Query: 304 ---AKKMENETEKGSGSGSWGQKAISKNESG-WGTERTENEAV-------WGSKKPETEK 450
+K G G GSWGQK G WG + ++ WG K +
Sbjct: 1677 GSWGQKNSGGGASGGGGGSWGQKNSGDGGGGSWGQKNSDGGGASGGGGGSWGQKSNDGGG 1736
Query: 451 GS-------GSGSWGQKVVSGKEGGWG 510
S G GSWGQK +G G WG
Sbjct: 1737 ASGGGGASGGGGSWGQKNSAGGGGSWG 1763
Score = 80.1 bits (196), Expect = 4e-14
Identities = 64/198 (32%), Positives = 74/198 (37%), Gaps = 28/198 (14%)
Frame = +1
Query: 1 WGHK------AAKADETGWGSNNPQKD-VEPSEPWGTKKDDTAAAASG----WGTKKPD- 144
WG K A+ WG N WG K + A+ G WG K D
Sbjct: 1896 WGQKNSDGGGASGGGGGSWGQKNSDGGGASGGGSWGQKNSNGGGASGGGGGSWGQKNSDG 1955
Query: 145 ---TNTEKGSSWGQKVAKADEAG-----------WGSKKSDDTENGSGSVAGSWGQKVVS 282
++ G SWGQK + + G WG K SD SG GSWGQK
Sbjct: 1956 GGASSGGGGGSWGQKNXQKNSDGGGASSGGGGGSWGQKNSDGGGASSGG-GGSWGQKNSD 2014
Query: 283 GIEAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPE--TEKGS 456
G A G + G G G+WGQ KN G G + WG K E G
Sbjct: 2015 GGGASSGGGGSWGQKNSGGGGGNWGQ----KNSDGGGASGGGGGS-WGQKNSEGGGVSGG 2069
Query: 457 GSGSWGQKVVSGKEGGWG 510
G GSWGQK G G G
Sbjct: 2070 GGGSWGQKSSGGSSSGAG 2087
Score = 79.3 bits (194), Expect = 7e-14
Identities = 65/199 (32%), Positives = 73/199 (36%), Gaps = 29/199 (14%)
Frame = +1
Query: 1 WGHKAAKADETG-WGSNNPQKDVEPSE---PWGTKKDDTAAAASG---------WGTKKP 141
WG K + G WG N WG K +D A+ G WG K
Sbjct: 1696 WGQKNSGDGGGGSWGQKNSDGGGASGGGGGSWGQKSNDGGGASGGGGASGGGGSWGQKN- 1754
Query: 142 DTNTEKGSSWGQK-----VAKADEAGWGSKKSD-----------DTENGSGSVAGSWGQK 273
+ G SWGQK A + WG K SD G+ S GSWGQK
Sbjct: 1755 --SAGGGGSWGQKNSDGGGASSGGGSWGQKNSDGGGXXXXXXXXXXGGGASSGGGSWGQK 1812
Query: 274 VVSGIEAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPETEKG 453
G A G + G G GSWGQ KN G G WG K +
Sbjct: 1813 NSDGGGASSGGGSW-GQKNSGGGGGSWGQ----KNSGGGG-------GSWGQKNSDGGGE 1860
Query: 454 SGSGSWGQKVVSGKEGGWG 510
SG GSWGQK G G WG
Sbjct: 1861 SGGGSWGQKNNGGGGGSWG 1879
>emb|CDY60335.1| BnaC03g72290D [Brassica napus]
Length = 1869
Score = 92.4 bits (228), Expect = 2e-18
Identities = 65/196 (33%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDV-----EPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGS 165
WG K A+ D + P DV +PWG K +T A + WG TN+E G+
Sbjct: 1393 WGTKPAQNDSVVIENGEPSSDVWGPKAVSDKPWGKKNSETEPAPAAWGK----TNSESGA 1448
Query: 166 SWGQKVAKADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIE-------AGWGA-KKMEN 321
+WG S+ E SG A WG + + E A WG K ++
Sbjct: 1449 TWG------------SRDKSKFETESGGAA--WGSQAKNNSETEPGSGAAAWGTWDKKKS 1494
Query: 322 ETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKEG 501
ETE G G +WG +A + +E TE A WG KKPETE G G+ +WG + E
Sbjct: 1495 ETESGGGGAAWGSQAKNNSE----TESGSGAAAWGKKKPETESGGGA-AWGSQAKKNSES 1549
Query: 502 GWGA----DKLVNDSE 537
GA K N+SE
Sbjct: 1550 QLGAANWGSKDTNNSE 1565
Score = 68.9 bits (167), Expect = 3e-10
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Frame = +1
Query: 1 WGHKAAKADET-------GWGSNNPQKDVEPS----EPWGTK-----KDDTAAAASGWGT 132
WG +A ET WG+ + +K S WG++ + ++ + A+ WG
Sbjct: 1467 WGSQAKNNSETEPGSGAAAWGTWDKKKSETESGGGGAAWGSQAKNNSETESGSGAAAWGK 1526
Query: 133 KKPDTNTEKGSSWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAG 297
KKP+T + G++WG + K E A WGSK ++++ENGS S A
Sbjct: 1527 KKPETESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDS--------------AA 1572
Query: 298 WGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPET---EKGSGSGS 468
WG KK GSWGQ + ++ + ++ W S K + ++G+ +
Sbjct: 1573 WGKKKNSEAEPTSVAWGSWGQPSPPASDK---DAQEDDGNPWVSLKATSSGDKEGNETSQ 1629
Query: 469 WG-------QKVVSGKEGGWGAD 516
WG + GG GAD
Sbjct: 1630 WGVPNKRYPSAGSQSQGGGGGAD 1652
>ref|XP_013717052.1| DNA-directed RNA polymerase V subunit 1-like [Brassica napus]
Length = 2032
Score = 92.4 bits (228), Expect = 2e-18
Identities = 74/240 (30%), Positives = 101/240 (42%), Gaps = 64/240 (26%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSN-NPQKDVEPSEP----WGTKKDDTAAAASGWGTK-KPDT 147
WG K ET WGS K+ EP+ WG K +T + + WG + K +
Sbjct: 1470 WGSTYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKSSETVSGGADWGNRGKRVS 1529
Query: 148 NTEKGS-----------------SWGQKVAKADE-----AGWGS--KKSDDTENGSGSVA 255
TE G+ +WG + E A WGS K + +TE GSG+ A
Sbjct: 1530 ETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSETEPGSGAAA 1589
Query: 256 -GSWGQKV----VSGIEAGWGAKKMEN-ETEKGSGSGSWG--QKAISKNESG---WGTER 402
G+W +K G A WG++ N ETE GSG+ +WG K S+ ESG WG++
Sbjct: 1590 LGTWDKKKPETETGGGGAAWGSQAKNNSETESGSGAAAWGTWDKKKSETESGGGAWGSQA 1649
Query: 403 TENE-----------AVWGSKKPETEKGSGSGSWGQKVVSGKE-------GGWGADKLVN 528
+N W KKPETE G G +WG + + E WG+ N
Sbjct: 1650 KKNSETESGAGASTWGAWDKKKPETESGGGGAAWGSQAKNNSETESGSGAAAWGSQAKKN 1709
Score = 87.0 bits (214), Expect = 2e-16
Identities = 75/248 (30%), Positives = 101/248 (40%), Gaps = 69/248 (27%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDV-----EPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGS 165
WG K A+ D + P DV +PWG K +T A + WG K + +
Sbjct: 1393 WGTKPAQNDSVVIENGEPSSDVWGPKAVSDKPWGKKNSETEPAPAAWG-KTNSESESAAA 1451
Query: 166 SWGQKVAK-----ADEAGWGS--KKSDDTEN-----GSG-----------SVAGSWGQKV 276
+WG K +D AGWGS KK+ +TE GSG + GSWG+K
Sbjct: 1452 AWGSDDEKNTGTESDAAGWGSTYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKS 1511
Query: 277 VSGIEAG--WGAK-KMENETEKG--------------SGSGSWGQKAISK--NESG---W 390
+ G WG + K +ETE G SG +WG + SK ESG W
Sbjct: 1512 SETVSGGADWGNRGKRVSETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAW 1571
Query: 391 GTERTENE-----------AVWGSKKPETEKGSGSGSWGQKVVSGKE-------GGWGA- 513
G++ N W KKPETE G G +WG + + E WG
Sbjct: 1572 GSQAKNNSETEPGSGAAALGTWDKKKPETETGGGGAAWGSQAKNNSETESGSGAAAWGTW 1631
Query: 514 DKLVNDSE 537
DK +++E
Sbjct: 1632 DKKKSETE 1639
Score = 71.6 bits (174), Expect = 3e-11
Identities = 62/200 (31%), Positives = 84/200 (42%), Gaps = 22/200 (11%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGT---KKDDTAAAASGWGTK-KPDTNTEKG-- 162
WG +A ET GS + WGT KK +T + WG++ K ++ TE G
Sbjct: 1609 WGSQAKNNSETESGSG--------AAAWGTWDKKKSETESGGGAWGSQAKKNSETESGAG 1660
Query: 163 -SSWGQKVAKADE-------AGWGSKKSDDTENGSGSVAGSWGQKVVSGIE-----AGWG 303
S+WG K E A WGS+ +++E SGS A +WG + E A WG
Sbjct: 1661 ASTWGAWDKKKPETESGGGGAAWGSQAKNNSETESGSGAAAWGSQAKKNSESQLGAANWG 1720
Query: 304 AKKMENETEKGSGSGSWGQKAISKNES---GWGTERTENEAVWGSKKPETEKGSGSGSWG 474
+K N +E GS S +WG+K S+ E W WG P G
Sbjct: 1721 SKD-TNNSENGSDSAAWGKKKNSEAEPTSVAW--------CSWGQPSPPASDKDAQEDDG 1771
Query: 475 QKVVSGKEGGWGADKLVNDS 534
VS K G DK N++
Sbjct: 1772 NPWVSLKATSSG-DKEGNET 1790
>ref|XP_018476063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Raphanus sativus]
Length = 2041
Score = 92.0 bits (227), Expect = 3e-18
Identities = 73/213 (34%), Positives = 105/213 (49%), Gaps = 34/213 (15%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTK-KPDTNTEKGSS--- 168
WG + ET GS W KK +T + + WG++ K ++ TE GSS
Sbjct: 1561 WGSQGRNNRETESGSGGAAWG-----SWDKKKPETESGGAAWGSQAKNNSETESGSSGAA 1615
Query: 169 ----WGQKVAKADEAG---WGS--KKSDDTENGSGSVAGSWGQKVVSGIEAG---WGAK- 309
W +K + + G WGS K + +TE+GSG A +WG+K S E+G WG++
Sbjct: 1616 AWGTWDKKKPETESGGGAAWGSQAKNNSETESGSG--AAAWGKK-KSETESGGAAWGSQA 1672
Query: 310 KMENETEKGSGSGSWGQKAISKNESG----WGTERTENE------AVWGSKKP-ETEKGS 456
K +ETE GSG+ +WG+K S+ ESG WG+ N A WGSK+ +E G+
Sbjct: 1673 KNNSETEAGSGASAWGKKK-SETESGGGAAWGSRDKNNSESQVGAANWGSKETNNSENGT 1731
Query: 457 GSGSWGQK------VVSGKEGGWGADKLVNDSE 537
S +WG+K SG G WG D++
Sbjct: 1732 DSAAWGKKKNVEAEPASGAWGSWGQPTPTADAQ 1764
Score = 84.0 bits (206), Expect = 2e-15
Identities = 69/225 (30%), Positives = 100/225 (44%), Gaps = 47/225 (20%)
Frame = +1
Query: 1 WG-----HKAAKADETGWGS---NNPQKDVEPSEPWGT---KKDDTAAAASGWGTKKPDT 147
WG + +D WGS NNP + + S WG+ +T A++ WG K +T
Sbjct: 1446 WGSSDKNNPGTNSDAAAWGSTNKNNPGTESDASA-WGSGTKMNKETEPASAAWGKKSSET 1504
Query: 148 NTEKGSSWGQKVAKADEA-----GWGSK-KSDDTENGSGSVAGSWGQKVVSGIE-----A 294
G+ WG + + E GW S+ KS +T++G + WG + S E +
Sbjct: 1505 -VSGGADWGNRSKRVSETESGAGGWASRNKSLETQSGGAT----WGSRDKSKFETESGGS 1559
Query: 295 GWGAKKMEN-ETEKGSGSGSWGQ--KAISKNESG---WGTERTENE---------AVWGS 429
WG++ N ETE GSG +WG K + ESG WG++ N A WG+
Sbjct: 1560 AWGSQGRNNRETESGSGGAAWGSWDKKKPETESGGAAWGSQAKNNSETESGSSGAAAWGT 1619
Query: 430 ---KKPETEKGSGSGSWGQKVVSGKE-------GGWGADKLVNDS 534
KKPETE G G+ +WG + + E WG K +S
Sbjct: 1620 WDKKKPETESGGGA-AWGSQAKNNSETESGSGAAAWGKKKSETES 1663
Score = 80.5 bits (197), Expect = 3e-14
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSE--PWGTKKDDTAAAASGWGT---KKPDTNTEKGS 165
WG KA + WG N + + P+ WG K +T + A+ WG+ P TN++ +
Sbjct: 1405 WGPKAVS--DKPWGKKNSETEPAPAAWGSWGKKNPETESGAAAWGSSDKNNPGTNSD-AA 1461
Query: 166 SWG-----QKVAKADEAGWGS--KKSDDTENGSGSVAGSWGQKVVSGIEAG--WGAK-KM 315
+WG ++D + WGS K + +TE S +WG+K + G WG + K
Sbjct: 1462 AWGSTNKNNPGTESDASAWGSGTKMNKETEPAS----AAWGKKSSETVSGGADWGNRSKR 1517
Query: 316 ENETEKGSGSGSWGQKAISKNESG--WGT------ERTENEAVWGSK---KPETEKGSGS 462
+ETE G+G + K++ G WG+ E + WGS+ ETE GSG
Sbjct: 1518 VSETESGAGGWASRNKSLETQSGGATWGSRDKSKFETESGGSAWGSQGRNNRETESGSGG 1577
Query: 463 ---GSWGQKVVSGKEGG--WGADKLVNDSE 537
GSW +K + GG WG+ + N+SE
Sbjct: 1578 AAWGSWDKKKPETESGGAAWGS-QAKNNSE 1606
>ref|XP_013628526.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Brassica oleracea var. oleracea]
Length = 2056
Score = 91.3 bits (225), Expect = 5e-18
Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 38/208 (18%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGT---KKDDTAAAASG--WGTK-KPDTNTEKG 162
WG +A ET GS + WGT KK +T G WG++ K ++ TE G
Sbjct: 1571 WGSQAKNNSETEPGSG--------AAAWGTWDKKKPETETGGGGAAWGSQAKNNSETESG 1622
Query: 163 SS------WGQKVAKAD--EAGWGS--KKSDDTENGSG-SVAGSWGQKV----VSGIEAG 297
SS W +K ++ + + WGS KK+ +TE+G+G S G+W +K G A
Sbjct: 1623 SSAAAWGTWDKKKSETELVDGAWGSQAKKNSETESGAGASTWGAWDKKKPETETGGGGAA 1682
Query: 298 WGAKKMEN-ETEKGSGSGSWGQKAISKNESG---WGTERTENE------AVWGSKKPE-T 444
WG++ N ETE GSG +WG+K + G WG++ +N A WGSK +
Sbjct: 1683 WGSQAKNNSETESGSGGAAWGKKKSETDSGGGAAWGSQAKKNSESQLGAANWGSKNTNNS 1742
Query: 445 EKGSGSGSWGQKVVSGKE------GGWG 510
E GS S +WG+K S E G WG
Sbjct: 1743 ENGSDSAAWGKKKNSEAEPTSVAWGSWG 1770
Score = 90.9 bits (224), Expect = 7e-18
Identities = 73/228 (32%), Positives = 101/228 (44%), Gaps = 49/228 (21%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTK-KPDTNTEKGSS-WG 174
WG KA + WG N + + P+ WG K ++ +AA+ WG+ K +T TE ++ WG
Sbjct: 1415 WGPKAVS--DKPWGKKNSETEPAPAA-WGKKNSESESAAAAWGSSDKKNTGTESDAAGWG 1471
Query: 175 QKVAKADE-----AGWGSKKSDDTENGSGSVA-GSWGQKVVSGIEAG--WGAK-KMENET 327
K E A WGS + E A GSWG+K + G WG + K +ET
Sbjct: 1472 SAYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKSSETVSGGADWGIRGKRVSET 1531
Query: 328 EKG--------------SGSGSWGQKAISK--NESG---WGTERTENE--------AVWG 426
E G SG +WG + SK ESG WG++ N A WG
Sbjct: 1532 ESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSETEPGSGAAAWG 1591
Query: 427 S---KKPETEKGSGSGSWGQKVVSGKE-------GGWGA-DKLVNDSE 537
+ KKPETE G G +WG + + E WG DK +++E
Sbjct: 1592 TWDKKKPETETGGGGAAWGSQAKNNSETESGSSAAAWGTWDKKKSETE 1639
Score = 90.9 bits (224), Expect = 7e-18
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPS-EPWGTK---KDDTAAAASGWGTK-KPDTN 150
WG + + ET GW S N + + WG++ K +T + + WG++ K ++
Sbjct: 1521 WGIRGKRVSETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSE 1580
Query: 151 TEKGS------SWGQKVAKADEAG----WGSKKSDDTENGSGSVAGSWG-----QKVVSG 285
TE GS +W +K + + G WGS+ +++E SGS A +WG +
Sbjct: 1581 TEPGSGAAAWGTWDKKKPETETGGGGAAWGSQAKNNSETESGSSAAAWGTWDKKKSETEL 1640
Query: 286 IEAGWGAKKMEN-ETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSK---KPETEKG 453
++ WG++ +N ETE G+G+ +WG K E TE A WGS+ ETE G
Sbjct: 1641 VDGAWGSQAKKNSETESGAGASTWGAWDKKKPE----TETGGGGAAWGSQAKNNSETESG 1696
Query: 454 SGSGSWGQKVVSGKEGG---WGADKLVN 528
SG +WG+K GG WG+ N
Sbjct: 1697 SGGAAWGKKKSETDSGGGAAWGSQAKKN 1724
Score = 89.7 bits (221), Expect = 2e-17
Identities = 74/242 (30%), Positives = 101/242 (41%), Gaps = 64/242 (26%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSN-NPQKDVEPSEP----WGTKKDDTAAAASGWGTK-KPDT 147
WG K ET WGS K+ EP+ WG K +T + + WG + K +
Sbjct: 1470 WGSAYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKSSETVSGGADWGIRGKRVS 1529
Query: 148 NTEKGS-----------------SWGQKVAKADE-----AGWGS--KKSDDTENGSGSVA 255
TE G+ +WG + E A WGS K + +TE GSG+ A
Sbjct: 1530 ETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSETEPGSGAAA 1589
Query: 256 -GSWGQKV----VSGIEAGWGAKKMEN-ETEKGSGSGSWGQKAISKNES-----GWGTER 402
G+W +K G A WG++ N ETE GS + +WG K+E+ WG++
Sbjct: 1590 WGTWDKKKPETETGGGGAAWGSQAKNNSETESGSSAAAWGTWDKKKSETELVDGAWGSQA 1649
Query: 403 TENE-----------AVWGSKKPETEKGSGSGSWGQKVVSGKE-----GG--WGADKLVN 528
+N W KKPETE G G +WG + + E GG WG K
Sbjct: 1650 KKNSETESGAGASTWGAWDKKKPETETGGGGAAWGSQAKNNSETESGSGGAAWGKKKSET 1709
Query: 529 DS 534
DS
Sbjct: 1710 DS 1711
Score = 68.6 bits (166), Expect = 4e-10
Identities = 60/201 (29%), Positives = 82/201 (40%), Gaps = 36/201 (17%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGT---KKDDTAAAASGWGTK-KPDTNTEKG-- 162
WG +A ET GS+ + WGT KK +T WG++ K ++ TE G
Sbjct: 1609 WGSQAKNNSETESGSS--------AAAWGTWDKKKSETELVDGAWGSQAKKNSETESGAG 1660
Query: 163 -SSWGQKVAKADE-------AGWGSKKSDDTENGSGSVAGSWGQK---VVSGIEAGWGAK 309
S+WG K E A WGS+ +++E SGS +WG+K SG A WG++
Sbjct: 1661 ASTWGAWDKKKPETETGGGGAAWGSQAKNNSETESGSGGAAWGKKKSETDSGGGAAWGSQ 1720
Query: 310 ----------------KMENETEKGSGSGSWGQKAISKNES---GWGTERTENEAVWGSK 432
K N +E GS S +WG+K S+ E WG+ WG
Sbjct: 1721 AKKNSESQLGAANWGSKNTNNSENGSDSAAWGKKKNSEAEPTSVAWGS--------WGQP 1772
Query: 433 KPETEKGSGSGSWGQKVVSGK 495
P G VS K
Sbjct: 1773 SPPASDKDAQEDDGNPWVSLK 1793
>ref|XP_013628527.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Brassica oleracea var. oleracea]
Length = 2041
Score = 90.9 bits (224), Expect = 7e-18
Identities = 73/228 (32%), Positives = 101/228 (44%), Gaps = 49/228 (21%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTK-KPDTNTEKGSS-WG 174
WG KA + WG N + + P+ WG K ++ +AA+ WG+ K +T TE ++ WG
Sbjct: 1415 WGPKAVS--DKPWGKKNSETEPAPAA-WGKKNSESESAAAAWGSSDKKNTGTESDAAGWG 1471
Query: 175 QKVAKADE-----AGWGSKKSDDTENGSGSVA-GSWGQKVVSGIEAG--WGAK-KMENET 327
K E A WGS + E A GSWG+K + G WG + K +ET
Sbjct: 1472 SAYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKSSETVSGGADWGIRGKRVSET 1531
Query: 328 EKG--------------SGSGSWGQKAISK--NESG---WGTERTENE--------AVWG 426
E G SG +WG + SK ESG WG++ N A WG
Sbjct: 1532 ESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSETEPGSGAAAWG 1591
Query: 427 S---KKPETEKGSGSGSWGQKVVSGKE-------GGWGA-DKLVNDSE 537
+ KKPETE G G +WG + + E WG DK +++E
Sbjct: 1592 TWDKKKPETETGGGGAAWGSQAKNNSETESGSSAAAWGTWDKKKSETE 1639
Score = 89.7 bits (221), Expect = 2e-17
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSNNPQKDVEPS-EPWGTK---KDDTAAAASGWGTK-KPDTN 150
WG + + ET GW S N + + WG++ K +T + + WG++ K ++
Sbjct: 1521 WGIRGKRVSETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSE 1580
Query: 151 TEKGS------SWGQKVAKADEAG----WGSKKSDDTENGSGSVAGSWG-----QKVVSG 285
TE GS +W +K + + G WGS+ +++E SGS A +WG +
Sbjct: 1581 TEPGSGAAAWGTWDKKKPETETGGGGAAWGSQAKNNSETESGSSAAAWGTWDKKKSETEL 1640
Query: 286 IEAGWGAKKMEN-ETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSK---KPETEKG 453
++ WG++ +N ETE G+G+ +WG K E TE A WGS+ ETE G
Sbjct: 1641 VDGAWGSQAKKNSETESGAGASTWGAWDKKKPE----TETGGGGAAWGSQAKNNSETESG 1696
Query: 454 SGSGSWGQKVVSGKEGGWGA----DKLVNDSE 537
SG +WG + E GA K N+SE
Sbjct: 1697 SGGAAWGSQAKKNSESQLGAANWGSKNTNNSE 1728
Score = 89.0 bits (219), Expect = 3e-17
Identities = 71/199 (35%), Positives = 97/199 (48%), Gaps = 29/199 (14%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGT---KKDDTAAAASG--WGTK-KPDTNTEKG 162
WG +A ET GS + WGT KK +T G WG++ K ++ TE G
Sbjct: 1571 WGSQAKNNSETEPGSG--------AAAWGTWDKKKPETETGGGGAAWGSQAKNNSETESG 1622
Query: 163 SS------WGQKVAKAD--EAGWGS--KKSDDTENGSG-SVAGSWGQKV----VSGIEAG 297
SS W +K ++ + + WGS KK+ +TE+G+G S G+W +K G A
Sbjct: 1623 SSAAAWGTWDKKKSETELVDGAWGSQAKKNSETESGAGASTWGAWDKKKPETETGGGGAA 1682
Query: 298 WGAKKMEN-ETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPE-TEKGSGSGSW 471
WG++ N ETE GSG +WG +A +ES G A WGSK +E GS S +W
Sbjct: 1683 WGSQAKNNSETESGSGGAAWGSQAKKNSESQLGA------ANWGSKNTNNSENGSDSAAW 1736
Query: 472 GQKVVSGKE------GGWG 510
G+K S E G WG
Sbjct: 1737 GKKKNSEAEPTSVAWGSWG 1755
Score = 87.0 bits (214), Expect = 2e-16
Identities = 72/240 (30%), Positives = 100/240 (41%), Gaps = 64/240 (26%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSN-NPQKDVEPSEP----WGTKKDDTAAAASGWGTK-KPDT 147
WG K ET WGS K+ EP+ WG K +T + + WG + K +
Sbjct: 1470 WGSAYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKSSETVSGGADWGIRGKRVS 1529
Query: 148 NTEKGS-----------------SWGQKVAKADE-----AGWGS--KKSDDTENGSGSVA 255
TE G+ +WG + E A WGS K + +TE GSG+ A
Sbjct: 1530 ETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSETEPGSGAAA 1589
Query: 256 -GSWGQKV----VSGIEAGWGAKKMEN-ETEKGSGSGSWGQKAISKNES-----GWGTER 402
G+W +K G A WG++ N ETE GS + +WG K+E+ WG++
Sbjct: 1590 WGTWDKKKPETETGGGGAAWGSQAKNNSETESGSSAAAWGTWDKKKSETELVDGAWGSQA 1649
Query: 403 TENE-----------AVWGSKKPETEKGSGSGSWGQKVVSGKE-----GG--WGADKLVN 528
+N W KKPETE G G +WG + + E GG WG+ N
Sbjct: 1650 KKNSETESGAGASTWGAWDKKKPETETGGGGAAWGSQAKNNSETESGSGGAAWGSQAKKN 1709
Score = 72.0 bits (175), Expect = 2e-11
Identities = 58/187 (31%), Positives = 79/187 (42%), Gaps = 22/187 (11%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGT---KKDDTAAAASGWGTK-KPDTNTEKG-- 162
WG +A ET GS+ + WGT KK +T WG++ K ++ TE G
Sbjct: 1609 WGSQAKNNSETESGSS--------AAAWGTWDKKKSETELVDGAWGSQAKKNSETESGAG 1660
Query: 163 -SSWGQKVAKADE-------AGWGSKKSDDTENGSGSVAGSWGQKVVSGIE-----AGWG 303
S+WG K E A WGS+ +++E SGS +WG + E A WG
Sbjct: 1661 ASTWGAWDKKKPETETGGGGAAWGSQAKNNSETESGSGGAAWGSQAKKNSESQLGAANWG 1720
Query: 304 AKKMENETEKGSGSGSWGQKAISKNES---GWGTERTENEAVWGSKKPETEKGSGSGSWG 474
+K N +E GS S +WG+K S+ E WG+ WG P G
Sbjct: 1721 SKN-TNNSENGSDSAAWGKKKNSEAEPTSVAWGS--------WGQPSPPASDKDAQEDDG 1771
Query: 475 QKVVSGK 495
VS K
Sbjct: 1772 NPWVSLK 1778
>ref|XP_018476064.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Raphanus sativus]
Length = 2041
Score = 90.5 bits (223), Expect = 9e-18
Identities = 70/213 (32%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTK-KPDTNTEKGSS--- 168
WG + ET GS W KK +T + + WG++ K ++ TE GSS
Sbjct: 1561 WGSQGRNNRETESGSGGAAWG-----SWDKKKPETESGGAAWGSQAKNNSETESGSSGAA 1615
Query: 169 ----WGQKVAKADEAG---WGSKKSDDTENGSGSVAGSWG------QKVVSGIEAGWGAK 309
W +K + + G WGS+ +++E SGS A WG + SG AGWG++
Sbjct: 1616 AWGTWDKKKPETESGGGAAWGSQAKNNSETESGSGAAVWGTWDKKKPETESG-GAGWGSQ 1674
Query: 310 KMENETEKGSGSGSWGQKAISKNESG----WGTERTENE------AVWGSKKP-ETEKGS 456
+ETE GSG+ +WG+K S+ ESG WG+ N A WGSK+ +E G+
Sbjct: 1675 --ASETEAGSGASAWGKKK-SETESGGGAAWGSRDKNNSESQVGAANWGSKETNNSENGT 1731
Query: 457 GSGSWGQK------VVSGKEGGWGADKLVNDSE 537
S +WG+K SG G WG D++
Sbjct: 1732 DSAAWGKKKNVEAEPASGAWGSWGQPTPTADAQ 1764
Score = 82.8 bits (203), Expect = 4e-15
Identities = 67/215 (31%), Positives = 98/215 (45%), Gaps = 40/215 (18%)
Frame = +1
Query: 1 WG-----HKAAKADETGWGS---NNPQKDVEPSEPWGT---KKDDTAAAASGWGTKKPDT 147
WG + +D WGS NNP + + S WG+ +T A++ WG K +T
Sbjct: 1446 WGSSDKNNPGTNSDAAAWGSTNKNNPGTESDASA-WGSGTKMNKETEPASAAWGKKSSET 1504
Query: 148 NTEKGSSWGQKVAKADEA-----GWGSK-KSDDTENGSGSVAGSWGQKVVSGIE-----A 294
G+ WG + + E GW S+ KS +T++G + WG + S E +
Sbjct: 1505 -VSGGADWGNRSKRVSETESGAGGWASRNKSLETQSGGAT----WGSRDKSKFETESGGS 1559
Query: 295 GWGAKKMEN-ETEKGSGSGSWGQ--KAISKNESG---WGTERTENE---------AVWGS 429
WG++ N ETE GSG +WG K + ESG WG++ N A WG+
Sbjct: 1560 AWGSQGRNNRETESGSGGAAWGSWDKKKPETESGGAAWGSQAKNNSETESGSSGAAAWGT 1619
Query: 430 ---KKPETEKGSGSGSWGQKVVSGKEGGWGADKLV 525
KKPETE G G+ +WG + + E G+ V
Sbjct: 1620 WDKKKPETESGGGA-AWGSQAKNNSETESGSGAAV 1653
Score = 80.5 bits (197), Expect = 3e-14
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSE--PWGTKKDDTAAAASGWGT---KKPDTNTEKGS 165
WG KA + WG N + + P+ WG K +T + A+ WG+ P TN++ +
Sbjct: 1405 WGPKAVS--DKPWGKKNSETEPAPAAWGSWGKKNPETESGAAAWGSSDKNNPGTNSD-AA 1461
Query: 166 SWG-----QKVAKADEAGWGS--KKSDDTENGSGSVAGSWGQKVVSGIEAG--WGAK-KM 315
+WG ++D + WGS K + +TE S +WG+K + G WG + K
Sbjct: 1462 AWGSTNKNNPGTESDASAWGSGTKMNKETEPAS----AAWGKKSSETVSGGADWGNRSKR 1517
Query: 316 ENETEKGSGSGSWGQKAISKNESG--WGT------ERTENEAVWGSK---KPETEKGSGS 462
+ETE G+G + K++ G WG+ E + WGS+ ETE GSG
Sbjct: 1518 VSETESGAGGWASRNKSLETQSGGATWGSRDKSKFETESGGSAWGSQGRNNRETESGSGG 1577
Query: 463 ---GSWGQKVVSGKEGG--WGADKLVNDSE 537
GSW +K + GG WG+ + N+SE
Sbjct: 1578 AAWGSWDKKKPETESGGAAWGS-QAKNNSE 1606
Score = 75.5 bits (184), Expect = 2e-12
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGT---KKDDTAAAASGWGTKKPDTNTEKG-SS 168
WG +A ET GS + WGT KK +T + +GWG++ +T G S+
Sbjct: 1635 WGSQAKNNSETESGSG--------AAVWGTWDKKKPETESGGAGWGSQASETEAGSGASA 1686
Query: 169 WGQKVAKADEAG---WGSKKSDDTENGSGSVAGSWGQKVVSGIE-----AGWGAKKMENE 324
WG+K ++ + G WGS+ +++E+ G A +WG K + E A WG KK E
Sbjct: 1687 WGKKKSETESGGGAAWGSRDKNNSESQVG--AANWGSKETNNSENGTDSAAWG-KKKNVE 1743
Query: 325 TEKGSGS-GSWGQKAISKNESGWGTERTENEAVWGSKKPET---EKGSGSGSWGQKV--- 483
E SG+ GSWGQ + + + ++ W S K + + G+ + WG
Sbjct: 1744 AEPASGAWGSWGQPTPTAD------AQEDDGNPWVSLKATSSADKDGNETSQWGVPTKRY 1797
Query: 484 --VSGKEGGWGAD 516
+G +GG GAD
Sbjct: 1798 PSTTGSQGGGGAD 1810
>ref|XP_013628528.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X3
[Brassica oleracea var. oleracea]
Length = 1929
Score = 90.1 bits (222), Expect = 1e-17
Identities = 76/227 (33%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDV-----EPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGS 165
WG K A+ D + P DV +PWG K +T A + WG KK + +
Sbjct: 1393 WGTKPAQNDSVVIENGEPSSDVWGPKAVSDKPWGKKNSETEPAPAAWG-KKNSESESAAA 1451
Query: 166 SWGQKVAK-----ADEAGWGS--KKSDDTEN-----GSG-----------SVAGSWGQKV 276
+WG K +D AGWGS KK+ +TE GSG + GSWG+K
Sbjct: 1452 AWGSSDKKNTGTESDAAGWGSAYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKS 1511
Query: 277 VSGIEAG--WGAK-KMENETEKGSGSGSWGQKAIS-KNESG---WGT------ERTENEA 417
+ G WG + K +ETE SG+G W + S +N+SG WG+ E A
Sbjct: 1512 SETVSGGADWGIRGKRVSETE--SGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGA 1569
Query: 418 VWGSK---KPETEKGSGSGSWGQKVVSGKEGGWGA----DKLVNDSE 537
WGS+ ETE GSG+ +WG + E GA K N+SE
Sbjct: 1570 AWGSQAKNNSETEPGSGAAAWGSQAKKNSESQLGAANWGSKNTNNSE 1616
Score = 83.2 bits (204), Expect = 3e-15
Identities = 69/202 (34%), Positives = 93/202 (46%), Gaps = 32/202 (15%)
Frame = +1
Query: 1 WGHKAAK-----ADETGWGS---NNPQKDVEPSEPWGT-----KKDDTAAAASG-WGTKK 138
WG K +D GWGS NP+ ++ + WG+ K+ + A AA G WG K
Sbjct: 1453 WGSSDKKNTGTESDAAGWGSAYKKNPETELNAAA-WGSGAKMNKETEPAPAAWGSWGKKS 1511
Query: 139 PDTNTEKGSSWGQKVAKADEA-----GWGSKKSDDTENGSGSVAGSWGQKVVSGIE---- 291
+T G+ WG + + E GW S+ EN SG +WG + S E
Sbjct: 1512 SET-VSGGADWGIRGKRVSETESGAGGWASRNRS-LENQSGGA--TWGSRDKSKFETESG 1567
Query: 292 -AGWGAKKMEN-ETEKGSGSGSWGQKAISKNESGWGTERTENEAVWGSKKPE-TEKGSGS 462
A WG++ N ETE GSG+ +WG +A +ES G A WGSK +E GS S
Sbjct: 1568 GAAWGSQAKNNSETEPGSGAAAWGSQAKKNSESQLGA------ANWGSKNTNNSENGSDS 1621
Query: 463 GSWGQKVVSGKE------GGWG 510
+WG+K S E G WG
Sbjct: 1622 AAWGKKKNSEAEPTSVAWGSWG 1643
Score = 67.8 bits (164), Expect = 7e-10
Identities = 58/206 (28%), Positives = 80/206 (38%), Gaps = 41/206 (19%)
Frame = +1
Query: 1 WGHKAAKADET-----GWGSN-NPQKDVEPSEP----WGTKKDDTAAAASGWGTK-KPDT 147
WG K ET WGS K+ EP+ WG K +T + + WG + K +
Sbjct: 1470 WGSAYKKNPETELNAAAWGSGAKMNKETEPAPAAWGSWGKKSSETVSGGADWGIRGKRVS 1529
Query: 148 NTEKGS-----------------SWGQKVAKADE-----AGWGSKKSDDTENGSGSVAGS 261
TE G+ +WG + E A WGS+ +++E GS A +
Sbjct: 1530 ETESGAGGWASRNRSLENQSGGATWGSRDKSKFETESGGAAWGSQAKNNSETEPGSGAAA 1589
Query: 262 WGQKVVSGIE-----AGWGAKKMENETEKGSGSGSWGQKAISKNES---GWGTERTENEA 417
WG + E A WG+K N +E GS S +WG+K S+ E WG+
Sbjct: 1590 WGSQAKKNSESQLGAANWGSKN-TNNSENGSDSAAWGKKKNSEAEPTSVAWGS------- 1641
Query: 418 VWGSKKPETEKGSGSGSWGQKVVSGK 495
WG P G VS K
Sbjct: 1642 -WGQPSPPASDKDAQEDDGNPWVSLK 1666
>gb|OHS93604.1| hypothetical protein TRFO_40109 [Tritrichomonas foetus]
Length = 645
Score = 88.2 bits (217), Expect = 5e-17
Identities = 54/198 (27%), Positives = 77/198 (38%), Gaps = 36/198 (18%)
Frame = +1
Query: 31 TGWGSNNPQKDVEPSEPWGTKKDDT-----------------AAAASGWGTKKPD----- 144
TGWG P + PS WGT T + +++GWGT
Sbjct: 387 TGWGITAPPANNPPSSSWGTPAASTTTTTTPSAWGQPANSSSSGSSTGWGTNPSSGESSW 446
Query: 145 -----TNTEKGSSWGQKVAKADEAGWGSKKSDDTENGS--------GSVAGSWGQKVVSG 285
+N GSSWG + + WGS S +GS G+ SWG +
Sbjct: 447 GSSDTSNNSGGSSWGTSNSSTTTSAWGSNTSSTNSSGSSWGSNSNSGNTGSSWGSSSSNA 506
Query: 286 IEAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTERTENE-AVWGSKKPETEKGSGS 462
+ WG N + S G+WG + S + S WG + N + WG+ T GSG
Sbjct: 507 PGSTWGTSN--NNSSNNSSGGAWGTNSNSSSGSTWGNSNSNNSGSTWGTSNSNTG-GSGG 563
Query: 463 GSWGQKVVSGKEGGWGAD 516
G+WG + WG++
Sbjct: 564 GTWGTSNNNNSGSTWGSN 581
Score = 85.5 bits (210), Expect = 5e-16
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Frame = +1
Query: 1 WGHKAAKADETG--WGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWG 174
WG + G WG++N + WG+ T ++ S WG+ NT GSSWG
Sbjct: 446 WGSSDTSNNSGGSSWGTSNSSTT---TSAWGSNTSSTNSSGSSWGSNSNSGNT--GSSWG 500
Query: 175 QKVAKADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKK---------MENET 327
+ A + WG+ ++ + N SG G+WG S + WG N
Sbjct: 501 SSSSNAPGSTWGTSNNNSSNNSSG---GAWGTNSNSSSGSTWGNSNSNNSGSTWGTSNSN 557
Query: 328 EKGSGSGSWGQKAISKNESGWGTERT--ENEAVWGSKKPETEKGSGSGSWGQKVVSGKEG 501
GSG G+WG + + S WG+ + N +WG+ + G+WG G
Sbjct: 558 TGGSGGGTWGTSNNNNSGSTWGSNNSGGGNSGMWGTGNNNNSNNNSGGTWGSGTKFG--S 615
Query: 502 GWGADKLVND 531
WG++ N+
Sbjct: 616 SWGSNNNNNN 625
Score = 74.7 bits (182), Expect = 2e-12
Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 8/174 (4%)
Frame = +1
Query: 13 AAKADETGWG--------SNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSS 168
AA +GWG +N+ + + T D ++ +GWG P N SS
Sbjct: 344 AAAPSTSGWGIPTTTAPAANDTNNNANANTNNNTSNDQPSSTTTGWGITAPPANNPPSSS 403
Query: 169 WGQKVAKADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEAGWGAKKMENETEKGSGSG 348
WG A S + S + WG SG E+ WG+ ++T SG
Sbjct: 404 WGTPAASTTTTTTPSAWGQPANSSSSGSSTGWGTNPSSG-ESSWGS----SDTSNNSGGS 458
Query: 349 SWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKEGGWG 510
SWG S S WG+ + + S + G+ SWG + WG
Sbjct: 459 SWGTSNSSTTTSAWGSNTSSTNSSGSSWGSNSNSGNTGSSWGSSSSNAPGSTWG 512
Score = 62.0 bits (149), Expect = 6e-08
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Frame = +1
Query: 1 WGHKAAKADETGWG-SNNPQKDVEPSEPWGTKKDDTAAAASG----------WGTKKPDT 147
WG ++ A + WG SNN + WGT + ++ + G WGT +T
Sbjct: 499 WGSSSSNAPGSTWGTSNNNSSNNSSGGAWGTNSNSSSGSTWGNSNSNNSGSTWGTSNSNT 558
Query: 148 ------------NTEKGSSWGQKVAKADEAG-WGSKKSDDTENGSGSVAGSWGQKVVSGI 288
N GS+WG + +G WG+ ++++ N SG G+WG G
Sbjct: 559 GGSGGGTWGTSNNNNSGSTWGSNNSGGGNSGMWGTGNNNNSNNNSG---GTWGSGTKFG- 614
Query: 289 EAGWGAKKMENETEKGSGSGSWGQKAISKNESGWGTER 402
+ WG+ N G+ +WG N S WGT R
Sbjct: 615 -SSWGS---NNNNNNPGGNSTWGG---GGNTSTWGTTR 645
>ref|XP_001436180.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
emb|CAK68783.1| unnamed protein product [Paramecium tetraurelia]
Length = 1015
Score = 87.0 bits (214), Expect = 1e-16
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 14/184 (7%)
Frame = +1
Query: 1 WGHKAAKADETG-WGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQ 177
WG+ K + G WGS + + S WG+ + A + GWG + WG
Sbjct: 228 WGNSDNKDNAGGGWGSTSTNEQPAQSGGWGSTTTEQPAQSGGWGNSTEQPVQQASEGWGS 287
Query: 178 KV------AKADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEA--GWGAKKMENETEK 333
K A++++ GWG+ TE + G WG + GWG E + ++
Sbjct: 288 KTEQPPQQAESNQGGWGTT----TEQSNQQSGGGWGSTTEQPQKQSNGWGNSTQEQQPQQ 343
Query: 334 GSGSGSWGQKAI---SKNESGWGTERTENEAVWGSKKPETEKGSGSGSWGQKV--VSGKE 498
SG+G WG +++ GWG TE A G TE+ + SG WG +
Sbjct: 344 -SGAGGWGSSNTEQPAQSSGGWGASTTEQPATTGGWGSTTEQATTSGGWGSTTDQAASSG 402
Query: 499 GGWG 510
GGWG
Sbjct: 403 GGWG 406
Score = 67.4 bits (163), Expect = 9e-10
Identities = 50/186 (26%), Positives = 73/186 (39%), Gaps = 16/186 (8%)
Frame = +1
Query: 4 GHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQKV 183
G + + + WG N+ + WG A S WG D G WG
Sbjct: 194 GFRGGRDNGGSWGGNSSNNN-GGGNSWGGN-----AEGSSWGNS--DNKDNAGGGWGSTS 245
Query: 184 AK---ADEAGWGSKKSDDTENGSGSVAGSWG---QKVVSGIEAGWGAKKMENETEKGSGS 345
A GWGS ++ +G WG ++ V GWG+K + + S
Sbjct: 246 TNEQPAQSGGWGSTTTEQPAQ-----SGGWGNSTEQPVQQASEGWGSKTEQPPQQAESNQ 300
Query: 346 GSWGQKAISKNES---GWG--TERTENEAV-WGSKKPETE-KGSGSGSWGQKVV---SGK 495
G WG N+ GWG TE+ + ++ WG+ E + + SG+G WG +
Sbjct: 301 GGWGTTTEQSNQQSGGGWGSTTEQPQKQSNGWGNSTQEQQPQQSGAGGWGSSNTEQPAQS 360
Query: 496 EGGWGA 513
GGWGA
Sbjct: 361 SGGWGA 366
Score = 67.0 bits (162), Expect = 1e-09
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 9/180 (5%)
Frame = +1
Query: 1 WGHKAAKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKGSSWGQK 180
WG + GWGS+ + + WG+ + + GWG+ + + G WG
Sbjct: 510 WGGSSNDQGGGGWGSSTTDQPAS-NGGWGSTATEQPQSNGGWGSTATEQPAQTGG-WGST 567
Query: 181 VAK--ADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEA--GWGAKKMENETEKGSGSG 348
+ A GWGS ++ + +G WG +A GWG+ TE+ + +G
Sbjct: 568 ATEKPAQNGGWGSTATEQPQQ-----SGGWGSTTTEQPQASGGWGS----TATEQPAQNG 618
Query: 349 SWGQKAISK--NESGWGTERTENEAV---WGSKKPETEKGSGSGSWGQKVVSGKEGGWGA 513
WG + GWG+ TE A WGS + G GS + GWG+
Sbjct: 619 GWGSTTTEQPAQNGGWGSTATEQPAQTGGWGSSDAPQQSNGGWGSSNND--QQQSNGWGS 676
Score = 65.9 bits (159), Expect = 3e-09
Identities = 43/149 (28%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Frame = +1
Query: 94 KDDTAAAASGWGTKKPDTNTEKGSSWGQKVAKADEAGWGSKKSDDTENGSGSVAGSWGQK 273
+ D G+ + + N+ G SWG GWGS +D + G WG
Sbjct: 485 RGDRGDRRGGFRGGRDNDNSGNGGSWGGSSNDQGGGGWGSSTTDQPASN-----GGWGST 539
Query: 274 VVSGIEA--GWGAKKMENETEKGSGSGSWGQKAISK--NESGWG---TERTENEAVWGSK 432
++ GWG+ TE+ + +G WG A K GWG TE+ + WGS
Sbjct: 540 ATEQPQSNGGWGS----TATEQPAQTGGWGSTATEKPAQNGGWGSTATEQPQQSGGWGS- 594
Query: 433 KPETEKGSGSGSWGQKVVS--GKEGGWGA 513
TE+ SG WG + GGWG+
Sbjct: 595 -TTTEQPQASGGWGSTATEQPAQNGGWGS 622
Score = 62.0 bits (149), Expect = 7e-08
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 11/181 (6%)
Frame = +1
Query: 1 WGHKA------AKADETGWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNTEKG 162
WG K A++++ GWG+ Q + + WG+ + ++GWG
Sbjct: 285 WGSKTEQPPQQAESNQGGWGTTTEQSNQQSGGGWGSTTEQPQKQSNGWG----------N 334
Query: 163 SSWGQKVAKADEAGWGSKKSDDTENGSGSVAGSWGQKVVS--GIEAGWGAKKMENETEKG 336
S+ Q+ ++ GWGS ++ S G WG GWG + TE+
Sbjct: 335 STQEQQPQQSGAGGWGSSNTEQPAQSS----GGWGASTTEQPATTGGWG-----STTEQA 385
Query: 337 SGSGSWGQKA--ISKNESGW-GTERTENEAVWGSKKPETEKGSGSGSWGQKVVSGKEGGW 507
+ SG WG + + GW G+ +N WG GSG G G+ G G
Sbjct: 386 TTSGGWGSTTDQAASSGGGWGGSSDQQNGNSWGG------GGSGDGQRGRGRGRGDRGDR 439
Query: 508 G 510
G
Sbjct: 440 G 440
Score = 58.2 bits (139), Expect = 1e-06
Identities = 44/179 (24%), Positives = 61/179 (34%), Gaps = 19/179 (10%)
Frame = +1
Query: 34 GWGSNNPQKDVEPSEPWGTKKDDTAAAASGWGTKKPDTNT------------EKGSSWGQ 177
GWGS+N ++ + S WG + A GWG+ T G WG
Sbjct: 348 GWGSSNTEQPAQSSGGWGASTTEQPATTGGWGSTTEQATTSGGWGSTTDQAASSGGGWGG 407
Query: 178 KVAKADEAGWGSKKSDDTENGSGSVAGSWGQKVVSGIEA------GWGAKKMENETEKGS 339
+ + WG S D + G G G G + G G G + E +G
Sbjct: 408 SSDQQNGNSWGGGGSGDGQRGRGRGRGDRGDR--GGFRGRGDGFRGRGDRGGEGFRGRGD 465
Query: 340 GSGSWGQKAISKNESGWGTERTENEAVWGSKKPETEKGSGS-GSWGQKVVSGKEGGWGA 513
G G + G G + G + SG+ GSWG GGWG+
Sbjct: 466 GFRGRGDRGDRGGFRGRGDRGDRGDRRGGFRGGRDNDNSGNGGSWGGSSNDQGGGGWGS 524