BLASTX nr result

ID: Chrysanthemum21_contig00036381 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036381
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89479.1| hypothetical protein Ccrd_008534 [Cynara carduncu...   132   3e-33
ref|XP_022037652.1| scar-like domain-containing protein WAVE 5 i...    79   2e-14
ref|XP_022037651.1| protein SCAR1-like isoform X1 [Helianthus an...    79   2e-14
ref|XP_023743880.1| protein SCAR3 [Lactuca sativa] >gi|132235765...    69   1e-10

>gb|KVH89479.1| hypothetical protein Ccrd_008534 [Cynara cardunculus var. scolymus]
          Length = 1019

 Score =  132 bits (333), Expect = 3e-33
 Identities = 74/134 (55%), Positives = 94/134 (70%)
 Frame = +3

Query: 6   MHEAGHLDDNSTSFEFRLPESTSASKDESIPPESHMEAYTSSKNENYEDMLDSSHLVSSD 185
           MH+AGHLDD+ST+FEF++PE+ S    +++ PE H++A +SSKNENYED+  SS      
Sbjct: 417 MHKAGHLDDSSTNFEFQVPENQSCLSPKAVSPEYHVDACSSSKNENYEDLTKSS------ 470

Query: 186 QATSSQVADISTISVTTPDKVESQEAERHVTNEVTVPSDELYSSTREPTSQPLPNEQILS 365
              SS V  IS+I  TTP+KVE +E +R+  N  TV SD LYSS+ EP SQ     QI+S
Sbjct: 471 ---SSPVDAISSICFTTPEKVELEEVKRNDANLETVASDGLYSSSIEPNSQ-----QIVS 522

Query: 366 TYESPKPSSSTSGA 407
           TYESPKPSSSTS A
Sbjct: 523 TYESPKPSSSTSNA 536


>ref|XP_022037652.1| scar-like domain-containing protein WAVE 5 isoform X2 [Helianthus
           annuus]
          Length = 968

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 53/136 (38%), Positives = 72/136 (52%)
 Frame = +3

Query: 6   MHEAGHLDDNSTSFEFRLPESTSASKDESIPPESHMEAYTSSKNENYEDMLDSSHLVSSD 185
           M++   LDD S + EF +PES             HMEA  SS  EN+ED++      +SD
Sbjct: 427 MNKESRLDDKSMNIEFHVPES-------------HMEASGSSNIENHEDVM------TSD 467

Query: 186 QATSSQVADISTISVTTPDKVESQEAERHVTNEVTVPSDELYSSTREPTSQPLPNEQILS 365
              S+Q+A +S+  +TT +K+ES+E ER+VTN  TV                    + +S
Sbjct: 468 LIRSTQMAVVSSNILTTDEKLESEEVERNVTNTETVA------------------REAIS 509

Query: 366 TYESPKPSSSTSGAHT 413
           TYESPKPS STSG  T
Sbjct: 510 TYESPKPSWSTSGGQT 525


>ref|XP_022037651.1| protein SCAR1-like isoform X1 [Helianthus annuus]
 gb|OTG24720.1| putative SCAR/WAVE family [Helianthus annuus]
          Length = 969

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 53/136 (38%), Positives = 72/136 (52%)
 Frame = +3

Query: 6   MHEAGHLDDNSTSFEFRLPESTSASKDESIPPESHMEAYTSSKNENYEDMLDSSHLVSSD 185
           M++   LDD S + EF +PES             HMEA  SS  EN+ED++      +SD
Sbjct: 427 MNKESRLDDKSMNIEFHVPES-------------HMEASGSSNIENHEDVM------TSD 467

Query: 186 QATSSQVADISTISVTTPDKVESQEAERHVTNEVTVPSDELYSSTREPTSQPLPNEQILS 365
              S+Q+A +S+  +TT +K+ES+E ER+VTN  TV                    + +S
Sbjct: 468 LIRSTQMAVVSSNILTTDEKLESEEVERNVTNTETVA------------------REAIS 509

Query: 366 TYESPKPSSSTSGAHT 413
           TYESPKPS STSG  T
Sbjct: 510 TYESPKPSWSTSGGQT 525


>ref|XP_023743880.1| protein SCAR3 [Lactuca sativa]
 gb|PLY66111.1| hypothetical protein LSAT_7X24040 [Lactuca sativa]
          Length = 944

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 46/121 (38%), Positives = 60/121 (49%)
 Frame = +3

Query: 27  DDNSTSFEFRLPESTSASKDESIPPESHMEAYTSSKNENYEDMLDSSHLVSSDQATSSQV 206
           DD ST+FEF +PE TS+SK     PESH+E +  S NENYE                   
Sbjct: 416 DDMSTNFEFHVPEHTSSSKS----PESHIEDHIYSNNENYEQ------------------ 453

Query: 207 ADISTISVTTPDKVESQEAERHVTNEVTVPSDELYSSTREPTSQPLPNEQILSTYESPKP 386
               +ISVTTP+K ES+E E    +  TV S E+     E    PL   + +S  +SP+ 
Sbjct: 454 ---HSISVTTPEKFESEEVETPAAHPATVESKEV-----ETVQFPLTTNESISPEQSPET 505

Query: 387 S 389
           S
Sbjct: 506 S 506


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