BLASTX nr result

ID: Chrysanthemum21_contig00036372 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036372
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10715.1| hypothetical protein Ccrd_010879 [Cynara carduncu...    57   3e-07
ref|XP_023769670.1| NADH dehydrogenase [ubiquinone] iron-sulfur ...    54   6e-06

>gb|KVI10715.1| hypothetical protein Ccrd_010879 [Cynara cardunculus var. scolymus]
          Length = 240

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +1

Query: 151 VAGPVLQGPNFRGTVSGERSFATKHSFSTDK 243
           VAG  LQGPNF GT+SG RSFATKHSFSTDK
Sbjct: 46  VAGQALQGPNFHGTISGARSFATKHSFSTDK 76


>ref|XP_023769670.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8,
           mitochondrial-like [Lactuca sativa]
 gb|PLY80970.1| hypothetical protein LSAT_9X108541 [Lactuca sativa]
          Length = 228

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +1

Query: 145 MAVAGPVLQGPNFRGTVSGERSFATKHSFSTDK 243
           + VAG VLQGPN   TVSG RSFATKHSFSTDK
Sbjct: 18  LTVAGQVLQGPNICETVSGARSFATKHSFSTDK 50


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