BLASTX nr result

ID: Chrysanthemum21_contig00036092 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036092
         (533 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023750033.1| DExH-box ATP-dependent RNA helicase DExH3 [L...    59   5e-07
gb|KVH88219.1| hypothetical protein Ccrd_024391 [Cynara carduncu...    58   8e-07

>ref|XP_023750033.1| DExH-box ATP-dependent RNA helicase DExH3 [Lactuca sativa]
 gb|PLY95889.1| hypothetical protein LSAT_5X36980 [Lactuca sativa]
          Length = 1158

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 7   SGNADSLVDGSLMEKVFERRSLQMRNMQRAWE 102
           +GN DSLVDGSLMEKV +RRSLQMRNMQR+WE
Sbjct: 216 NGNPDSLVDGSLMEKVLQRRSLQMRNMQRSWE 247


>gb|KVH88219.1| hypothetical protein Ccrd_024391 [Cynara cardunculus var. scolymus]
          Length = 293

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +1

Query: 10  GNADSLVDGSLMEKVFERRSLQMRNMQRAWE 102
           G+ DSLVDGSLMEKV +RRSLQMRNMQRAWE
Sbjct: 199 GHPDSLVDGSLMEKVLQRRSLQMRNMQRAWE 229


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