BLASTX nr result

ID: Chrysanthemum21_contig00036046 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036046
         (664 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH94421.1| BRCT domain-containing protein [Cynara cardunculu...    75   8e-12
ref|XP_021987543.1| uncharacterized protein LOC110884168 [Helian...    66   6e-09

>gb|KVH94421.1| BRCT domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 1002

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = -3

Query: 218 LRR*VNAVGSQTTEVRSSAGSNLTDKLTDNGPTYVHAETKLLEVPI*RSREMSLTSNNEN 39
           L R  +A G+Q++EVRSSAGSNLT+K++DNGP+ VHAE +  EV + RS+E +L S+N N
Sbjct: 93  LWRRASAGGTQSSEVRSSAGSNLTEKVSDNGPSSVHAEARCREVLVGRSKERNLISDNNN 152

Query: 38  TLKVDQD 18
              VDQD
Sbjct: 153 VAMVDQD 159


>ref|XP_021987543.1| uncharacterized protein LOC110884168 [Helianthus annuus]
 gb|OTG10042.1| putative BRCT domain-containing protein [Helianthus annuus]
          Length = 730

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = -3

Query: 224 GTLRR*VNAVGSQTTEVRSSAGSNLTDKLTDNGPTYVHAETKLLEVPI*RSREMSLTSNN 45
           G+L R V+AVG Q+ EV+SSAGSNLTDK+T NGP  +   T+  E     S E ++ SNN
Sbjct: 88  GSLWRRVSAVGVQSFEVKSSAGSNLTDKVTGNGPNSLQ-HTRYQETLTGMSSEKNIISNN 146

Query: 44  ENTLKVDQDTK 12
           EN   VDQD K
Sbjct: 147 ENVANVDQDQK 157


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