BLASTX nr result

ID: Chrysanthemum21_contig00036005 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036005
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY92842.1| hypothetical protein LSAT_5X181601 [Lactuca sativa]     83   2e-17

>gb|PLY92842.1| hypothetical protein LSAT_5X181601 [Lactuca sativa]
          Length = 116

 Score = 82.8 bits (203), Expect = 2e-17
 Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
 Frame = +3

Query: 9   KNLAVFVTIILIFMSFKPNEACRLLDGGFEEPWMKTGNLLLSSLQRXXXXXXXXXXXXXX 188
           +  AV  +++L  M+F+PNEACRLLDGGFEE WMK GNL LSSLQ+              
Sbjct: 6   QKFAVIASLVLFCMAFEPNEACRLLDGGFEETWMKAGNLFLSSLQKGSVPTPGNGCSSTG 65

Query: 189 XXXXXXXXSKKVVGRYVGGTSDVASP----PAVTRSYPQQNGQFGAS 317
                   SKKV G + G  +   +P    P++T +YPQ   +FG +
Sbjct: 66  NGGGSCIGSKKVAGGHGGDGAPPPTPSPLIPSLTHAYPQHMVEFGVT 112


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