BLASTX nr result

ID: Chrysanthemum21_contig00036001 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00036001
         (729 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cy...    69   5e-10

>gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
           var. scolymus]
          Length = 349

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 55/124 (44%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
 Frame = +3

Query: 387 KELLPCL-SLYSLMSSFYINYTRXXXXXXXXXXXXXXXX----YHVMPSITNPEGVMLYH 551
           + L  CL S YS M SFYI++ R                    YH MPSIT P+GVM   
Sbjct: 2   ENLSACLPSFYSQMESFYISFIRSYHSLASLPAISQGLSWWDLYHAMPSITYPKGVM--- 58

Query: 552 AMSSISEHVLSEL*SILSN------TISDLTHGFNLI*FHHRDLLDLARPLHLHPYVHQM 713
             +SI    L  L +   N       ISDL  G N+I FHH DLLDLAR   LHPYVHQ+
Sbjct: 59  --NSILP-CLPFLNTCCQNGEPCLAVISDLRLGLNVILFHHHDLLDLAR--LLHPYVHQL 113

Query: 714 FSYL 725
           FS L
Sbjct: 114 FSCL 117


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