BLASTX nr result

ID: Chrysanthemum21_contig00035852 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035852
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97456.1| hypothetical protein Ccrd_000387, partial [Cynara...    70   2e-11
ref|XP_022015353.1| protein CROWDED NUCLEI 2-like [Helianthus an...    62   1e-08
gb|PLY62833.1| hypothetical protein LSAT_4X19300 [Lactuca sativa]      60   5e-08
ref|XP_023748267.1| protein CROWDED NUCLEI 2-like [Lactuca sativa]     60   5e-08
gb|KVH96317.1| hypothetical protein Ccrd_001598 [Cynara carduncu...    54   1e-05

>gb|KVH97456.1| hypothetical protein Ccrd_000387, partial [Cynara cardunculus var.
           scolymus]
          Length = 1176

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 36/43 (83%), Positives = 36/43 (83%), Gaps = 4/43 (9%)
 Frame = -3

Query: 204 MFTTQQRVTRSPLSITPRNDG----NTTRHVSGKGKAVAFYDG 88
           MFTTQQRVTRSPL ITPR DG    NTTRHVSGKGKAVAF DG
Sbjct: 1   MFTTQQRVTRSPLPITPRTDGRKTDNTTRHVSGKGKAVAFIDG 43


>ref|XP_022015353.1| protein CROWDED NUCLEI 2-like [Helianthus annuus]
 gb|OTF93065.1| putative nuclear matrix constituent protein [Helianthus annuus]
          Length = 1132

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 6/44 (13%)
 Frame = -3

Query: 204 MFTTQQRVTRSPLSITPRNDG------NTTRHVSGKGKAVAFYD 91
           M+TTQQRVTRSPLSITPR+D       + TRHVSGKGKAVAF D
Sbjct: 1   MYTTQQRVTRSPLSITPRSDAQPFGNPSITRHVSGKGKAVAFVD 44


>gb|PLY62833.1| hypothetical protein LSAT_4X19300 [Lactuca sativa]
          Length = 1073

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 32/42 (76%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
 Frame = -3

Query: 204 MFTTQQRVTRSPLSITPRND----GNTTRHVSGKGKAVAFYD 91
           MFTTQQRVTRS LSITPR      GN+ RHVSGKGKAVAF D
Sbjct: 1   MFTTQQRVTRSSLSITPRTGGQKIGNSPRHVSGKGKAVAFMD 42


>ref|XP_023748267.1| protein CROWDED NUCLEI 2-like [Lactuca sativa]
          Length = 1139

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 32/42 (76%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
 Frame = -3

Query: 204 MFTTQQRVTRSPLSITPRND----GNTTRHVSGKGKAVAFYD 91
           MFTTQQRVTRS LSITPR      GN+ RHVSGKGKAVAF D
Sbjct: 1   MFTTQQRVTRSSLSITPRTGGQKIGNSPRHVSGKGKAVAFMD 42


>gb|KVH96317.1| hypothetical protein Ccrd_001598 [Cynara cardunculus var. scolymus]
          Length = 1155

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
 Frame = -3

Query: 210 NTMFTTQQRVTRSPLSITPRND----GNTTRHVSGKGKAVAFYDG 88
           N    T  R+ RS L+ITPR+D    GNTT HVSGKGKAVAF DG
Sbjct: 3   NPPTVTDHRIRRSTLTITPRSDLQKIGNTTSHVSGKGKAVAFIDG 47


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