BLASTX nr result

ID: Chrysanthemum21_contig00035770 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035770
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023761313.1| TORTIFOLIA1-like protein 4 [Lactuca sativa] ...    65   4e-09
ref|XP_022010304.1| TORTIFOLIA1-like protein 4 [Helianthus annuus]     60   2e-07
gb|OTF93671.1| putative ARM repeat superfamily protein [Helianth...    60   2e-07
ref|XP_022020475.1| TORTIFOLIA1-like protein 4 isoform X1 [Helia...    56   4e-06

>ref|XP_023761313.1| TORTIFOLIA1-like protein 4 [Lactuca sativa]
 gb|PLY87394.1| hypothetical protein LSAT_4X7920 [Lactuca sativa]
          Length = 625

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = +3

Query: 51  SPGRSSELLLSARKKKVTQGQNRYFDRFDGGSLANCVQQR 170
           SPGRS E L++ARKKK  Q QNR FDRFDGGSL NC+QQR
Sbjct: 585 SPGRSFESLMNARKKKAAQVQNRNFDRFDGGSLGNCIQQR 624


>ref|XP_022010304.1| TORTIFOLIA1-like protein 4 [Helianthus annuus]
          Length = 588

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/42 (69%), Positives = 31/42 (73%)
 Frame = +3

Query: 45  FGSPGRSSELLLSARKKKVTQGQNRYFDRFDGGSLANCVQQR 170
           F + GR  E L SARKKK  QGQ R FDRFDGG LANC+QQR
Sbjct: 546 FENQGRGVETLSSARKKKAVQGQIRNFDRFDGGFLANCIQQR 587


>gb|OTF93671.1| putative ARM repeat superfamily protein [Helianthus annuus]
          Length = 590

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/42 (69%), Positives = 31/42 (73%)
 Frame = +3

Query: 45  FGSPGRSSELLLSARKKKVTQGQNRYFDRFDGGSLANCVQQR 170
           F + GR  E L SARKKK  QGQ R FDRFDGG LANC+QQR
Sbjct: 546 FENQGRGVETLSSARKKKAVQGQIRNFDRFDGGFLANCIQQR 587


>ref|XP_022020475.1| TORTIFOLIA1-like protein 4 isoform X1 [Helianthus annuus]
 gb|OTF88199.1| putative armadillo-type fold protein [Helianthus annuus]
          Length = 587

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/49 (61%), Positives = 32/49 (65%)
 Frame = +3

Query: 15  GIASNTQGGVFGSPGRSSELLLSARKKKVTQGQNRYFDRFDGGSLANCV 161
           G A N  G  FG   +S E LLS RKKK  QG NR FDRFDGGSLAN +
Sbjct: 541 GTALNAPGAEFG---KSFESLLSTRKKKAAQGHNRNFDRFDGGSLANYI 586


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