BLASTX nr result

ID: Chrysanthemum21_contig00035493 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035493
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023755592.1| pentatricopeptide repeat-containing protein ...    57   7e-07

>ref|XP_023755592.1| pentatricopeptide repeat-containing protein At5g62370 [Lactuca
           sativa]
 ref|XP_023755593.1| pentatricopeptide repeat-containing protein At5g62370 [Lactuca
           sativa]
 gb|PLY91666.1| hypothetical protein LSAT_8X8880 [Lactuca sativa]
          Length = 993

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 9/61 (14%)
 Frame = -1

Query: 248 MNKNNK--HKPHNLIASILKSLTKSFTTTPL*-------KPISTVTPCQQDHKSLCFYLA 96
           M KNN+  HKPH L  S  KS+ KSF T+PL           STVTPC++DH+SLCF LA
Sbjct: 1   MIKNNRIHHKPH-LFKSFFKSIRKSFATSPLPLSDPSSGPSFSTVTPCEEDHRSLCFSLA 59

Query: 95  E 93
           E
Sbjct: 60  E 60


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