BLASTX nr result

ID: Chrysanthemum21_contig00035483 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035483
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023735558.1| classical arabinogalactan protein 2-like [La...    62   1e-09
ref|XP_023762319.1| classical arabinogalactan protein 4-like [La...    57   2e-07

>ref|XP_023735558.1| classical arabinogalactan protein 2-like [Lactuca sativa]
 gb|PLY72554.1| hypothetical protein LSAT_2X65780 [Lactuca sativa]
          Length = 133

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -1

Query: 316 LPPSGTFADGWVNRAVIAGTALAGAFVSVTLM 221
           LPPSGTF DGWVNRAVIAGTALAGAF +VTLM
Sbjct: 102 LPPSGTFVDGWVNRAVIAGTALAGAFFAVTLM 133


>ref|XP_023762319.1| classical arabinogalactan protein 4-like [Lactuca sativa]
          Length = 126

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 25/30 (83%), Positives = 30/30 (100%)
 Frame = -1

Query: 310 PSGTFADGWVNRAVIAGTALAGAFVSVTLM 221
           PSG+FADGWVNRAVIAGTA+AG+F++VTLM
Sbjct: 97  PSGSFADGWVNRAVIAGTAVAGSFLAVTLM 126


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