BLASTX nr result

ID: Chrysanthemum21_contig00035458 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035458
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89671.1| Homeodomain-like protein [Cynara cardunculus var....   102   2e-22
ref|XP_023732676.1| transcription factor MYB3R-4-like [Lactuca s...    57   2e-06
ref|XP_021978505.1| transcription factor MYB3R-4-like [Helianthu...    55   5e-06

>gb|KVH89671.1| Homeodomain-like protein [Cynara cardunculus var. scolymus]
          Length = 919

 Score =  102 bits (254), Expect = 2e-22
 Identities = 81/201 (40%), Positives = 101/201 (50%), Gaps = 55/201 (27%)
 Frame = -1

Query: 439 GMLAQSQLLPQVSQTNHQSTPSTSSWVQQGSGD------VLEAEDISECSQG-------- 302
           G+LAQSQ LP+ S TN QST STSSWVQQ SGD      + E ED+S+CSQG        
Sbjct: 138 GLLAQSQGLPRFSHTN-QSTASTSSWVQQYSGDDSIPKDITETEDVSDCSQGSTFGGCSK 196

Query: 301 --VGNAIAVYPKNEESHHH-----------------------LPESCFSHDWVTEEKDWH 197
             + NAIA Y +NE                            + E CFSHDWVT +KDW 
Sbjct: 197 ATMANAIAGYAQNESQSAENSNQDLGSYPSSGLPCELSDSSKMVEQCFSHDWVTSDKDWQ 256

Query: 196 I-SNELH---SQDISKEEPDFISCIDVGE-------PILSS--GGNMVAVGGCDMAD--- 65
           I SNEL    S D+S E+ +FI+CIDV +       P  SS   G   ++G   +A    
Sbjct: 257 ISSNELQKIPSLDLS-EDSEFINCIDVDQNHEVAPYPTQSSVNFGASTSIGNLVVASDVA 315

Query: 64  EHMLLSSQEFYNSSNQVDGSS 2
           EHML+S  +        DGS+
Sbjct: 316 EHMLMSEDDCSRVIYPPDGST 336


>ref|XP_023732676.1| transcription factor MYB3R-4-like [Lactuca sativa]
 gb|PLY74749.1| hypothetical protein LSAT_6X69741 [Lactuca sativa]
          Length = 793

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 33/175 (18%)
 Frame = -1

Query: 439 GMLAQS-QLLPQVSQTNHQSTPSTSSWVQQG----SGDVL---EAEDISECSQGVGNAIA 284
           G+L QS Q LP V++TN  S  +++SW QQ     SGD     E EDISECSQ    +I 
Sbjct: 196 GLLPQSSQGLPPVTRTNQSS--ASTSWAQQQQQQHSGDESIRKETEDISECSQ---MSIV 250

Query: 283 VYPKNEESHHH---------------------LPESCFSHDWVTEEKDWHISNELHSQDI 167
           +YP+NE   H                      + +  FSHDW   +    I   + S D 
Sbjct: 251 MYPQNESQPHENSSQPNDFDSYPTSSLTRDSLIMDQSFSHDWEMIQ----IPISIPSLD- 305

Query: 166 SKEEPDFISCIDVG---EPILSSGGNMVAVGGCDMADEHMLLSSQEFYN-SSNQV 14
           S ++ +FI+CID+    E +L     +  +G  D+AD  ++ ++ E  N +SN+V
Sbjct: 306 STDQSEFINCIDLDQNHEAVLPY--PIENIGNDDVADVMLMSAADESENPNSNEV 358


>ref|XP_021978505.1| transcription factor MYB3R-4-like [Helianthus annuus]
 gb|OTG19629.1| putative homeodomain-like protein [Helianthus annuus]
          Length = 824

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 54/149 (36%), Positives = 65/149 (43%), Gaps = 45/149 (30%)
 Frame = -1

Query: 439 GMLAQSQLLPQVSQTNHQSTPSTSSWVQQGSGDVL--EAEDISECSQGV----------- 299
           G++A +   PQ     +QST ST SWV  G  D +    EDISECSQG            
Sbjct: 190 GLVAAAAAQPQAVGVMNQSTASTPSWVCSGDDDSVPNPKEDISECSQGSVFGAVVYQNEA 249

Query: 298 ----------GNAIAVY------PKNEESHHH-----------LPE-SCFSH----DWVT 215
                      NAI VY      P+N    H+            PE S FSH    DW  
Sbjct: 250 QPPENSSFSHNNAIVVYQNETQPPENSSFSHNNAMVVYQNETQPPENSSFSHNNNNDW-- 307

Query: 214 EEKDWHISNELHSQDISKEEPDFISCIDV 128
            +KDW     L S D+S EE +FI+CIDV
Sbjct: 308 -DKDW---QNLTSLDMS-EESEFINCIDV 331


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