BLASTX nr result

ID: Chrysanthemum21_contig00035303 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035303
         (1077 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPR96197.1| hypothetical protein GOBAR_AA24471 [Gossypium bar...    59   7e-07
gb|PPS01829.1| hypothetical protein GOBAR_AA18833 [Gossypium bar...    59   6e-06

>gb|PPR96197.1| hypothetical protein GOBAR_AA24471 [Gossypium barbadense]
          Length = 168

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
 Frame = +2

Query: 674  KRTRGQSSNTQENIADTIISWGVFTEESCQASYNDLLRQTIDSGAVLDWAFLQENDLARE 853
            KR RG  S++    A+   S+  F + S +  +  L  + I +G  +DWA +++  LA  
Sbjct: 15   KRRRGPGSSSVRATAEVRHSFLKFLQASHEELFQILRARPITTGRYIDWATVEQVQLA-- 72

Query: 854  FSNSFRRDKFTDPQWERLFRIGEPVYGELVREFHASYLPNINACQDNINFQG-IRFRLGG 1030
              N+ R    T P WER F I +P Y EL  E  +++  ++     N +  G I FRLGG
Sbjct: 73   --NTIRALLSTYP-WERFFAITKPTYLELTLELCSTF--HLQVVMTNNDDPGTIHFRLGG 127

Query: 1031 EWRAMSTLEFG 1063
              RAMS  EFG
Sbjct: 128  LVRAMSVPEFG 138


>gb|PPS01829.1| hypothetical protein GOBAR_AA18833 [Gossypium barbadense]
          Length = 359

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 44/134 (32%), Positives = 66/134 (49%)
 Frame = +2

Query: 674  KRTRGQSSNTQENIADTIISWGVFTEESCQASYNDLLRQTIDSGAVLDWAFLQENDLARE 853
            KR RG  S++    A+    +  F + S +  +  L  + + +G  +DWA +++  LA  
Sbjct: 15   KRRRGSGSSSVHATAEVRHPFLEFLQASQEELFQILRARPLTAGRCIDWATVEQVQLA-- 72

Query: 854  FSNSFRRDKFTDPQWERLFRIGEPVYGELVREFHASYLPNINACQDNINFQGIRFRLGGE 1033
              ++ R    TDP WER F I EP Y EL  E  +++   +    +N +   I FRLGG 
Sbjct: 73   --DAIRALLSTDP-WERFFTITEPTYLELTLELCSTFHLQV-VTTNNDDPSTIHFRLGGL 128

Query: 1034 WRAMSTLEFGWRLG 1075
               MS  EFG  LG
Sbjct: 129  VHVMSVPEFGVTLG 142


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