BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00035023
         (396 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ALF46577.1| GRAS protein, partial [Chrysanthemum x morifolium]     100   6e-22
gb|KVI02725.1| Transcription factor GRAS [Cynara cardunculus var...    69   6e-11
ref|XP_023754665.1| protein SHORT-ROOT-like [Lactuca sativa]           69   6e-11
dbj|GAV83517.1| GRAS domain-containing protein [Cephalotus folli...    58   3e-07
ref|XP_010444919.2| PREDICTED: protein SHORT-ROOT-like, partial ...    57   5e-07
ref|XP_010446640.1| PREDICTED: protein SHORT-ROOT-like [Camelina...    57   9e-07
ref|XP_019086969.1| PREDICTED: protein SHORT-ROOT-like [Camelina...    57   1e-06
ref|XP_010432042.1| PREDICTED: protein SHORT-ROOT [Camelina sativa]    57   1e-06
ref|XP_006283511.1| protein SHORT-ROOT [Capsella rubella] >gi|48...    57   1e-06
ref|NP_195480.1| GRAS family transcription factor [Arabidopsis t...    57   1e-06
ref|XP_002868978.1| protein SHORT-ROOT [Arabidopsis lyrata subsp...    57   1e-06
ref|XP_021714468.1| protein SHORT-ROOT-like [Chenopodium quinoa]       56   2e-06
gb|PNY02113.1| protein SHORT-ROOT-like [Trifolium pratense]            55   3e-06
ref|XP_021751410.1| protein SHORT-ROOT-like [Chenopodium quinoa]       55   4e-06

>gb|ALF46577.1| GRAS protein, partial [Chrysanthemum x morifolium]
          Length = 534

 Score =  100 bits (248), Expect = 6e-22
 Identities = 50/80 (62%), Positives = 50/80 (62%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLVTFQKQ         SF                     PYHFNYQQPQEQEEC
Sbjct: 1   MDTLFRLVTFQKQHHPHHPHPHSFNNSTTTTTTNSSSSRSSTQQTPYHFNYQQPQEQEEC 60

Query: 337 FNFFMDEEDYSSSSRHHQNQ 396
           FNFFMDEEDYSSSSRHHQNQ
Sbjct: 61  FNFFMDEEDYSSSSRHHQNQ 80


>gb|KVI02725.1| Transcription factor GRAS [Cynara cardunculus var. scolymus]
          Length = 540

 Score = 68.9 bits (167), Expect = 6e-11
 Identities = 39/84 (46%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXS--FXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQE 330
           MDTLFRLV+ QKQ                                  P+HFNYQQ ++QE
Sbjct: 1   MDTLFRLVSLQKQPSHHHHHHHHPLTNSTSRTNSNSSKSSNHHTTTPPFHFNYQQEEDQE 60

Query: 331 ECFNFFMDEEDYSSSS--RHHQNQ 396
           ECFNFFMDEED+SSSS   HH NQ
Sbjct: 61  ECFNFFMDEEDFSSSSSRHHHHNQ 84


>ref|XP_023754665.1| protein SHORT-ROOT-like [Lactuca sativa]
          Length = 546

 Score = 68.9 bits (167), Expect = 6e-11
 Identities = 42/86 (48%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXX----PYHFNYQQPQE 324
           MDTLFRLV+ QKQ                                    PYHFNYQQ ++
Sbjct: 1   MDTLFRLVSLQKQPSHHHHHHHLHQHQQQHHSINSTSRTSSSSRSSTQPPYHFNYQQGED 60

Query: 325 QEECFNFFMDEEDY-SSSSRH-HQNQ 396
           QEECFNFFMDEED+ SSSSRH HQNQ
Sbjct: 61  QEECFNFFMDEEDFSSSSSRHPHQNQ 86


>dbj|GAV83517.1| GRAS domain-containing protein [Cephalotus follicularis]
          Length = 509

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 33/77 (42%), Positives = 40/77 (51%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+FQ+Q+        SF                      ++ N+   QE EEC
Sbjct: 1   MDTLFRLVSFQQQEQQQQQSDQSFNSSRTSSSSRSSRQNN------HNRNHHYQQEDEEC 54

Query: 337 FNFFMDEEDYSSSSRHH 387
           FNFFMDEED+SSSS  H
Sbjct: 55  FNFFMDEEDFSSSSSKH 71


>ref|XP_010444919.2| PREDICTED: protein SHORT-ROOT-like, partial [Camelina sativa]
          Length = 235

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVAEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|XP_010446640.1| PREDICTED: protein SHORT-ROOT-like [Camelina sativa]
          Length = 530

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVAEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|XP_019086969.1| PREDICTED: protein SHORT-ROOT-like [Camelina sativa]
          Length = 530

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVVEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|XP_010432042.1| PREDICTED: protein SHORT-ROOT [Camelina sativa]
          Length = 530

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVVEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|XP_006283511.1| protein SHORT-ROOT [Capsella rubella]
 gb|EOA16409.1| hypothetical protein CARUB_v10004568mg [Capsella rubella]
          Length = 531

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVVEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|NP_195480.1| GRAS family transcription factor [Arabidopsis thaliana]
 sp|Q9SZF7.1|SHR_ARATH RecName: Full=Protein SHORT-ROOT; Short=AtSHR; AltName: Full=GRAS
           family protein 26; Short=AtGRAS-26; AltName:
           Full=Protein SHOOT GRAVITROPISM 7
 gb|AAF75234.1|AF233752_1 short-root protein [Arabidopsis thaliana]
 emb|CAB38304.1| putative protein [Arabidopsis thaliana]
 emb|CAB80430.1| putative protein [Arabidopsis thaliana]
 gb|ACE62894.1| At4g37650 [Arabidopsis thaliana]
 gb|AEE86820.1| GRAS family transcription factor [Arabidopsis thaliana]
 gb|OAO98184.1| SHR [Arabidopsis thaliana]
          Length = 531

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVVEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|XP_002868978.1| protein SHORT-ROOT [Arabidopsis lyrata subsp. lyrata]
 gb|EFH45237.1| hypothetical protein ARALYDRAFT_912572 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 531

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/79 (40%), Positives = 37/79 (46%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+ Q+Q                                 YH+N+ Q    EEC
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQ------SSLSRTSTTTTGSPQTAYHYNFPQNDVVEEC 54

Query: 337 FNFFMDEEDYSSSSRHHQN 393
           FNFFMDEED SSSS HH +
Sbjct: 55  FNFFMDEEDLSSSSSHHNH 73


>ref|XP_021714468.1| protein SHORT-ROOT-like [Chenopodium quinoa]
          Length = 543

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
 Frame = +1

Query: 157 MDTLFRLVTFQ------KQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXP-YHFNYQQ 315
           MDTLFRLV+FQ      +Q         SF                       YHF+ Q 
Sbjct: 1   MDTLFRLVSFQQTHPQPQQQQLSSDNQSSFNNSNSSSSSIISSKHSTHNSNNYYHFHQQH 60

Query: 316 PQEQEECFNFFMDEEDYSSSSRHHQNQ 396
             + EECFNFFMDEED+SSSS H++ Q
Sbjct: 61  YPQDEECFNFFMDEEDFSSSSSHNKQQ 87


>gb|PNY02113.1| protein SHORT-ROOT-like [Trifolium pratense]
          Length = 492

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 37/77 (48%)
 Frame = +1

Query: 157 MDTLFRLVTFQKQDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQPQEQEEC 336
           MDTLFRLV+FQ Q         S                        H+ Y+Q  ++EEC
Sbjct: 1   MDTLFRLVSFQHQHQPDHHHHQSLNSTTSITTTSSSSKSSKQNYHQNHY-YEQHHQEEEC 59

Query: 337 FNFFMDEEDYSSSSRHH 387
           FNFFMDEED SSSS  H
Sbjct: 60  FNFFMDEEDLSSSSSKH 76


>ref|XP_021751410.1| protein SHORT-ROOT-like [Chenopodium quinoa]
          Length = 543

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
 Frame = +1

Query: 157 MDTLFRLVTFQK------QDXXXXXXXXSFXXXXXXXXXXXXXXXXXXXXXPYHFNYQQP 318
           MDTLFRLV+FQ+      Q         SF                       +++Y Q 
Sbjct: 1   MDTLFRLVSFQQTHPQPQQQQLSSDNQSSFNNSNSSSSSIISSKHSTHNSNNNYYHYHQH 60

Query: 319 QEQ------EECFNFFMDEEDYSSSSRHHQNQ 396
           Q+Q      EECFNFFMDEED+SSSS H++ Q
Sbjct: 61  QQQQHFPQDEECFNFFMDEEDFSSSSSHNKQQ 92