BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034907
         (408 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI07429.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]   110   3e-25
ref|XP_021992348.1| pentatricopeptide repeat-containing protein ...   105   8e-24
ref|XP_021990799.1| pentatricopeptide repeat-containing protein ...    97   8e-21
ref|XP_023753329.1| pentatricopeptide repeat-containing protein ...    75   7e-13
ref|XP_023753327.1| pentatricopeptide repeat-containing protein ...    75   7e-13

>gb|KVI07429.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]
          Length = 874

 Score =  110 bits (274), Expect = 3e-25
 Identities = 64/117 (54%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
 Frame = -3

Query: 403 MDNFSFASSTTHYCSTFSGKPYSVSATTLPYHPITTACSHDSD--XXXXXXXXXXXXXXN 230
           MDNFS ASST HYCSTFSGKPYS+SATTLP++ ITT C HDS+                N
Sbjct: 1   MDNFSLASSTPHYCSTFSGKPYSISATTLPFYSITTCC-HDSENPSTTSSSSSIRRPTNN 59

Query: 229 KPFXXXXXXXXXXXXXXXXXXXXXPLQTILN--PKRHPVDNKSQTLTDKLWLTSKLS 65
           KPF                     PLQT+LN  PKR+P+DN SQTLT+KLWLTSKLS
Sbjct: 60  KPFKPIANSPINPHPPKPKTHITNPLQTLLNPTPKRNPIDNNSQTLTEKLWLTSKLS 116


>ref|XP_021992348.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Helianthus annuus]
 gb|OTG06630.1| putative tetratricopeptide-like helical domain, Nucleotide-binding
           alpha-beta plait domain protein [Helianthus annuus]
          Length = 943

 Score =  105 bits (263), Expect = 8e-24
 Identities = 61/118 (51%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
 Frame = -3

Query: 403 MDNFSFASSTTHYCSTFSGKPYSVS---ATTLPYHPITTACSHDSDXXXXXXXXXXXXXX 233
           MDNFS ASSTTHYCSTF+ KPYS+S    TT+P++ ITT CSHDS+              
Sbjct: 1   MDNFSLASSTTHYCSTFTSKPYSMSTRTVTTIPFYSITT-CSHDSENLTTTSSSLRRPTN 59

Query: 232 NKPFXXXXXXXXXXXXXXXXXXXXXPLQTILN--PKRHPVDNKSQTLTDKLWLTSKLS 65
           N+PF                     PLQT+LN  PKR+P+DN SQTLT+KLWLTSKLS
Sbjct: 60  NRPFKPIANSPVNPHRPQPKTHNTNPLQTLLNPTPKRNPIDNSSQTLTEKLWLTSKLS 117


>ref|XP_021990799.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Helianthus annuus]
          Length = 1032

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 397 NFSFASSTTHYCSTFSGKPYSVS---ATTLPYHPITTACSHDSDXXXXXXXXXXXXXXNK 227
           N+  ASSTTHYCSTF+ KPY  S   ATT+P++ ITT CSHDS+              N+
Sbjct: 96  NYVIASSTTHYCSTFTSKPYPTSTRTATTIPFYSITT-CSHDSENLTTTSSSLRRPANNR 154

Query: 226 PFXXXXXXXXXXXXXXXXXXXXXPLQTILNP--KRHPVDNKSQTLTDKLWLTSKLS 65
           PF                     PLQT+LNP  KR+P+DN SQTLT+KLWLTSKLS
Sbjct: 155 PFKPIANSPVNPHRPKPKTHNTNPLQTLLNPTPKRNPIDNSSQTLTEKLWLTSKLS 210


>ref|XP_023753329.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X2 [Lactuca sativa]
          Length = 790

 Score = 74.7 bits (182), Expect = 7e-13
 Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
 Frame = -3

Query: 403 MDNFSFASSTTHYCSTFSGKPYSVSATTLPYHPITTACSHDSD-------XXXXXXXXXX 245
           M+NFS ASSTT+ CSTFSGKPYS+S +TLP++ I TACSHDS+                 
Sbjct: 1   MNNFSLASSTTYCCSTFSGKPYSLS-STLPFYSI-TACSHDSENPTTTSTSTSTSTSTST 58

Query: 244 XXXXNKPFXXXXXXXXXXXXXXXXXXXXXPLQTILNPKRHPV--DNKSQTLTDKLWLTSK 71
                +P                          +   KR+P+  +N SQTLT+KLWLTSK
Sbjct: 59  SSSLRRPTNNKPPFKPITTNPHPPKPKTHITNPLQTLKRNPIGNNNNSQTLTEKLWLTSK 118

Query: 70  LS 65
           LS
Sbjct: 119 LS 120


>ref|XP_023753327.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Lactuca sativa]
 ref|XP_023753328.1| pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Lactuca sativa]
          Length = 953

 Score = 74.7 bits (182), Expect = 7e-13
 Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
 Frame = -3

Query: 403 MDNFSFASSTTHYCSTFSGKPYSVSATTLPYHPITTACSHDSD-------XXXXXXXXXX 245
           M+NFS ASSTT+ CSTFSGKPYS+S +TLP++ I TACSHDS+                 
Sbjct: 1   MNNFSLASSTTYCCSTFSGKPYSLS-STLPFYSI-TACSHDSENPTTTSTSTSTSTSTST 58

Query: 244 XXXXNKPFXXXXXXXXXXXXXXXXXXXXXPLQTILNPKRHPV--DNKSQTLTDKLWLTSK 71
                +P                          +   KR+P+  +N SQTLT+KLWLTSK
Sbjct: 59  SSSLRRPTNNKPPFKPITTNPHPPKPKTHITNPLQTLKRNPIGNNNNSQTLTEKLWLTSK 118

Query: 70  LS 65
           LS
Sbjct: 119 LS 120