BLASTX nr result

ID: Chrysanthemum21_contig00034593 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034593
         (430 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY67551.1| hypothetical protein LSAT_3X42480 [Lactuca sativa]      57   1e-07

>gb|PLY67551.1| hypothetical protein LSAT_3X42480 [Lactuca sativa]
          Length = 106

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
 Frame = +1

Query: 79  ISRPITCRPLHATVKQ--EVDQSKGQF----DELAPAESPEGLEGGHEVMEHEKXXXXXX 240
           I RP T RP+   VKQ  E+DQ+          L PAESP+G +  H++    K      
Sbjct: 18  IFRPTTARPI---VKQSREIDQTLPALAPDSPSLVPAESPDGSDLDHDLQT--KKHHHSS 72

Query: 241 XXXXXXXXXXLVTVTFAAVYCYIRVTRRRDADKH 342
                     LVT+ FAAVYCYIRVTR+R+ + H
Sbjct: 73  VAGGGVIVGGLVTIAFAAVYCYIRVTRKREGEYH 106


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