BLASTX nr result

ID: Chrysanthemum21_contig00034403 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034403
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY66443.1| hypothetical protein LSAT_5X176380 [Lactuca sativa]     66   7e-10
ref|XP_023743411.1| formin-like protein 1 [Lactuca sativa]             66   7e-10
gb|KVI03767.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]    63   6e-09

>gb|PLY66443.1| hypothetical protein LSAT_5X176380 [Lactuca sativa]
          Length = 912

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 52/135 (38%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
 Frame = -3

Query: 386 SEADEEGFDEFYSPRESIGTGSGSRSAFASVPVESYGAKRGM-EXXXXXXXXXXXXXXXX 210
           S  DEE  +EFYSPR+SIGTGSGSR+AFA+VPV++Y ++R +                  
Sbjct: 259 SSRDEE-LEEFYSPRDSIGTGSGSRAAFAAVPVDTYDSRRIIGSGSSSSCSSSSSGSPAR 317

Query: 209 XXXXXXXXXXXXXXXXXXPKSPELVAIQN---------XXXXXXXXXXXXXXPSRDIKLR 57
                             PKSP+L AIQ                        P  DI+L 
Sbjct: 318 SVSLSISPPVSLSPIRSRPKSPDLDAIQTAPPPTRLAPPPPPPPPPPQPLVIPPPDIRLS 377

Query: 56  KDSLESSPRLSDTDS 12
           KDSLESSPRLSD+ S
Sbjct: 378 KDSLESSPRLSDSSS 392


>ref|XP_023743411.1| formin-like protein 1 [Lactuca sativa]
          Length = 926

 Score = 65.9 bits (159), Expect = 7e-10
 Identities = 52/135 (38%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
 Frame = -3

Query: 386 SEADEEGFDEFYSPRESIGTGSGSRSAFASVPVESYGAKRGM-EXXXXXXXXXXXXXXXX 210
           S  DEE  +EFYSPR+SIGTGSGSR+AFA+VPV++Y ++R +                  
Sbjct: 273 SSRDEE-LEEFYSPRDSIGTGSGSRAAFAAVPVDTYDSRRIIGSGSSSSCSSSSSGSPAR 331

Query: 209 XXXXXXXXXXXXXXXXXXPKSPELVAIQN---------XXXXXXXXXXXXXXPSRDIKLR 57
                             PKSP+L AIQ                        P  DI+L 
Sbjct: 332 SVSLSISPPVSLSPIRSRPKSPDLDAIQTAPPPTRLAPPPPPPPPPPQPLVIPPPDIRLS 391

Query: 56  KDSLESSPRLSDTDS 12
           KDSLESSPRLSD+ S
Sbjct: 392 KDSLESSPRLSDSSS 406


>gb|KVI03767.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]
          Length = 596

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 53/142 (37%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
 Frame = -3

Query: 386 SEADEEGFDEFYSPRESIGTGSGSRSAFASVPVESYGAKRGM-EXXXXXXXXXXXXXXXX 210
           S  DEE F+EFYSPR SIGTGSGSRSAFA+VPV++Y ++R +                  
Sbjct: 269 SSRDEE-FEEFYSPRGSIGTGSGSRSAFAAVPVDNYESRRIIGSGSSSSCSSSSSGSPAR 327

Query: 209 XXXXXXXXXXXXXXXXXXPKSPELVAIQN----------------XXXXXXXXXXXXXXP 78
                             PKSP+LVAIQ                               P
Sbjct: 328 SVSLSISPPVSLSPIRSRPKSPDLVAIQTTPPPSSLAPPPPPPPPPPPPPPPPPQPLLIP 387

Query: 77  SRDIKLRKDSLESSPRLSDTDS 12
           S +I+L KDSLESSPR S++ S
Sbjct: 388 SLNIRLSKDSLESSPRSSNSSS 409


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