BLASTX nr result

ID: Chrysanthemum21_contig00034353 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034353
         (367 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01415.1| Homeodomain-like protein [Cynara cardunculus var....   103   3e-23
ref|XP_023765467.1| pathogenesis-related homeodomain protein iso...    79   1e-14
ref|XP_023765464.1| pathogenesis-related homeodomain protein iso...    79   1e-14
ref|XP_022027612.1| pathogenesis-related homeodomain protein [He...    62   9e-09

>gb|KVI01415.1| Homeodomain-like protein [Cynara cardunculus var. scolymus]
          Length = 707

 Score =  103 bits (257), Expect = 3e-23
 Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 9/109 (8%)
 Frame = +1

Query: 61  MSGEGAEEAHKNIGKLLH-----SKSLTKRSIKRKSHGNTQSTPVSKKKVVDYLTNSKRN 225
           M+G   +EA +NIGKL+H      KS  KRS K K HGNT S+P+SKKK+VD LTNSK+ 
Sbjct: 1   MTGAETKEAPENIGKLVHLQSSTPKSYAKRSRKLKPHGNTLSSPMSKKKLVDLLTNSKKK 60

Query: 226 DFKHINASRKPAKSMSMTSLEGDQNQ----AATGSDENANFEKGNFTSE 360
           +FK  NAS K +KS+S  SL   QNQ    AATGS+EN   EKG+ TSE
Sbjct: 61  EFKRRNASNKASKSLSKPSLVSCQNQKKQLAATGSNENEKCEKGDPTSE 109


>ref|XP_023765467.1| pathogenesis-related homeodomain protein isoform X2 [Lactuca
           sativa]
          Length = 580

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 47/102 (46%), Positives = 63/102 (61%)
 Frame = +1

Query: 61  MSGEGAEEAHKNIGKLLHSKSLTKRSIKRKSHGNTQSTPVSKKKVVDYLTNSKRNDFKHI 240
           M+G   +E  KNIGKLLHSK  T++   ++S      TP+SK+K+V++LTNSKRNDFK  
Sbjct: 1   MTGVETKETRKNIGKLLHSKCSTQKLHTKRSR--KPKTPMSKEKLVEFLTNSKRNDFKCR 58

Query: 241 NASRKPAKSMSMTSLEGDQNQAATGSDENANFEKGNFTSENI 366
           NAS K  KS+   S+   QNQ     +E A  E  + TSE +
Sbjct: 59  NASHKTIKSLINPSITTFQNQ-----EETAKCENTDLTSEKL 95


>ref|XP_023765464.1| pathogenesis-related homeodomain protein isoform X1 [Lactuca
           sativa]
 ref|XP_023765465.1| pathogenesis-related homeodomain protein isoform X1 [Lactuca
           sativa]
 ref|XP_023765466.1| pathogenesis-related homeodomain protein isoform X1 [Lactuca
           sativa]
 gb|PLY84231.1| hypothetical protein LSAT_7X56301 [Lactuca sativa]
          Length = 650

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 47/102 (46%), Positives = 63/102 (61%)
 Frame = +1

Query: 61  MSGEGAEEAHKNIGKLLHSKSLTKRSIKRKSHGNTQSTPVSKKKVVDYLTNSKRNDFKHI 240
           M+G   +E  KNIGKLLHSK  T++   ++S      TP+SK+K+V++LTNSKRNDFK  
Sbjct: 1   MTGVETKETRKNIGKLLHSKCSTQKLHTKRSR--KPKTPMSKEKLVEFLTNSKRNDFKCR 58

Query: 241 NASRKPAKSMSMTSLEGDQNQAATGSDENANFEKGNFTSENI 366
           NAS K  KS+   S+   QNQ     +E A  E  + TSE +
Sbjct: 59  NASHKTIKSLINPSITTFQNQ-----EETAKCENTDLTSEKL 95


>ref|XP_022027612.1| pathogenesis-related homeodomain protein [Helianthus annuus]
 ref|XP_022027613.1| pathogenesis-related homeodomain protein [Helianthus annuus]
 ref|XP_022027614.1| pathogenesis-related homeodomain protein [Helianthus annuus]
 ref|XP_022027615.1| pathogenesis-related homeodomain protein [Helianthus annuus]
 gb|OTG30527.1| putative homeodomain-like, Zinc finger, FYVE/PHD-type, Zinc finger,
           RING/FYVE/PHD-type [Helianthus annuus]
          Length = 697

 Score = 62.4 bits (150), Expect = 9e-09
 Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +1

Query: 79  EEAHKNIGKLLHSKSLT-----KRSIKRKSHGNTQSTPVSKKKVVDYLTNSKRNDFKHIN 243
           EEA +NIGK  HSKS+T     KRS K KSH        SK K+VD+LTNSK  DF+H N
Sbjct: 2   EEAQENIGKSPHSKSITTESCAKRSRKLKSH--------SKNKIVDFLTNSKNKDFEHTN 53

Query: 244 ASRKPAKSMSMTSLEGDQNQAATGSDENANFEKGNFTSE 360
                A+S+S   L   QNQ            KG+F+SE
Sbjct: 54  V----AESLSNPFLVNCQNQ------------KGDFSSE 76


Top