BLASTX nr result

ID: Chrysanthemum21_contig00034218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034218
         (354 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN40231.1| DEAD-box ATP-dependent RNA helicase 21 [Glycine s...    61   5e-10
gb|KMZ76390.1| ATP-dependent RNA helicase [Zostera marina]             64   2e-09
gb|PLY85442.1| hypothetical protein LSAT_3X33041 [Lactuca sativa]      63   4e-09
gb|PHT56325.1| putative DEAD-box ATP-dependent RNA helicase 44 [...    63   4e-09
ref|XP_016560208.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   4e-09
ref|XP_006348179.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   4e-09
gb|PNT00258.1| hypothetical protein POPTR_015G037200v3 [Populus ...    63   4e-09
ref|XP_002322111.2| DEAD box RNA helicase family protein [Populu...    63   4e-09
ref|XP_004232673.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    63   4e-09
gb|KVH95742.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal ...    63   4e-09
emb|CDP11000.1| unnamed protein product [Coffea canephora]             63   4e-09
ref|XP_023763857.1| DEAD-box ATP-dependent RNA helicase 21 [Lact...    63   4e-09
ref|XP_011086521.1| DEAD-box ATP-dependent RNA helicase 21 [Sesa...    63   4e-09
gb|EPS62675.1| hypothetical protein M569_12111 [Genlisea aurea]        63   4e-09
gb|PHU26735.1| DEAD-box ATP-dependent RNA helicase 21 [Capsicum ...    63   4e-09
ref|XP_008643623.1| ATP-dependent RNA helicase DDX23 isoform X1 ...    63   4e-09
ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays] ...    63   4e-09
gb|KDO36143.1| hypothetical protein CISIN_1g037139mg, partial [C...    60   5e-09
ref|XP_001765435.1| predicted protein [Physcomitrella patens]          63   5e-09
gb|EMS59667.1| DEAD-box ATP-dependent RNA helicase 21 [Triticum ...    63   5e-09

>gb|KHN40231.1| DEAD-box ATP-dependent RNA helicase 21 [Glycine soja]
          Length = 81

 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPG+IPDRPPRRN+
Sbjct: 39  LKQMLIQSNSPVPPELARHEASKFKPGTIPDRPPRRND 76


>gb|KMZ76390.1| ATP-dependent RNA helicase [Zostera marina]
          Length = 734

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S C VPPEL+RHEASKFKPG IPDRPPRRN+
Sbjct: 692 LKQMLVQSNCPVPPELSRHEASKFKPGGIPDRPPRRND 729


>gb|PLY85442.1| hypothetical protein LSAT_3X33041 [Lactuca sativa]
          Length = 534

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 492 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 529


>gb|PHT56325.1| putative DEAD-box ATP-dependent RNA helicase 44 [Capsicum baccatum]
          Length = 693

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 651 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 688


>ref|XP_016560208.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Capsicum annuum]
 gb|PHT90843.1| DEAD-box ATP-dependent RNA helicase 21 [Capsicum annuum]
          Length = 697

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 655 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 692


>ref|XP_006348179.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Solanum
           tuberosum]
          Length = 707

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 665 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 702


>gb|PNT00258.1| hypothetical protein POPTR_015G037200v3 [Populus trichocarpa]
          Length = 708

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S  SVPPELARHEASKFKPG+IPDRPPRRN+
Sbjct: 666 LKQMLIQSNSSVPPELARHEASKFKPGTIPDRPPRRND 703


>ref|XP_002322111.2| DEAD box RNA helicase family protein [Populus trichocarpa]
          Length = 710

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S  SVPPELARHEASKFKPG+IPDRPPRRN+
Sbjct: 668 LKQMLIQSNSSVPPELARHEASKFKPGTIPDRPPRRND 705


>ref|XP_004232673.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Solanum
           lycopersicum]
 ref|XP_015065775.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Solanum
           pennellii]
          Length = 711

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 669 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 706


>gb|KVH95742.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal [Cynara
           cardunculus var. scolymus]
          Length = 714

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 672 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 709


>emb|CDP11000.1| unnamed protein product [Coffea canephora]
          Length = 716

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 674 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 711


>ref|XP_023763857.1| DEAD-box ATP-dependent RNA helicase 21 [Lactuca sativa]
          Length = 718

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 676 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 713


>ref|XP_011086521.1| DEAD-box ATP-dependent RNA helicase 21 [Sesamum indicum]
          Length = 720

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 678 LKQMLMQSNSPVPPELARHEASKFKPGSIPDRPPRRND 715


>gb|EPS62675.1| hypothetical protein M569_12111 [Genlisea aurea]
          Length = 722

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S  +VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 680 LKQMLIQSNSAVPPELARHEASKFKPGSIPDRPPRRND 717


>gb|PHU26735.1| DEAD-box ATP-dependent RNA helicase 21 [Capsicum chinense]
          Length = 732

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 690 LKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRND 727


>ref|XP_008643623.1| ATP-dependent RNA helicase DDX23 isoform X1 [Zea mays]
 ref|XP_020408917.1| ATP-dependent RNA helicase DDX23 isoform X1 [Zea mays]
 gb|ACN26564.1| unknown [Zea mays]
 gb|AQK63563.1| DEAD-box ATP-dependent RNA helicase 21 [Zea mays]
          Length = 734

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 691 LKQMLMQSNSPVPPELARHEASKFKPGSIPDRPPRRND 728


>ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays]
 gb|ACG29092.1| ATP-dependent RNA helicase DDX23 [Zea mays]
          Length = 736

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 693 LKQMLMQSNSPVPPELARHEASKFKPGSIPDRPPRRND 730


>gb|KDO36143.1| hypothetical protein CISIN_1g037139mg, partial [Citrus sinensis]
          Length = 135

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELA+HEASKFKPG+IPDRPPRRN+
Sbjct: 93  LKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRND 130


>ref|XP_001765435.1| predicted protein [Physcomitrella patens]
          Length = 535

 Score = 62.8 bits (151), Expect = 5e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGSIPDRPPRRN+
Sbjct: 492 LKQMLVQSNSPVPPELARHEASKFKPGSIPDRPPRRND 529


>gb|EMS59667.1| DEAD-box ATP-dependent RNA helicase 21 [Triticum urartu]
          Length = 656

 Score = 62.8 bits (151), Expect = 5e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -3

Query: 274 MKQDVKDSMCSVPPELARHEASKFKPGSIPDRPPRRNN 161
           +KQ +  S   VPPELARHEASKFKPGS+PDRPPRRN+
Sbjct: 613 LKQMLTQSNSPVPPELARHEASKFKPGSVPDRPPRRND 650


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