BLASTX nr result

ID: Chrysanthemum21_contig00034104 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034104
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY89749.1| hypothetical protein LSAT_1X50361 [Lactuca sativa]      55   8e-06

>gb|PLY89749.1| hypothetical protein LSAT_1X50361 [Lactuca sativa]
          Length = 356

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = -2

Query: 314 IGVLGKGMKVNSAEPCEVIVEQHKVLNITVASLW-VESDIGEPVCVHFHFPDKHPAFIKL 138
           I +L  G ++ S +  +V++ + KVL+++ A L   + +  E VC+H     K      L
Sbjct: 38  ISILEIGAEIKSGQSFDVVIGEGKVLHLSQACLGEAKKETKESVCMHMTMDGKKLVLGTL 97

Query: 137 DPIRKPNQALDLLFDESFSITQNSKDGTSVF*EGFIYEQLAKDDE 3
            P + P Q  DL+FD+ F ++ NSK+ +S++  G+  +  A D+E
Sbjct: 98  IPEKIPQQLFDLVFDKDFKVSHNSKN-SSIYLYGYKADNPADDNE 141


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