BLASTX nr result

ID: Chrysanthemum21_contig00034006 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034006
         (536 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU47014.1| hypothetical protein TSUD_403240 [Trifolium subt...    58   2e-06
ref|XP_003592631.2| DUF223 domain protein [Medicago truncatula] ...    56   3e-06
gb|PNY04276.1| ATP-dependent DNA helicase PIF1, partial [Trifoli...    56   9e-06

>dbj|GAU47014.1| hypothetical protein TSUD_403240 [Trifolium subterraneum]
          Length = 1765

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/92 (32%), Positives = 45/92 (48%)
 Frame = -2

Query: 526 KKDLMFRFEPLFEEGQCYVISNFGIAENCGRLPLLPHKYKFSFFRATQVTRVYPFDKYVN 347
           KKDL+F+F+ + EEG  YVI  F +A+N       PHK+K +F R T V +V   +   N
Sbjct: 137 KKDLIFQFKDVIEEGAAYVIERFMVAKNDSSFKTTPHKHKLNFMRGTSVFKVTATEIPAN 196

Query: 346 RFILEPFNSLFDDNRHYHDHDSVGTPAVHNAL 251
            F    F  +   ++     D +G     N +
Sbjct: 197 HFQFMSFQEILASSKEDQYLDVIGHVVEKNVI 228


>ref|XP_003592631.2| DUF223 domain protein [Medicago truncatula]
 gb|AES62882.2| DUF223 domain protein [Medicago truncatula]
          Length = 210

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/112 (27%), Positives = 54/112 (48%)
 Frame = -2

Query: 526 KKDLMFRFEPLFEEGQCYVISNFGIAENCGRLPLLPHKYKFSFFRATQVTRVYPFDKYVN 347
           +KDL+ +F  + +EG  Y + N  +  N     +  HK+K      +  T+V+     +N
Sbjct: 37  RKDLVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLKMMHNSTFTKVHSPSIPMN 96

Query: 346 RFILEPFNSLFDDNRHYHDHDSVGTPAVHNALFGSKSFINRNIPDITSFKTR 191
            F  +PFN +        +  S G   V NA  G+K  +N ++PD+ ++ TR
Sbjct: 97  VFKFKPFNEILSST---VEEVSTGAMGVANAFNGTKLILNGDLPDVAAYMTR 145


>gb|PNY04276.1| ATP-dependent DNA helicase PIF1, partial [Trifolium pratense]
          Length = 2108

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/92 (31%), Positives = 45/92 (48%)
 Frame = -2

Query: 526 KKDLMFRFEPLFEEGQCYVISNFGIAENCGRLPLLPHKYKFSFFRATQVTRVYPFDKYVN 347
           +KDL+ +F+   EEG  YV+  F + +N       PHK+K +F R T++ +V   D   N
Sbjct: 320 RKDLLSQFKDDIEEGAAYVVERFMVGKNDSSFKSTPHKHKLNFMRGTKMIKVKATDIPPN 379

Query: 346 RFILEPFNSLFDDNRHYHDHDSVGTPAVHNAL 251
            F   PF+ +    R     D +G     NA+
Sbjct: 380 HFNFMPFSEILASTREDQFLDVIGHVVEKNAM 411


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