BLASTX nr result

ID: Chrysanthemum21_contig00034004 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00034004
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH87451.1| hypothetical protein Ccrd_025314, partial [Cynara...    60   1e-07
gb|KVH87638.1| Leucine-rich repeat-containing protein, partial [...    58   5e-07
ref|XP_022033599.1| TMV resistance protein N-like isoform X1 [He...    57   9e-07
gb|KVH87637.1| Leucine-rich repeat-containing protein, partial [...    57   2e-06
gb|KVH91077.1| Leucine-rich repeat-containing protein, partial [...    56   2e-06
gb|KVI05548.1| Leucine-rich repeat-containing protein [Cynara ca...    55   5e-06
gb|KVI05554.1| Leucine-rich repeat-containing protein [Cynara ca...    54   9e-06
gb|KVI05552.1| hypothetical protein Ccrd_016170, partial [Cynara...    54   1e-05

>gb|KVH87451.1| hypothetical protein Ccrd_025314, partial [Cynara cardunculus var.
           scolymus]
          Length = 500

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
 Frame = -1

Query: 424 NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
           NMD++V L L+  GI+ +PSS G+YCTN            +S++ N            AG
Sbjct: 95  NMDNMVELSLDRTGIKXVPSSFGKYCTNLLSLDLGYCIILESIEGNFHHLKHLKKFSIAG 154

Query: 244 FTQLEKNPKDLFNEKCFLEELLFNLKYYSESXXXXXXXXXXXXXXXXXXLSGLK----DG 77
             +L+  P+ LF+  C LE L  +L  +                     L  +     +G
Sbjct: 155 CKKLKIPPEGLFDVTCCLEVLALSLTSFKNLHPGIVSMKFLGFPPSLRRLRLVSCDWING 214

Query: 76  EIPCEIGELSNLQELHLCHNDFTRL 2
           +I     ELSNLQ L+L  N+F+RL
Sbjct: 215 DISSVFCELSNLQVLNLQENNFSRL 239


>gb|KVH87638.1| Leucine-rich repeat-containing protein, partial [Cynara cardunculus
           var. scolymus]
          Length = 496

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
 Frame = -1

Query: 424 NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
           NMD+++ L L    I+V+PSS G+YCTN            +S++ N            A 
Sbjct: 95  NMDNMIELSLTGTEIKVVPSSFGKYCTNLLSLDLGSCNGLESIEGNFHHLKHLKKFSIAS 154

Query: 244 FTQLEKNPKDLFNEKCFLEEL-LFNLKYYSESXXXXXXXXXXXXXXXXXXLSGLKD---G 77
             +L+  P+ LF+  C LE L LF+  + +                      G  D   G
Sbjct: 155 CKKLKIPPEGLFDVTCCLEVLNLFDTSFKNLHPGIISMKFLGFPPSLRRLGIGSCDRING 214

Query: 76  EIPCEIGELSNLQELHLCHNDFTRL 2
           +I     ELSNLQ L+L  NDF+RL
Sbjct: 215 DISSIFCELSNLQVLNLQQNDFSRL 239


>ref|XP_022033599.1| TMV resistance protein N-like isoform X1 [Helianthus annuus]
 gb|OTG27010.1| putative NB-ARC [Helianthus annuus]
          Length = 982

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 45/141 (31%), Positives = 60/141 (42%)
 Frame = -1

Query: 424  NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
            NM SLV L L  +GIEVLPS++G +C N            KS++ N             G
Sbjct: 693  NMKSLVKLCLEYIGIEVLPSTIGDHCANLISLYLSYLDHLKSIEFNFDALKHLKELELEG 752

Query: 244  FTQLEKNPKDLFNEKCFLEELLFNLKYYSESXXXXXXXXXXXXXXXXXXLSGLKDGEIPC 65
              QLEK     F+      +LL +L+                          LKD + P 
Sbjct: 753  LIQLEKTRHQSFH------QLLRSLR------------------KLDLGSCRLKDSDFPI 788

Query: 64   EIGELSNLQELHLCHNDFTRL 2
             I +L NLQ L+L +NDF+RL
Sbjct: 789  TIVDLPNLQVLNLSNNDFSRL 809


>gb|KVH87637.1| Leucine-rich repeat-containing protein, partial [Cynara cardunculus
           var. scolymus]
          Length = 501

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 46/145 (31%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
 Frame = -1

Query: 424 NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
           NMD++V L L    I+V+PSS G+YCTN            KS++ N            A 
Sbjct: 95  NMDNMVELSLRGSRIKVVPSSFGKYCTNLLSLDLGYCKSLKSIEGNFHHLKHLKKFFIAR 154

Query: 244 FTQLEKNPKDLFNEKCFLEEL-LFNLKY---YSESXXXXXXXXXXXXXXXXXXLSGLKDG 77
             +L+  P+ LF+  C LE L LF   +   +                          +G
Sbjct: 155 CKKLKIPPEGLFDVTCCLEVLHLFGTSFKNLHPGIVSMKFPGFPPSLKRLHLVSCDWING 214

Query: 76  EIPCEIGELSNLQELHLCHNDFTRL 2
           +I     ELSNLQ L+L HNDF+RL
Sbjct: 215 DISSVFCELSNLQVLNLQHNDFSRL 239


>gb|KVH91077.1| Leucine-rich repeat-containing protein, partial [Cynara cardunculus
           var. scolymus]
          Length = 424

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
 Frame = -1

Query: 424 NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
           NMD++V L L+  GI+V+PSS G+YC N            +S++ N            A 
Sbjct: 97  NMDNMVELSLDRTGIKVIPSSFGKYCINLLSLSLGYCGSLESIEGNFHHLKHLKKFSIAR 156

Query: 244 FTQLEKNPKDLFNEKCFLEEL-LFNLKYYSESXXXXXXXXXXXXXXXXXXLSGLK----- 83
             +L+  P+ LF+  C LE L LF   +  ++                  + GL+     
Sbjct: 157 CKKLKIPPEGLFDVTCCLEVLNLFGTSF--KNLHPGIVSMKFLGFPPSLRMLGLRSCNWI 214

Query: 82  DGEIPCEIGELSNLQELHLCHNDFTRL 2
           +G+I   + ELSNL  L L  NDF+RL
Sbjct: 215 NGDISSVLCELSNLHVLDLQKNDFSRL 241


>gb|KVI05548.1| Leucine-rich repeat-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 417

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 42/142 (29%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
 Frame = -1

Query: 421 MDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAGF 242
           MD+LV   L   GIE++PSS+G+YC N             S++ N             G 
Sbjct: 1   MDNLVEFSLRETGIEIVPSSIGQYCKNLVSFDLRSCRYLHSIEGNFHLLKHLQWLYLKGC 60

Query: 241 TQLEKNPKD-LFNEKCFLEELLFNLKYYSESXXXXXXXXXXXXXXXXXXLSGLKDGEIPC 65
            QL+  P + LF+ +C L  L  +L                           L D +I  
Sbjct: 61  DQLKNIPTEGLFDVECCLNVLSLSLTNLQPGALNDFLGFPRFLRRLNLGGCNLVDEDISS 120

Query: 64  EI-GELSNLQELHLCHNDFTRL 2
               E SNLQ L L  NDF+RL
Sbjct: 121 IFWEEFSNLQVLDLSANDFSRL 142


>gb|KVI05554.1| Leucine-rich repeat-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 365

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 4/145 (2%)
 Frame = -1

Query: 424 NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
           +MD+LV L     GIEV+PSS+G+YC N             S++SN             G
Sbjct: 65  SMDNLVKLSFRRSGIEVVPSSIGQYCNNLVSLDLRWCRYLHSIESNFHLLKHLQFLSLKG 124

Query: 244 FTQLEKNPKD-LFNEKCFLEELLFNLKYYSESXXXXXXXXXXXXXXXXXXLSGLKDGEIP 68
             QL+  P + LF+ +C L     +                            L D +I 
Sbjct: 125 CDQLKNIPTEGLFDVECCLNVFSLSCSNLQRGAVNEFLGFPRFLRRLSLGGCNLVDEDIS 184

Query: 67  ---CEIGELSNLQELHLCHNDFTRL 2
              CE  ELSNL+ L +  N+F+RL
Sbjct: 185 TVFCE--ELSNLRVLDVSRNEFSRL 207


>gb|KVI05552.1| hypothetical protein Ccrd_016170, partial [Cynara cardunculus var.
           scolymus]
          Length = 517

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
 Frame = -1

Query: 424 NMDSLVNLHLNNVGIEVLPSSVGRYCTNXXXXXXXXXXXXKSVDSNXXXXXXXXXXXXAG 245
           NMDSL  L L    IE LPSSVGRYCT             K ++ N              
Sbjct: 95  NMDSLEKLCLRGTKIEYLPSSVGRYCTKLLSLDLSSCFHLKKIEGNLCLLKHLKELHLND 154

Query: 244 FTQLEKNPKDLFNEKCFLEELLFNLKYYS-ESXXXXXXXXXXXXXXXXXXLSGLKDGEIP 68
             QL+   + LF+ +C L  L  +L Y S  +                     L DG++ 
Sbjct: 155 CKQLKIPVEGLFDVECCLHVL--SLSYISLRNLDRKRLGFSHSLKRLSLGWCKLVDGDMS 212

Query: 67  CEIGELSNLQELHLCHNDFTRL 2
               ELSNLQ L L  NDF++L
Sbjct: 213 VVCKELSNLQVLDLSGNDFSQL 234


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