BLASTX nr result

ID: Chrysanthemum21_contig00033671 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00033671
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022038743.1| F-box/FBD/LRR-repeat protein At5g22660-like ...    58   6e-07

>ref|XP_022038743.1| F-box/FBD/LRR-repeat protein At5g22660-like [Helianthus annuus]
 gb|OTG25771.1| putative F-box domain, FBD domain, Leucine-rich repeat domain, L
           domain-like protein [Helianthus annuus]
          Length = 459

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = -3

Query: 424 EKRRLVIASFLLEHGNVLEEIVFSWLSKVQYHEXXXXXXXXXXXXXXXXSTVKLISVLRE 245
           EKR++ +A FLLEHGN LEE+VFSW  KV YHE                STVKLI++L++
Sbjct: 400 EKRKVDMARFLLEHGNELEEMVFSWRDKVNYHEKSTETMKEVSKFYKASSTVKLITLLKD 459


Top