BLASTX nr result

ID: Chrysanthemum21_contig00033572 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00033572
         (386 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG15986.1| putative ribonuclease H-like domain-containing pr...   162   8e-44
ref|XP_023773239.1| uncharacterized protein LOC111921902 isoform...   134   9e-35
ref|XP_021979889.1| uncharacterized protein LOC110876013 [Helian...   132   3e-33
ref|XP_022007751.1| uncharacterized protein LOC110907024 [Helian...   107   1e-24
ref|XP_022014950.1| uncharacterized protein LOC110914472 [Helian...   104   1e-23
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   100   4e-22
gb|OIT28339.1| transcription termination factor mterf8, chloropl...    98   2e-21
gb|PKU83464.1| Retrovirus-related Pol polyprotein from transposo...    98   3e-21
ref|XP_018814598.1| PREDICTED: uncharacterized protein LOC108986...    96   9e-21
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    96   2e-20
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...    96   2e-20
gb|OMO81232.1| Reverse transcriptase, RNA-dependent DNA polymera...    95   4e-20
ref|XP_019153679.1| PREDICTED: uncharacterized protein LOC109150...    95   5e-20
gb|OMP03555.1| hypothetical protein CCACVL1_02371 [Corchorus cap...    95   5e-20
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...    94   1e-19
gb|PKU67366.1| Retrovirus-related Pol polyprotein from transposo...    94   1e-19
gb|PKU82366.1| Retrovirus-related Pol polyprotein from transposo...    93   2e-19
gb|OMO75820.1| Integrase, catalytic core [Corchorus capsularis]        92   6e-19
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    91   9e-19
gb|PKU76715.1| Retrovirus-related Pol polyprotein from transposo...    91   1e-18

>gb|OTG15986.1| putative ribonuclease H-like domain-containing protein [Helianthus
           annuus]
          Length = 1320

 Score =  162 bits (411), Expect = 8e-44
 Identities = 74/121 (61%), Positives = 93/121 (76%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  T  TLLTGPSD GLY++R P +  + RVAFS  RAS+ TWHQRLGHPH  L  SML 
Sbjct: 459 DKSTHTTLLTGPSDGGLYTIRFPSAQPLPRVAFSTYRASTTTWHQRLGHPHSQLFSSMLS 518

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSY 5
           +F LPVS+K+   +C+SC +GKSSKLHLL S ++S+HVLDL+FCDVWGP+ + SF+G +Y
Sbjct: 519 SFHLPVSDKNFDFNCSSCLVGKSSKLHLLSSDYHSSHVLDLVFCDVWGPSGVSSFDGHNY 578

Query: 4   F 2
           F
Sbjct: 579 F 579


>ref|XP_023773239.1| uncharacterized protein LOC111921902 isoform X1 [Lactuca sativa]
          Length = 437

 Score =  134 bits (336), Expect = 9e-35
 Identities = 65/121 (53%), Positives = 83/121 (68%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  T  TLL GPS++GLYSLRLP   S  +VA SA RASS  WH+RLGHPH  L + ++ 
Sbjct: 137 DELTHTTLLMGPSEHGLYSLRLPQLRSTPQVALSATRASSTIWHRRLGHPHKCLFQFIVS 196

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSY 5
           +  LPVSN +L + C+SC +GKS K+ L  SSF S  +LDL++CDVW  AP+ S +G  Y
Sbjct: 197 SSKLPVSNNTLPSFCSSCQLGKSCKIPLPISSFRSNKILDLVYCDVWCSAPVLSSDGHRY 256

Query: 4   F 2
           F
Sbjct: 257 F 257


>ref|XP_021979889.1| uncharacterized protein LOC110876013 [Helianthus annuus]
          Length = 703

 Score =  132 bits (332), Expect = 3e-33
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  TR TLLTGPS+ GLY++RLP   S+ +VAF+AV+ SS  WH  LGHPH  +L+S++ 
Sbjct: 460 DESTRTTLLTGPSEQGLYTIRLPHLKSLPKVAFTAVKESSTIWHHHLGHPHRRVLQSIIS 519

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFN 17
           ++SLPVS K  S  C SC + KSSKL L  S+F+S+++LDL++CDVWGP+   S +
Sbjct: 520 SYSLPVSTKLSSCLCTSCQLAKSSKLPLKLSTFHSSNILDLVYCDVWGPSSTLSLD 575


>ref|XP_022007751.1| uncharacterized protein LOC110907024 [Helianthus annuus]
          Length = 553

 Score =  107 bits (268), Expect = 1e-24
 Identities = 53/102 (51%), Positives = 69/102 (67%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  TR  LLTGPSD GLY++RLP    V ++ F+  RA S  WHQRLGHPH  + + ++ 
Sbjct: 451 DEATRAILLTGPSDQGLYTIRLPSFQPVSKMVFTVFRAPSTMWHQRLGHPHFRVFQHIVK 510

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLI 59
            FSLP+S+K  S+ C SC +GK SKL L  SSF S ++LDL+
Sbjct: 511 TFSLPISDKLCSSLCTSCQLGKMSKLTLPISSFCSKNILDLV 552


>ref|XP_022014950.1| uncharacterized protein LOC110914472 [Helianthus annuus]
          Length = 591

 Score =  104 bits (260), Expect = 1e-23
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           +T TRKTLLTGPS+NGLYSL +P    +H+VAFSAVRAS DTWH+RLGHPHPDLLKSML 
Sbjct: 414 NTCTRKTLLTGPSNNGLYSLCVPSIRPLHKVAFSAVRASQDTWHRRLGHPHPDLLKSMLS 473

Query: 184 NFSLP 170
            FSLP
Sbjct: 474 LFSLP 478


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  100 bits (250), Expect = 4e-22
 Identities = 54/111 (48%), Positives = 67/111 (60%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  TRKTLL G S   LY    PL HS  + A+SA++ S D WH RLGHP    +K ++ 
Sbjct: 415 DQITRKTLLKGRSWRRLY----PLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVN 470

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAP 32
            FSLP S+ S  + CN+C   KS +L    SS  S H L+L+F DVWGPAP
Sbjct: 471 KFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAP 521


>gb|OIT28339.1| transcription termination factor mterf8, chloroplastic [Nicotiana
           attenuata]
          Length = 474

 Score = 98.2 bits (243), Expect = 2e-21
 Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
 Frame = -2

Query: 352 RKTLLTGPSDNGLYSLRLPLSHSVHR--VAFSAVRASSDTWHQRLGHPHPDLLKSMLFNF 179
           +K LL GP+D+G+Y+L + ++  + R   AF +VR ++  WH RLGHP    +  ++  F
Sbjct: 35  KKVLLKGPADDGVYTLLIAVTDDIARNSKAFKSVRTAAPDWHARLGHPKQSTVSFIVNKF 94

Query: 178 SLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSYF 2
           SLP  +   S  C +C +GK S++ L  + F ++  L+LI  DVWGPAP  SF GD YF
Sbjct: 95  SLPSHSIKSSGLCEACCLGKHSQISLHVTGFIASKPLELIHGDVWGPAPNLSFYGDKYF 153


>gb|PKU83464.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 802

 Score = 98.2 bits (243), Expect = 3e-21
 Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSML- 188
           D  T +TLL GP +NGLY +R+P S S   VA +AV+A++ TWH RLGHP+  +L  +  
Sbjct: 412 DQTTHQTLLQGPCENGLYPVRIPPSSSSD-VALAAVKATTVTWHHRLGHPNDRVLTYIAK 470

Query: 187 FNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDS 8
            N SL + N   S  C+SC   K+ KL    S    + +L LI CDVWGPAP+ S  G  
Sbjct: 471 CNPSLSIRNAQFS--CSSCQQAKAHKLVFPNSITRHSSILSLIHCDVWGPAPVPSVQGYR 528

Query: 7   YF 2
           Y+
Sbjct: 529 YY 530


>ref|XP_018814598.1| PREDICTED: uncharacterized protein LOC108986442, partial [Juglans
           regia]
          Length = 355

 Score = 95.5 bits (236), Expect = 9e-21
 Identities = 48/123 (39%), Positives = 67/123 (54%)
 Frame = -2

Query: 370 TMDTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSM 191
           T+D+ T   LL GP  NGLYS    +  +    A    R +   WH RLGHP   L+  +
Sbjct: 68  TLDSTTGTPLLRGPMRNGLYSFSNIIPSATSAQALIGERTTPSQWHSRLGHPSLQLVSRI 127

Query: 190 LFNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGD 11
           +  ++LP S+ S S SC++C   KS +L    S  +S+  L LI+ DVWGPAP+ S  G 
Sbjct: 128 ISKYNLPASSPSTSTSCSACRAAKSHQLPFKSSHQHSSRPLQLIYTDVWGPAPVLSREGF 187

Query: 10  SYF 2
            Y+
Sbjct: 188 KYY 190


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVR--ASSDTWHQRLGHPHPDLLKSM 191
           D  T+K L+ G + +GLY L+     S  +  FS  +  AS + WH+RLGHPHP +L+ +
Sbjct: 426 DKATKKLLIMGSTCDGLYCLK---DDSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQL 482

Query: 190 LFNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGD 11
           +   S+ + NK+  + C +C +GKS++L  + SSF S   L+ + CD+WGP+PI S  G 
Sbjct: 483 VKTNSISI-NKTSKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITSVQGF 541

Query: 10  SYF 2
            Y+
Sbjct: 542 RYY 544


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 45/121 (37%), Positives = 75/121 (61%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  T+K L+ G + +GLYSL  P    ++    ++  ASS+ WH+RLGH + ++L  +  
Sbjct: 420 DKATKKLLVMGRNRDGLYSLEEPKLQVLYSTRQNS--ASSEVWHRRLGHANAEVLHQLAS 477

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSY 5
           + S+ + NK +   C +CH+GKS++L  + S+FN++  L+ I CD+WGP+P  S  G  Y
Sbjct: 478 SKSIIIINKVVKTVCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRY 537

Query: 4   F 2
           +
Sbjct: 538 Y 538


>gb|OMO81232.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 1619

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 50/121 (41%), Positives = 70/121 (57%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  T+  L  G + + +Y      S  +  +AF+A+R S+  WHQRLGHP   +L  +L 
Sbjct: 375 DLQTQAVLTQGLNVDDVYQFS---SSQIKPIAFTAIRTSAQHWHQRLGHPSKLILHRVLK 431

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSY 5
            FSLP  +     SCNSCH  KS KL    SS +S+  L+L++ D+WGPAPI S +G  Y
Sbjct: 432 QFSLPQISNDFQ-SCNSCHCNKSHKLPFGVSSLSSSKPLELVYTDIWGPAPIPSVSGHKY 490

Query: 4   F 2
           +
Sbjct: 491 Y 491


>ref|XP_019153679.1| PREDICTED: uncharacterized protein LOC109150218 [Ipomoea nil]
          Length = 753

 Score = 94.7 bits (234), Expect = 5e-20
 Identities = 48/114 (42%), Positives = 68/114 (59%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  T+  LL GPS  GLYSL +P SH    +AF + R +S  WH RLGHPH  +L+  L 
Sbjct: 184 DCITKGVLLKGPSVGGLYSLTVPRSH----LAFLSARTTSAIWHCRLGHPHARVLQHALK 239

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKS 23
           +  +          C++C +GKSS+L L   ++ S  VLDL++ ++WGPAP+ S
Sbjct: 240 SCPVTSHKSGPPGLCSACQLGKSSRLPLARINYTSHAVLDLVYSNIWGPAPVIS 293


>gb|OMP03555.1| hypothetical protein CCACVL1_02371 [Corchorus capsularis]
          Length = 1372

 Score = 94.7 bits (234), Expect = 5e-20
 Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
 Frame = -2

Query: 364  DTFTRKTLLTGPSDNGLYSLRL--PLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSM 191
            D F+RK +  G S  G+Y L+   P+  +   +AF   + SS+TWHQRLGHP+   L  +
Sbjct: 908  DLFSRKIIAQGRSREGIYELQSADPIIKTPS-LAFVGTKTSSNTWHQRLGHPNSKTLNFL 966

Query: 190  LFNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGD 11
            + NFSLP SNK +++ CNSC   K  KL    S+  S+  L++I+ DVW P+ + S    
Sbjct: 967  IKNFSLPCSNKKINSLCNSCLCNKIHKLPFASSTITSSGPLEVIYSDVWSPSRVTSVKDF 1026

Query: 10   SYF 2
             Y+
Sbjct: 1027 RYY 1029


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 50/121 (41%), Positives = 70/121 (57%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D  T+K LL G +  GLYS++ P  H+        V AS + WHQRLGHP+P +L+ +  
Sbjct: 425 DKATKKVLLQGRNTKGLYSIKEPAFHAFFSTR--QVAASDEVWHQRLGHPNPHILQRLAS 482

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSY 5
             S+ ++ +S S  C SC M KSS+L    S F +T  L+ I CDVWGP+P+ S     Y
Sbjct: 483 IKSVFINKRSKSL-CVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKY 541

Query: 4   F 2
           +
Sbjct: 542 Y 542


>gb|PKU67366.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 871

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSM-L 188
           D  T++ +L GP  NGLY ++   + +    A+SA  ASS  WH RLGHP  + L S+ +
Sbjct: 289 DLMTQEVILQGPCSNGLYPVK---AATKQHNAYSATAASSIPWHDRLGHPSKNTLHSIAM 345

Query: 187 FNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDS 8
            N SL + +++   SC SCH+ KS KL    S+    H+L+L+  D+WGPAP+ S +G  
Sbjct: 346 SNSSLHIDSQN--KSCTSCHLSKSHKLSFERSTNRKKHLLELVHSDIWGPAPVISHSGFQ 403

Query: 7   YF 2
           Y+
Sbjct: 404 YY 405


>gb|PKU82366.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 1357

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 50/121 (41%), Positives = 61/121 (50%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSMLF 185
           D    +TLL GP  +GLY +R+P  +  H  AF     +   WH RLGHPH  LL S+  
Sbjct: 422 DRRDNRTLLRGPQHHGLYHIRIP--NKCHTTAFQVSHNARARWHARLGHPHSRLLSSLAT 479

Query: 184 NFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDSY 5
                  + S    C SC++ K  KL  LPSS        LI  DVWGPAPI S NG  Y
Sbjct: 480 QIPELAGSHSFLDDCVSCNVSKCHKLPFLPSSSVCNKPFQLIHSDVWGPAPIASMNGFFY 539

Query: 4   F 2
           +
Sbjct: 540 Y 540


>gb|OMO75820.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1430

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSL-RLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSML 188
           D  T++ +  G +  GLY     P       +A   V++S +TWHQRLGHP+  +L+S+L
Sbjct: 606 DLHTKEPVAHGLNRGGLYYFTNHPPVIDTQALALVGVKSSLETWHQRLGHPNSHVLQSVL 665

Query: 187 FNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDS 8
            +FSLP S+    +SCN+C+  KS +L    SS  S   LD+I+ DVWGPA I S  G  
Sbjct: 666 KSFSLPCSSFKQFSSCNACYCNKSHRLPFSSSSIVSRGPLDVIYTDVWGPAQIISTQGFK 725

Query: 7   YF 2
           Y+
Sbjct: 726 YY 727


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDN-GLYSLRLPLSHSVHRVAFSAVRASSDTWHQRLGHPHPDLLKSML 188
           D  T K L  G S + GLY L  P     +      V+A+ + WH RLGHP+P +L+ +L
Sbjct: 408 DKATCKVLTKGSSTSEGLYKLENPKFQMFYSTR--QVKATDEVWHMRLGHPNPQVLQ-LL 464

Query: 187 FNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNGDS 8
            N      NKS S  C SC +GKSS+L  + S F ++  L+ + CD+WGPAP+ S  G  
Sbjct: 465 ANKKAIQINKSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQ 524

Query: 7   YF 2
           Y+
Sbjct: 525 YY 526


>gb|PKU76715.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 1385

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 DTFTRKTLLTGPSDNGLYSLRLPLSHSV---HRVAFSAVRASSDTWHQRLGHPHPDLLKS 194
           D  +   LLTGP  NGLY LR P+ + +    ++A  +V+  S+ WH+RLGHP    L +
Sbjct: 426 DKTSNNILLTGPCINGLYPLR-PIKNKLADTSQLALISVQTVSNLWHRRLGHPSAATLAT 484

Query: 193 MLFNFSLPVSNKSLSASCNSCHMGKSSKLHLLPSSFNSTHVLDLIFCDVWGPAPIKSFNG 14
           +   F + + N S +ASCNSC MGKS +L    S  NS+   +L+  DVWGP+ I S +G
Sbjct: 485 IEKQFPI-ICNNSFTASCNSCRMGKSHRLPFQKSINNSSFPFELVHSDVWGPSHIPSNSG 543

Query: 13  DSYF 2
             Y+
Sbjct: 544 FRYY 547


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