BLASTX nr result

ID: Chrysanthemum21_contig00033484 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00033484
         (447 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023741060.1| F-box protein At5g46170-like [Lactuca sativa...    45   5e-09
gb|PLY68256.1| hypothetical protein LSAT_3X113660 [Lactuca sativa]     49   5e-08
ref|XP_023741052.1| F-box protein At1g22220-like [Lactuca sativa...    49   4e-07
ref|XP_023763335.1| F-box protein At1g78100-like [Lactuca sativa...    42   5e-06
ref|XP_023735617.1| F-box protein At1g22220-like [Lactuca sativa...    40   9e-06

>ref|XP_023741060.1| F-box protein At5g46170-like [Lactuca sativa]
 ref|XP_023741062.1| F-box protein At5g46170-like [Lactuca sativa]
 ref|XP_023741063.1| F-box protein At5g46170-like [Lactuca sativa]
 gb|PLY68265.1| hypothetical protein LSAT_3X113520 [Lactuca sativa]
          Length = 325

 Score = 45.1 bits (105), Expect(2) = 5e-09
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = -2

Query: 446 SKAELKKYNLDIPRRVSWCYVPLLELPVSGYVMKGV 339
           S +E +   ++IP  VS CY+P+L+LPVSGYVM+GV
Sbjct: 239 SASETELDRVEIPDMVSKCYIPVLKLPVSGYVMRGV 274



 Score = 43.1 bits (100), Expect(2) = 5e-09
 Identities = 25/41 (60%), Positives = 26/41 (63%)
 Frame = -1

Query: 315 DLPGENVESFMNIDLNDFEDKEEAAYCEAVMEIFKNTRAGL 193
           DL GEN     N D   FEDKEEAAY EAVMEI KN +  L
Sbjct: 283 DLQGENNGLMNNED--GFEDKEEAAYTEAVMEILKNHKGNL 321


>gb|PLY68256.1| hypothetical protein LSAT_3X113660 [Lactuca sativa]
          Length = 287

 Score = 48.5 bits (114), Expect(2) = 5e-08
 Identities = 20/41 (48%), Positives = 31/41 (75%)
 Frame = -2

Query: 446 SKAELKKYNLDIPRRVSWCYVPLLELPVSGYVMKGVTLIYL 324
           S +E+++  ++ P  V +CY+P+L+LPVSGYVMKGVT   +
Sbjct: 202 SASEIERNRIEDPDIVRYCYIPVLKLPVSGYVMKGVTFFVM 242



 Score = 36.2 bits (82), Expect(2) = 5e-08
 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = -1

Query: 333 YLFGKNDLPGENVESFMNIDLNDFEDKEEAA-YCEAVMEIFKNTR 202
           ++    D  GE  +SFMN +   FEDK+EAA Y EAV EIF+  R
Sbjct: 240 FVMEMKDHQGE-YDSFMNSEDGGFEDKDEAALYTEAVKEIFEKIR 283


>ref|XP_023741052.1| F-box protein At1g22220-like [Lactuca sativa]
 gb|PLY68263.1| hypothetical protein LSAT_3X112881 [Lactuca sativa]
          Length = 358

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 19/40 (47%), Positives = 33/40 (82%)
 Frame = -2

Query: 443 KAELKKYNLDIPRRVSWCYVPLLELPVSGYVMKGVTLIYL 324
           K+E+ +  +++P  VS C++P+L++P+SGYVMKGVTL+ +
Sbjct: 274 KSEMNR--IEVPASVSQCHIPVLDMPISGYVMKGVTLVVM 311



 Score = 33.1 bits (74), Expect(2) = 4e-07
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -1

Query: 294 ESFMNIDLNDFEDKEEAAYCEAVMEIFK 211
           +S MN +    EDKEEA Y EAVMEI +
Sbjct: 321 DSLMNSEDGGSEDKEEAVYTEAVMEILE 348


>ref|XP_023763335.1| F-box protein At1g78100-like [Lactuca sativa]
 ref|XP_023763336.1| F-box protein At1g78100-like [Lactuca sativa]
 gb|PLY85838.1| hypothetical protein LSAT_3X113880 [Lactuca sativa]
          Length = 326

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = -2

Query: 446 SKAELKKYNLDIPRRVSWCYVPLLELPVSGYVMKGV 339
           S +E     +++P  V+ CY+P+L+LPVSGYVMKG+
Sbjct: 239 STSETVFNRVEVPDIVNNCYIPVLKLPVSGYVMKGI 274



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = -1

Query: 318 NDLPGENVESFMNIDLNDFEDKEEAAYCEAVMEIFKNTRAGL*SFL 181
           N   G N +  MN +   FEDKEEAAY EA+MEI +  +  +  F+
Sbjct: 282 NGFQGGN-DFLMNSENGGFEDKEEAAYTEAMMEILEKHKGIMHRFM 326


>ref|XP_023735617.1| F-box protein At1g22220-like [Lactuca sativa]
 gb|PLY72400.1| hypothetical protein LSAT_3X112541 [Lactuca sativa]
          Length = 353

 Score = 40.4 bits (93), Expect(2) = 9e-06
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -2

Query: 446 SKAELKKYNLDIPRRVSWCYVPLLELPVSGYVMKGV 339
           S +E     +++P  +  CY+P L+LPVSGYVMKG+
Sbjct: 244 SASETVLNRINVPTILRNCYIPFLKLPVSGYVMKGI 279



 Score = 36.6 bits (83), Expect(2) = 9e-06
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = -1

Query: 339 YSYLFGKNDLPGENVESFMNIDLNDFEDKEEAAYCEAVMEIFK 211
           Y  +    D+ G N E  M+ +   FEDKEE+AY EA+MEI K
Sbjct: 280 YFCVMEMKDMEGGN-EFLMSSENGGFEDKEESAYTEAMMEILK 321


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