BLASTX nr result

ID: Chrysanthemum21_contig00033437 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00033437
         (938 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97938.1| Proteasome, alpha-subunit, N-terminal domain-cont...    58   5e-06
ref|XP_023734413.1| proteasome subunit alpha type-6 [Lactuca sat...    57   7e-06
ref|XP_022033546.1| proteasome subunit alpha type-6 [Helianthus ...    57   7e-06

>gb|KVH97938.1| Proteasome, alpha-subunit, N-terminal domain-containing protein
           [Cynara cardunculus var. scolymus]
          Length = 245

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -2

Query: 841 SQVLMQDKLLDPTSVTHLFPVTKFVGLLATGTTRSRL 731
           +Q  + DKLLDPTSVTHLFPVTKF+GLLATGTT   L
Sbjct: 52  TQKKVPDKLLDPTSVTHLFPVTKFLGLLATGTTGMHL 88


>ref|XP_023734413.1| proteasome subunit alpha type-6 [Lactuca sativa]
 gb|PLY97258.1| hypothetical protein LSAT_1X37980 [Lactuca sativa]
          Length = 246

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 841 SQVLMQDKLLDPTSVTHLFPVTKFVGLLATGTT 743
           +Q  + DKLLDPTSVTHLFPVTKF+GLLATGTT
Sbjct: 52  TQKKVPDKLLDPTSVTHLFPVTKFLGLLATGTT 84


>ref|XP_022033546.1| proteasome subunit alpha type-6 [Helianthus annuus]
 gb|OTG26935.1| putative proteasome subunit alpha type-6 [Helianthus annuus]
          Length = 246

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 841 SQVLMQDKLLDPTSVTHLFPVTKFVGLLATGTT 743
           +Q  + DKLLDPTSVTHLFPVTKF+GLLATGTT
Sbjct: 52  TQKKVPDKLLDPTSVTHLFPVTKFLGLLATGTT 84


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