BLASTX nr result

ID: Chrysanthemum21_contig00033204 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00033204
         (357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021988991.1| pentatricopeptide repeat-containing protein ...    82   1e-15
ref|XP_023738231.1| pentatricopeptide repeat-containing protein ...    80   4e-15
ref|XP_009357846.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-08
ref|XP_008381254.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-07
ref|XP_008381253.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-07
gb|KVH96664.1| Pentatricopeptide repeat-containing protein [Cyna...    56   1e-06
emb|CDP14776.1| unnamed protein product [Coffea canephora]             56   1e-06
emb|CBI21840.3| unnamed protein product, partial [Vitis vinifera]      55   3e-06
ref|XP_002273904.2| PREDICTED: pentatricopeptide repeat-containi...    55   3e-06

>ref|XP_021988991.1| pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Helianthus annuus]
 gb|OTG11662.1| putative tetratricopeptide-like helical domain-containing protein
           [Helianthus annuus]
          Length = 468

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 38/60 (63%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1   FCKYKEMEKAVDAMRKAILSYDNN-WKLNQVTLTACVKYLEEKGDMELAKKFSKFTNGRA 177
           +CKY+EMEKAV+AM+KAI   D++ W LNQVTL ACV+YLE KGDM++AK+F++ T G A
Sbjct: 393 YCKYEEMEKAVEAMKKAISCIDDDRWSLNQVTLIACVRYLENKGDMKVAKEFARLTEGLA 452


>ref|XP_023738231.1| pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Lactuca sativa]
 gb|PLY70384.1| hypothetical protein LSAT_4X65120 [Lactuca sativa]
          Length = 472

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 38/57 (66%), Positives = 47/57 (82%)
 Frame = +1

Query: 1   FCKYKEMEKAVDAMRKAILSYDNNWKLNQVTLTACVKYLEEKGDMELAKKFSKFTNG 171
           F K+ EMEKA+DAMRKAILS  ++WKLN+VTL  CVKYLEEKG+ME+AK+  K + G
Sbjct: 401 FSKHGEMEKAMDAMRKAILSNGDHWKLNEVTLRTCVKYLEEKGEMEVAKELLKSSEG 457


>ref|XP_009357846.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Pyrus x bretschneideri]
          Length = 514

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 25/48 (52%), Positives = 39/48 (81%)
 Frame = +1

Query: 16  EMEKAVDAMRKAILSYDNNWKLNQVTLTACVKYLEEKGDMELAKKFSK 159
           +M+KAV+ M+KAIL+    WK N +TL AC++YL+EKGD+E+A++ S+
Sbjct: 399 QMDKAVETMKKAILASRAGWKFNHLTLAACLEYLKEKGDVEVAQELSR 446


>ref|XP_008381254.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like isoform X2 [Malus domestica]
          Length = 420

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 25/48 (52%), Positives = 38/48 (79%)
 Frame = +1

Query: 16  EMEKAVDAMRKAILSYDNNWKLNQVTLTACVKYLEEKGDMELAKKFSK 159
           +M+KAV+ M+KAIL     WK N +TL AC++YL+EKGD+E+A++ S+
Sbjct: 305 QMDKAVETMKKAILXSRAGWKFNHLTLAACLEYLKEKGDVEVAQELSR 352


>ref|XP_008381253.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like isoform X1 [Malus domestica]
          Length = 514

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 25/48 (52%), Positives = 38/48 (79%)
 Frame = +1

Query: 16  EMEKAVDAMRKAILSYDNNWKLNQVTLTACVKYLEEKGDMELAKKFSK 159
           +M+KAV+ M+KAIL     WK N +TL AC++YL+EKGD+E+A++ S+
Sbjct: 399 QMDKAVETMKKAILXSRAGWKFNHLTLAACLEYLKEKGDVEVAQELSR 446


>gb|KVH96664.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 459

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   FCKYKEMEKAVDAMRKAILSYDNNW-KLNQVTLTACVKYLEEKGDMELA 144
           FCK+ +MEK VDAMRKAILS+ ++  KLNQVTLTAC+K  E + +   A
Sbjct: 402 FCKHGQMEKGVDAMRKAILSHHHDHSKLNQVTLTACLKTAEAEAEQHQA 450


>emb|CDP14776.1| unnamed protein product [Coffea canephora]
          Length = 491

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +1

Query: 1   FCKYKEMEKAVDAMRKAILSYDN-NWKLNQVTLTACVKYLEEKGDMELAK 147
           + K  +MEKAVDAM+ AI S+   +W LN+ TLT+C++YL+EKGD E  K
Sbjct: 395 YYKDNQMEKAVDAMKNAIFSWKGTSWTLNRTTLTSCLEYLKEKGDAEKEK 444


>emb|CBI21840.3| unnamed protein product, partial [Vitis vinifera]
          Length = 446

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +1

Query: 16  EMEKAVDAMRKAILSYDNNWKLNQVTLTACVKYLEEKGDMELAK 147
           +MEKAVD ++KA+L+    WK N VTL+AC++YL+ KGD+E A+
Sbjct: 343 QMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKGDVEEAE 386


>ref|XP_002273904.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
          Length = 968

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +1

Query: 16  EMEKAVDAMRKAILSYDNNWKLNQVTLTACVKYLEEKGDMELAK 147
           +MEKAVD ++KA+L+    WK N VTL+AC++YL+ KGD+E A+
Sbjct: 865 QMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKGKGDVEEAE 908


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