BLASTX nr result

ID: Chrysanthemum21_contig00032879 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032879
         (702 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05037.1| hypothetical protein Ccrd_016631 [Cynara carduncu...    69   7e-10

>gb|KVI05037.1| hypothetical protein Ccrd_016631 [Cynara cardunculus var. scolymus]
          Length = 408

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 49/108 (45%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
 Frame = +1

Query: 1   NRTNGIKWFHYGYARRTAEPGSKTWVSYGPQPYPLKTGDMIEVSFISRGSLKVEKCGIHL 180
           N+TN  +W +     RT E  S  WVS GPQPYP++ GD IEV       LKVEKCGIHL
Sbjct: 302 NKTNDTEWTYEANFFRTFEVNS--WVSNGPQPYPIRCGDKIEVYAGGDEDLKVEKCGIHL 359

Query: 181 AYKPIIEA---TEQSSLC--IKEIDGHFSALETSCK----EEVSKRSK 297
           AYK   ++   TE   L   I +  GH  A++TS K     ++SKR K
Sbjct: 360 AYKQHSQSMMETESKILVDFIPQKRGHV-AVQTSNKSSNENKLSKRLK 406


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