BLASTX nr result

ID: Chrysanthemum21_contig00032794 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032794
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010418239.1| PREDICTED: leucine-rich repeat extensin-like...    62   1e-07

>ref|XP_010418239.1| PREDICTED: leucine-rich repeat extensin-like protein 2 [Camelina
           sativa]
          Length = 722

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
 Frame = +3

Query: 9   PIVKNPTQPSFLIPPTAN---PHPLHFPSLFHSPHEP*LLFFP*NQNTPPPKIPFTQVHQ 179
           P+ ++P  P    PP      P P+++P + HSP  P + + P  Q+ PPP + +  V Q
Sbjct: 584 PVTQSPPPPPVYYPPVTQSPPPPPVYYPPVTHSPPPPPVYYPPVTQSPPPPPVYYPPVTQ 643

Query: 180 NLNPP*PFY-----PVHNQNPKTHFTPSPNPTKSQPQEQITGYHCHHGNPCQKAP 329
           + +PP P Y     P H+  P  + +P P      P         HH  P Q +P
Sbjct: 644 SPSPPPPVYYPPASPNHSPPPPEYQSPPPKGCNDSPSND-----HHHQTPTQPSP 693


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