BLASTX nr result

ID: Chrysanthemum21_contig00032758 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032758
         (765 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93848.1| hypothetical protein Ccrd_004104 [Cynara carduncu...    60   2e-13
ref|XP_023749690.1| phospholipase SGR2-like isoform X1 [Lactuca ...    57   2e-12
ref|XP_023749691.1| phospholipase SGR2-like isoform X2 [Lactuca ...    57   4e-12

>gb|KVH93848.1| hypothetical protein Ccrd_004104 [Cynara cardunculus var. scolymus]
          Length = 887

 Score = 59.7 bits (143), Expect(2) = 2e-13
 Identities = 27/59 (45%), Positives = 42/59 (71%)
 Frame = -1

Query: 483 VDNALFILKHLYRNI*DEPDTQDDYMDYEINQISGDLKW*YNGKEVTEEELPSTLNNTK 307
           +D ALFILKHLY++I +EP+  D+ M+ E NQ + D +  Y+ +E  EE+LP T +N++
Sbjct: 813 MDTALFILKHLYQDIPEEPEIPDELMENETNQPTQDFQGWYDNEEAVEEDLPLTFSNSR 871



 Score = 44.7 bits (104), Expect(2) = 2e-13
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = -2

Query: 608 SRHTSEKPQVVERSYWSLMLEKLTKSEYGWIAQIL 504
           S  TSEKP +VERSY S+MLEKLT SE G I  +L
Sbjct: 756 SAETSEKPAIVERSYGSIMLEKLTGSEDGRIDHVL 790


>ref|XP_023749690.1| phospholipase SGR2-like isoform X1 [Lactuca sativa]
          Length = 888

 Score = 56.6 bits (135), Expect(3) = 2e-12
 Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -1

Query: 483 VDNALFILKHLYRNI*DEPDTQDDYMDYEINQISGDL--KW*YNGKEVTEEELPSTLNNT 310
           +D ALFILKHLYRNI +EP+  D     E+ Q +G+    W  N +E T+++LP T +NT
Sbjct: 813 LDTALFILKHLYRNIPEEPEAPDGDTKNEVKQGTGEYWHGWYNNNEEGTDDDLPLTFSNT 872

Query: 309 K 307
           K
Sbjct: 873 K 873



 Score = 40.4 bits (93), Expect(3) = 2e-12
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -2

Query: 608 SRHTSEKPQVVERSYWSLMLEKLTKSEYGWIAQIL 504
           S  + E+P+VVERSY S+M+EKLT SE G I  +L
Sbjct: 756 SMESPEEPEVVERSYGSIMMEKLTGSEDGRIDHVL 790



 Score = 23.5 bits (49), Expect(3) = 2e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 298 KVTRSAKSFIGP 263
           K TR AKSFIGP
Sbjct: 877 KFTRRAKSFIGP 888


>ref|XP_023749691.1| phospholipase SGR2-like isoform X2 [Lactuca sativa]
          Length = 885

 Score = 56.6 bits (135), Expect(3) = 4e-12
 Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
 Frame = -1

Query: 483 VDNALFILKHLYRNI*DEPDTQDDYMDYEINQISGDL--KW*YNGKEVTEEELPSTLNNT 310
           +D ALFILKHLYRNI +EP+  D     E+ Q +G+    W  N +E T+++LP T +NT
Sbjct: 810 LDTALFILKHLYRNIPEEPEAPDGDTKNEVKQGTGEYWHGWYNNNEEGTDDDLPLTFSNT 869

Query: 309 K 307
           K
Sbjct: 870 K 870



 Score = 39.3 bits (90), Expect(3) = 4e-12
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -2

Query: 593 EKPQVVERSYWSLMLEKLTKSEYGWIAQIL 504
           E+P+VVERSY S+M+EKLT SE G I  +L
Sbjct: 758 EEPEVVERSYGSIMMEKLTGSEDGRIDHVL 787



 Score = 23.5 bits (49), Expect(3) = 4e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 298 KVTRSAKSFIGP 263
           K TR AKSFIGP
Sbjct: 874 KFTRRAKSFIGP 885


Top