BLASTX nr result

ID: Chrysanthemum21_contig00032738 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032738
         (570 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04154.1| GYF-like protein [Cynara cardunculus var. scolymus]    173   2e-46
gb|OTF86607.1| putative SWIB/MDM2 domain, GYF domain, Plus-3 dom...   139   2e-34
ref|XP_022021422.1| zinc finger CCCH domain-containing protein 1...   139   2e-34
gb|KVH95982.1| GYF-like protein [Cynara cardunculus var. scolymus]    120   3e-28
gb|PLY91900.1| hypothetical protein LSAT_8X128721 [Lactuca sativa]     87   2e-16
ref|XP_023755230.1| zinc finger CCCH domain-containing protein 1...    87   2e-16

>gb|KVI04154.1| GYF-like protein [Cynara cardunculus var. scolymus]
          Length = 1674

 Score =  173 bits (438), Expect = 2e-46
 Identities = 102/186 (54%), Positives = 117/186 (62%), Gaps = 16/186 (8%)
 Frame = -3

Query: 568  KGTTGWTGGQAGSQTG-PSGNEGLLSPTPNSAHVVGASVLPLVPGGNKEANSLGSGGFST 392
            K TTGW GGQ+G  +  PSGNEGL SPTPNS  +  +++  LV   N + N++GS G S 
Sbjct: 1262 KSTTGWIGGQSGPHSSYPSGNEGLQSPTPNSVRLASSNISSLVACVN-DTNAVGSVGSS- 1319

Query: 391  FQPHDLSNPVSLAVAPQNIEQGI----QNSVQSSQV-----PPPNNSMTPQMVQSVSGQN 239
                     VS    PQN+EQG     QNS+QSSQ+     PPP+N+M PQMVQSV GQN
Sbjct: 1320 -------GTVSFPAVPQNMEQGTVLGSQNSIQSSQLGQPVAPPPDNNMVPQMVQSVGGQN 1372

Query: 238  PQGWSGGPPQNLQPNLVMNMAGLQQLAYNQWGGVPNMVQNPNLAGNIM------PQEQWG 77
             QGW      NLQPN  MNMAGLQQLAYNQW GVPNMVQNP   GN +      PQE WG
Sbjct: 1373 SQGW------NLQPNPSMNMAGLQQLAYNQWTGVPNMVQNP--VGNFLPQSVAVPQESWG 1424

Query: 76   QFPFPV 59
            Q  FPV
Sbjct: 1425 QLQFPV 1430


>gb|OTF86607.1| putative SWIB/MDM2 domain, GYF domain, Plus-3 domain, Zinc finger,
            RING/FYVE/PHD-type [Helianthus annuus]
          Length = 1603

 Score =  139 bits (349), Expect = 2e-34
 Identities = 97/196 (49%), Positives = 116/196 (59%), Gaps = 26/196 (13%)
 Frame = -3

Query: 568  KGTTGWTGGQAGSQTGPSGNEGLLSPTPNSAHV----------VGASVLPLVPGGNKEAN 419
            +G +   G +A +  G + N  L SPTPN   +           G S  PL+   NK+ N
Sbjct: 1183 EGKSTVVGPRAINLDGQNLNRNLPSPTPNKVSIGQTAEQTGPLTGPSP-PLIACANKDGN 1241

Query: 418  SLG--SGGFS--TFQPHDLS---NPVSLAVAPQNIEQGIQN--SVQSSQ----VPPPNNS 278
              G  +G  +  TFQ HD S   + V++  APQNI QG+QN  SV SSQ    V P +++
Sbjct: 1242 LAGLQTGPLTGPTFQSHDHSTNTSGVAVPDAPQNIVQGVQNPVSVHSSQLGQLVTPLDSN 1301

Query: 277  MTPQMVQSVSGQNPQGWSGGPPQNLQPNLVMNMAGLQQLAYNQWGGVPNMVQNPNLAGNI 98
            M PQMVQSVSGQNPQGWS    QN+QPN  MNMAGL  + YNQW GVPNMVQNP   GN 
Sbjct: 1302 MQPQMVQSVSGQNPQGWS----QNMQPNPSMNMAGLPPVMYNQWTGVPNMVQNP--VGNF 1355

Query: 97   M--PQEQWG-QFPFPV 59
            M  PQE W  QFPFPV
Sbjct: 1356 MPAPQEPWAQQFPFPV 1371


>ref|XP_022021422.1| zinc finger CCCH domain-containing protein 19-like [Helianthus
            annuus]
          Length = 1609

 Score =  139 bits (349), Expect = 2e-34
 Identities = 97/196 (49%), Positives = 116/196 (59%), Gaps = 26/196 (13%)
 Frame = -3

Query: 568  KGTTGWTGGQAGSQTGPSGNEGLLSPTPNSAHV----------VGASVLPLVPGGNKEAN 419
            +G +   G +A +  G + N  L SPTPN   +           G S  PL+   NK+ N
Sbjct: 1189 EGKSTVVGPRAINLDGQNLNRNLPSPTPNKVSIGQTAEQTGPLTGPSP-PLIACANKDGN 1247

Query: 418  SLG--SGGFS--TFQPHDLS---NPVSLAVAPQNIEQGIQN--SVQSSQ----VPPPNNS 278
              G  +G  +  TFQ HD S   + V++  APQNI QG+QN  SV SSQ    V P +++
Sbjct: 1248 LAGLQTGPLTGPTFQSHDHSTNTSGVAVPDAPQNIVQGVQNPVSVHSSQLGQLVTPLDSN 1307

Query: 277  MTPQMVQSVSGQNPQGWSGGPPQNLQPNLVMNMAGLQQLAYNQWGGVPNMVQNPNLAGNI 98
            M PQMVQSVSGQNPQGWS    QN+QPN  MNMAGL  + YNQW GVPNMVQNP   GN 
Sbjct: 1308 MQPQMVQSVSGQNPQGWS----QNMQPNPSMNMAGLPPVMYNQWTGVPNMVQNP--VGNF 1361

Query: 97   M--PQEQWG-QFPFPV 59
            M  PQE W  QFPFPV
Sbjct: 1362 MPAPQEPWAQQFPFPV 1377


>gb|KVH95982.1| GYF-like protein [Cynara cardunculus var. scolymus]
          Length = 1518

 Score =  120 bits (302), Expect = 3e-28
 Identities = 79/163 (48%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
 Frame = -3

Query: 547  GGQAGSQTGPS----GNEGLLSPTPNSAHVVGASVLPLVPGGNKEANSLGS-GGFSTFQP 383
            G Q G   GPS    G E L SPTPNS+ +  +     V GGNKE N++GS G  STF  
Sbjct: 1174 GPQVGPHIGPSSYHSGKEELQSPTPNSSQLATS----FVAGGNKELNAMGSFGNSSTFV- 1228

Query: 382  HDLSNPVSLAVAPQNIE-QGIQNSVQSSQVPPPNNSMTPQMVQSVSGQN----PQGWSGG 218
                    +A APQ  +   +Q+S     V PP N+M  QMVQ  +GQN    P GWSGG
Sbjct: 1229 --------VAAAPQTEQLHSLQSSQSGHVVAPPANNMPSQMVQPAAGQNLPVGPYGWSGG 1280

Query: 217  PPQNLQPNLVMNMAGLQQLAYNQWGGVPNMVQNPNLAGNIMPQ 89
            PPQ   P+L  N+A  QQLAYNQWG  PNMVQN   AGN +PQ
Sbjct: 1281 PPQ---PSLSSNLAVQQQLAYNQWGNAPNMVQNS--AGNFLPQ 1318


>gb|PLY91900.1| hypothetical protein LSAT_8X128721 [Lactuca sativa]
          Length = 1499

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 62/160 (38%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
 Frame = -3

Query: 496  SPTPNSAHVVGASVL--PLVPGGNKEANSLGSGGFSTFQPHDLSNPVSLAVAPQNIEQGI 323
            SPTP      G++ +  P VP GN + N+ G+             PV + VAP+NI    
Sbjct: 1137 SPTPTPTPNTGSTSVGPPFVPCGNNDMNAAGTS----------VAPVPVPVAPENIVAAP 1186

Query: 322  QNSVQSSQVPPPNNSMTPQMVQSVSGQ------NPQGWSGGPPQNLQPNLVMNMAGLQQL 161
              SV          ++ PQMVQ+ SGQ      NPQGW+GG PQ +     M   G+Q +
Sbjct: 1187 GGSV----------ALPPQMVQAASGQSQSQIQNPQGWNGGGPQVIP----MAGMGMQPM 1232

Query: 160  AYNQWGGVPNMVQNPNLAGNIMPQEQWG------QFPFPV 59
             YNQW G P MVQ+P  AGN +PQ          QFPFPV
Sbjct: 1233 VYNQWSGGPAMVQDP--AGNFLPQPMAAVAAPPQQFPFPV 1270


>ref|XP_023755230.1| zinc finger CCCH domain-containing protein 19-like [Lactuca sativa]
          Length = 1512

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 62/160 (38%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
 Frame = -3

Query: 496  SPTPNSAHVVGASVL--PLVPGGNKEANSLGSGGFSTFQPHDLSNPVSLAVAPQNIEQGI 323
            SPTP      G++ +  P VP GN + N+ G+             PV + VAP+NI    
Sbjct: 1150 SPTPTPTPNTGSTSVGPPFVPCGNNDMNAAGTS----------VAPVPVPVAPENIVAAP 1199

Query: 322  QNSVQSSQVPPPNNSMTPQMVQSVSGQ------NPQGWSGGPPQNLQPNLVMNMAGLQQL 161
              SV          ++ PQMVQ+ SGQ      NPQGW+GG PQ +     M   G+Q +
Sbjct: 1200 GGSV----------ALPPQMVQAASGQSQSQIQNPQGWNGGGPQVIP----MAGMGMQPM 1245

Query: 160  AYNQWGGVPNMVQNPNLAGNIMPQEQWG------QFPFPV 59
             YNQW G P MVQ+P  AGN +PQ          QFPFPV
Sbjct: 1246 VYNQWSGGPAMVQDP--AGNFLPQPMAAVAAPPQQFPFPV 1283


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