BLASTX nr result

ID: Chrysanthemum21_contig00032731 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032731
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH77846.1| Nucleotide-binding, alpha-beta plait [Cynara card...    98   3e-21

>gb|KVH77846.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 1001

 Score = 98.2 bits (243), Expect = 3e-21
 Identities = 59/127 (46%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
 Frame = +1

Query: 1   EVEEIEETISVQESNVSKSPSKNNDALAVEDVGNGDIKGALETVAVNESGEAVTALISCE 180
           E E+I + IS QESN+SKS  KN+ AL ++D GNGD K   E  +  ES +AV+    CE
Sbjct: 214 EGEKIAKLISSQESNISKSSCKNDAALVMDDGGNGDGKCTAEMFSTQESVQAVSTKAPCE 273

Query: 181 NETPLAVQXXXXXXXXXXXXXXXXIAGDNVDNKGDEDAS-----PIDNKIEQNIEIYVGN 345
           N T L V+                  GD+ DN+GDE+ S     P+DNK E+NIEIYVG 
Sbjct: 274 NNTALIVEDDSKGNGDDEESDDDS-EGDDTDNEGDENPSISVQDPLDNKKEKNIEIYVGK 332

Query: 346 LDKDTVE 366
           L+KDTVE
Sbjct: 333 LNKDTVE 339


Top