BLASTX nr result

ID: Chrysanthemum21_contig00032306 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032306
         (366 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04058.1| hypothetical protein Ccrd_017637 [Cynara carduncu...    64   2e-09
ref|XP_023747263.1| RNA-binding protein 39-like [Lactuca sativa]       62   2e-08
gb|PLY63602.1| hypothetical protein LSAT_8X123101 [Lactuca sativa]     62   2e-08
ref|XP_021998285.1| RNA-binding protein 39-like [Helianthus annu...    57   9e-07

>gb|KVI04058.1| hypothetical protein Ccrd_017637 [Cynara cardunculus var. scolymus]
          Length = 593

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -2

Query: 365 RSEKSHDERSSKRAKSGEESRDRDTERGSSRHRSSPK 255
           RSEK++DER SKRAKSGEESRDR+ ERGSS HRSSP+
Sbjct: 46  RSEKNNDERRSKRAKSGEESRDRERERGSSHHRSSPR 82


>ref|XP_023747263.1| RNA-binding protein 39-like [Lactuca sativa]
          Length = 659

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 365 RSEKSHDERSSKRAKSGEESRDRDTERGSSRHRSSPK 255
           RSEKS D+R SKRAKSGE+SR+R+ ERGSS HRSSPK
Sbjct: 99  RSEKSSDDRRSKRAKSGEDSREREKERGSSHHRSSPK 135


>gb|PLY63602.1| hypothetical protein LSAT_8X123101 [Lactuca sativa]
          Length = 1138

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -2

Query: 365 RSEKSHDERSSKRAKSGEESRDRDTERGSSRHRSSPK 255
           RSEKS D+R SKRAKSGE+SR+R+ ERGSS HRSSPK
Sbjct: 99  RSEKSSDDRRSKRAKSGEDSREREKERGSSHHRSSPK 135


>ref|XP_021998285.1| RNA-binding protein 39-like [Helianthus annuus]
 ref|XP_021998286.1| RNA-binding protein 39-like [Helianthus annuus]
 gb|OTG05537.1| putative splicing factor, CC1-like protein [Helianthus annuus]
          Length = 570

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -2

Query: 365 RSEKSHDERSSKRAKSGEESRDRDTERGSSRHRSSPK 255
           RS+K+ D+R SKR++S EE RDR+ ERGSSRHRSSPK
Sbjct: 44  RSDKNSDDRRSKRSRSDEELRDREKERGSSRHRSSPK 80


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