BLASTX nr result

ID: Chrysanthemum21_contig00032247 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032247
         (910 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU97063.1| NB-LRR resistance-like protein RGC4, partial [Ger...    59   9e-07

>gb|AFU97063.1| NB-LRR resistance-like protein RGC4, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/55 (54%), Positives = 35/55 (63%)
 Frame = +3

Query: 744 GSGKTTIVKAVYDRIAIDFDVSCFIQDINSYVYRGPNWKVDLQKDVISCLTGDDK 908
           G GKTTIVK +Y+ I   F+  CF+ DI  Y  R PNWK  LQK +ISCL   DK
Sbjct: 2   GVGKTTIVKVMYNAIVSKFEAHCFLADIQDYRGR-PNWKFALQKRLISCLAQYDK 55


Top