BLASTX nr result

ID: Chrysanthemum21_contig00032210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032210
         (367 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06547.1| hypothetical protein Ccrd_015107 [Cynara carduncu...    75   2e-13

>gb|KVI06547.1| hypothetical protein Ccrd_015107 [Cynara cardunculus var. scolymus]
          Length = 1443

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 54/132 (40%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
 Frame = -3

Query: 359 SQPSKVSSTPAASSTNDEAASQPKKETEMQKSLSDDINSNTCQADIXXXXXXXXXXXXXX 180
           S P K SS+PAAS+TN EAASQPK+ET  QKS    + +N                    
Sbjct: 242 SHPFKASSSPAASATNVEAASQPKEETVKQKS---SVTNNVLPG---------------- 282

Query: 179 ATNDEPPSLPKKETKK-----------QKSLSDDTF--TFQANVGSVPLKVSSPPAASTT 39
             N      P+KET +            +SLSDD +  T Q N+ S P K SS P+AS T
Sbjct: 283 -VNSSNGDFPEKETSRSAVGYRSKYCQDESLSDDRYSKTVQTNLKSHPSKASSSPSASAT 341

Query: 38  NHEAASQPKKET 3
           + EAA QPK+ET
Sbjct: 342 DDEAAFQPKEET 353



 Score = 74.3 bits (181), Expect = 6e-13
 Identities = 53/132 (40%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
 Frame = -3

Query: 359 SQPSKVSSTPAASSTNDEAASQPKKETEMQKSLSDDINSNTCQADIXXXXXXXXXXXXXX 180
           S PSK SS+P+AS+T+DEAA QPK+ET  QKS    + +N                    
Sbjct: 327 SHPSKASSSPSASATDDEAAFQPKEETVKQKS---SLTNNVLPG---------------- 367

Query: 179 ATNDEPPSLPKKETKK-----------QKSLSDD--TFTFQANVGSVPLKVSSPPAASTT 39
             N      P+KET +            +SLSDD  + T Q N+ S P K SS P+AS T
Sbjct: 368 -VNSSKGDFPEKETSRSAVGSRSKYCQDESLSDDRNSKTVQTNLKSHPSKASSSPSASAT 426

Query: 38  NHEAASQPKKET 3
           + EAA QPK+ET
Sbjct: 427 DDEAAFQPKEET 438



 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
 Frame = -3

Query: 359 SQPSKVSSTPAASSTNDEAASQPKKETEMQK-SLSDDI--NSNTCQADIXXXXXXXXXXX 189
           S PSK SS+P+AS+T+DEAA QPK+ET  QK S+++D+  + NT + D            
Sbjct: 412 SHPSKASSSPSASATDDEAAFQPKEETVKQKSSVTNDVLPSVNTSKGDFPEKETSGSAVE 471

Query: 188 XXXATNDEPPSLPKKETKKQKSLSDD--TFTFQANVGSVPLKVSSPPAASTT--NHE 30
                        + ++ + +SLS+D  + TFQA++   P KVSS PAAS T  NH+
Sbjct: 472 C------------RSKSHEVESLSNDGISKTFQADIKLHPSKVSSSPAASATDVNHK 516



 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
 Frame = -3

Query: 350 SKVSSTPAASSTNDEAASQPKKETEMQKSLSDD---INSNTCQADIXXXXXXXXXXXXXX 180
           +++ + P  +   DEAASQPKKETE QKS   +   ++ N+ + D               
Sbjct: 160 TQLHAVPGFTFFIDEAASQPKKETEKQKSSVTNNIHLSVNSSKGDFLEKETSRSAVGS-- 217

Query: 179 ATNDEPPSLPKKETKKQKSLSDDTF--TFQANVGSVPLKVSSPPAASTTNHEAASQPKKE 6
                     + +  + +SLSDD    T Q +  S P K SS PAAS TN EAASQPK+E
Sbjct: 218 ----------RSKYGQDESLSDDRKFKTAQTDFKSHPFKASSSPAASATNVEAASQPKEE 267

Query: 5   T 3
           T
Sbjct: 268 T 268


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