BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00032187
         (1538 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   758   0.0  
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     550   e-180
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   560   e-179
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     544   e-178
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   542   e-177
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   560   e-177
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   555   e-175
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     535   e-175
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   535   e-174
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   521   e-172
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   531   e-170
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                 513   e-167
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   513   e-166
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   518   e-163
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   499   e-160
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]    497   e-160
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   495   e-160
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   500   e-158
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              486   e-155
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo...   483   e-155

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  758 bits (1958), Expect = 0.0
 Identities = 377/513 (73%), Positives = 416/513 (81%), Gaps = 1/513 (0%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            EVLG+F+KWKK METQT RKIKH RTDNGGEY +D F K CE+ GIVRHFTV+HTPQQNG
Sbjct: 308  EVLGIFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFTVKHTPQQNG 367

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRTLLEKVRCMLSNAGLGK+FWAEAV YA HL+NRLPS+AI GKTP EKW+GKPA
Sbjct: 368  VAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPA 427

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
            TDYDSLHVFG  AYYHVKESKLDPRAKKA+FMGI SG+KGYRLWC ETKKTI SRDVTF+
Sbjct: 428  TDYDSLHVFGCTAYYHVKESKLDPRAKKAIFMGIASGVKGYRLWCLETKKTIISRDVTFD 487

Query: 541  ESTMLKKVNAKQL-DGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXXXX 717
            ESTML KV  +Q  +GTPK+VEFER IV    +  ++                       
Sbjct: 488  ESTMLGKVTTEQKKNGTPKQVEFERKIVFPAND--EEKTPMVDEESDEEEVHIQEPPQQL 545

Query: 718  XSIATSKPKRNTKRPARLNDTVACASSIAADDVPTTYSEAVRDSESKKWRIAMSEEMQSL 897
             SIA  KPKR T  PAR  D V+ AS +A+DD+PTTY EAV+ SE  KWR AMSEEM+SL
Sbjct: 546  ESIALRKPKRTTIMPARYVDMVSYASPVASDDIPTTYIEAVKGSEEDKWRSAMSEEMESL 605

Query: 898  EKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEGIDYNEVFS 1077
             +NQTW+L NLPKGKKAIGCKWVYAKK+GF  + +VRYKARLVAKGYAQKEGIDYNEVFS
Sbjct: 606  RRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEVFS 665

Query: 1078 PVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAGKEHEVCKL 1257
            PVVKHSSIR+              MDVKTAFLHGDLEEEIYM QPEGFKVAGKE+  CKL
Sbjct: 666  PVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFCKL 725

Query: 1258 HKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLYVDDMLIAS 1437
             KSLYGLKQSPRQWYKRFDKFM++ KYTRSKYDHCVYL+KL DGSF+YLLLYVDDMLIAS
Sbjct: 726  EKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIAS 785

Query: 1438 QSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            ++ +EIEKLKT+L  EFEMKDLGEAK ILGMEI
Sbjct: 786  KNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEI 818


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  550 bits (1416), Expect = e-180
 Identities = 287/522 (54%), Positives = 343/522 (65%), Gaps = 10/522 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +   VF +WK M+E QT RK+K LRTDNG E  +  F  +C+ EGIVRH+TV HTPQQNG
Sbjct: 444  QAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNG 503

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRT++ K RCMLSNA L K+FWAEAV+ AC+L+NR PS AID KTP E W G PA
Sbjct: 504  VAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA 563

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             +Y  L VFG  AY HV   KL+PR  K +F+G  SG+KGY+LWCPETKK + SR+V F+
Sbjct: 564  -NYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFH 622

Query: 541  ESTMLK---KVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXX 711
            ES ML      N          V+ E  I        +D                     
Sbjct: 623  ESIMLHDKPSTNVPVESQEKVSVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVQQS 682

Query: 712  XXXSIATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSEAVRDSESKKWRI 870
               SIA  +PKRNTK P R  +        ++ A  I  +  P+TYS+A+   +  +W  
Sbjct: 683  PKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWIT 742

Query: 871  AMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKE 1050
            AM +EM+SLEKN +WEL  LPK KK I CKW++ +KEG    D+ RYKARLVAKGY+Q  
Sbjct: 743  AMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIP 802

Query: 1051 GIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVA 1230
            GID+N+VFSPVVKHSSIR               MDVKTAFLHG+LEE+IYM QPEGF V 
Sbjct: 803  GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVP 862

Query: 1231 GKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLL 1410
            GKE+ VC+L KSLYGLKQSPRQWYKRFD FM+  K+ RS YD CVYL K+ DGS +YLLL
Sbjct: 863  GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLL 921

Query: 1411 YVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            YVDDMLIA++   EI KLK +L SEFEMKDLG AK ILGMEI
Sbjct: 922  YVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEI 963


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  560 bits (1442), Expect = e-179
 Identities = 304/533 (57%), Positives = 362/533 (67%), Gaps = 21/533 (3%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            EVL  F ++K ++E QT +KIK  RTDNG E+ + +F +FC++EGIVRH TVR TPQQNG
Sbjct: 1042 EVLINFKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNG 1101

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRTLLE+ RCM SNAGLG+EFWAEAV  AC+LVNR PSTAI+ KTP E W G PA
Sbjct: 1102 VAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPA 1161

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPE--TKKTIFSRDVT 534
             DY  L VFG  AY HV E KL PRAKK +F+G   G+KGYRLWCP+  + K I SRDVT
Sbjct: 1162 -DYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVT 1220

Query: 535  FNESTMLKKV-NAKQLD--------GTPKKVEF--------ERTIVPDDRETVDDSXXXX 663
            F+ES+ML+   N+++ +        G  K+VE         E T V DD+  V DS    
Sbjct: 1221 FDESSMLRSTTNSREKEESDRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDE 1280

Query: 664  XXXXXXXXXXXXXXXXXXXSIATSKPKRNTKRPARLNDTVACASSIAADD--VPTTYSEA 837
                               SIAT + KR  K   R  + V+ A S+A      P++Y+EA
Sbjct: 1281 SPQEKPY------------SIATGRTKRQIKPNPRYANLVSFALSVAESIGIEPSSYNEA 1328

Query: 838  VRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKA 1017
            V   ES +W IAMSEE++SL KN TWEL   P  +K +GCKWV+ KKEG    +  R+KA
Sbjct: 1329 VTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKA 1388

Query: 1018 RLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEI 1197
            RLVAKG+ QKEGIDYNEVFSPVVKHSSIR+              +DVKTAFLHG+LEE I
Sbjct: 1389 RLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETI 1448

Query: 1198 YMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKK 1377
            YM QPEGF V GKE  VC L KSLYGLKQSPRQWYKRFD FM++  YTR  YD CVY +K
Sbjct: 1449 YMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRK 1508

Query: 1378 LQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            L DGS +YLLLYVDDMLIAS+++ EI KLK++L  EFEMKDLG AK ILGM+I
Sbjct: 1509 LSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDI 1561


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  544 bits (1401), Expect = e-178
 Identities = 284/517 (54%), Positives = 339/517 (65%), Gaps = 10/517 (1%)
 Frame = +1

Query: 16   FIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNGVAERM 195
            F +WK M+E QT RK+K LRTDNG E+ +  F  +C+ EGIV H+T  HTPQQN VAERM
Sbjct: 512  FKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVCHYTAPHTPQQNDVAERM 571

Query: 196  NRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPATDYDS 375
            NRT++ K RCMLSNAGL K+FWAEAV+ AC+L+NR P  AID KTP E W G P T+Y  
Sbjct: 572  NRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSP-TNYSD 630

Query: 376  LHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFNESTML 555
            L VFG  AY HV   KL+PRA K +F+G  SG+KGY+LWCPETKK + SR+V F+ES +L
Sbjct: 631  LRVFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVIL 690

Query: 556  K---KVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXXXXXSI 726
                  N          V+ E  I        +D                        SI
Sbjct: 691  HDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKRSI 750

Query: 727  ATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSEAVRDSESKKWRIAMSEE 885
            A  KPKRN K P R  +        ++ A  I  +  P+TYSEA+   +  +W  AM +E
Sbjct: 751  AKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDE 810

Query: 886  MQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEGIDYN 1065
            M+SLEKN TWEL  LPK KK I CKW++ +KEG    D+ RYKARLVAKGY+Q  GID+N
Sbjct: 811  MESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFN 870

Query: 1066 EVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAGKEHE 1245
            +VFSPVVKHSSIR               M+VKTAFLHG+LEE+IYM QPEGF V GKE+ 
Sbjct: 871  DVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENL 930

Query: 1246 VCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLYVDDM 1425
            VC+L KSLYGLKQSPRQWYKRFD FM+  K+  S YD CVYL K+ DGS +YLLLYVDDM
Sbjct: 931  VCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL-KVVDGSVIYLLLYVDDM 989

Query: 1426 LIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            LIA++   EIEKLK +L SEFEMKDLG AK ILGMEI
Sbjct: 990  LIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEI 1026


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  542 bits (1396), Expect = e-177
 Identities = 278/522 (53%), Positives = 350/522 (67%), Gaps = 10/522 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            E    F +WK +ME QT +KIK LRTDNG E+   +F +FC+DEGI RH TVR+TPQQNG
Sbjct: 513  EAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNG 572

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMN+TLLE+ RCMLSNAGL + FWAEAV+ AC+L+NR P T I  KTP E W GK A
Sbjct: 573  VAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGK-A 631

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             DY +L  FG  AYYHV E KL+PRAKK +F+G   G+KG+R+W P  K+ I SR+V F+
Sbjct: 632  ADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFD 691

Query: 541  ES----TMLKKVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXX 708
            ES    T++K     +     K+VEF+   V  +   + +                    
Sbjct: 692  ESPLLRTIVKPTTTSETGSLDKQVEFQ---VIQNESDLKEPEEEDQEPQTETDIPESMPS 748

Query: 709  XXXXSIATSKPKRNTKRPAR---LNDTVACASSIAAD---DVPTTYSEAVRDSESKKWRI 870
                SIA  +P+R   RP       D V  A  +A +     P+TY EA+  S+S+KW  
Sbjct: 749  DIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFA 808

Query: 871  AMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKE 1050
            AM +EM+SL KNQTW+L   P G+K I CKWV+ KKEG    + V+YKAR+VA+G+ Q+E
Sbjct: 809  AMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQRE 868

Query: 1051 GIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVA 1230
            G+DYNE+FSPVV+H+SIR+              +DVKTAFLHG+LEEEIYM QP+GF+V 
Sbjct: 869  GVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVP 928

Query: 1231 GKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLL 1410
            GKE+ VCKL KSLYGLKQSPRQWYKRFD +M+K  YTRS YD CVY  +L D SF+YL+L
Sbjct: 929  GKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVL 988

Query: 1411 YVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            YVDDMLIA++   +I+KLK  L +EFEMKDLG A+ ILGMEI
Sbjct: 989  YVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEI 1030


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  560 bits (1442), Expect = e-177
 Identities = 304/533 (57%), Positives = 362/533 (67%), Gaps = 21/533 (3%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            EVL  F ++K ++E QT +KIK  RTDNG E+ + +F +FC++EGIVRH TVR TPQQNG
Sbjct: 1021 EVLINFKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNG 1080

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRTLLE+ RCM SNAGLG+EFWAEAV  AC+LVNR PSTAI+ KTP E W G PA
Sbjct: 1081 VAERMNRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSPA 1140

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPE--TKKTIFSRDVT 534
             DY  L VFG  AY HV E KL PRAKK +F+G   G+KGYRLWCP+  + K I SRDVT
Sbjct: 1141 -DYSGLRVFGCPAYAHVNEGKLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVT 1199

Query: 535  FNESTMLKKV-NAKQLD--------GTPKKVEF--------ERTIVPDDRETVDDSXXXX 663
            F+ES+ML+   N+++ +        G  K+VE         E T V DD+  V DS    
Sbjct: 1200 FDESSMLRSTTNSREKEESDRMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDE 1259

Query: 664  XXXXXXXXXXXXXXXXXXXSIATSKPKRNTKRPARLNDTVACASSIAADD--VPTTYSEA 837
                               SIAT + KR  K   R  + V+ A S+A      P++Y+EA
Sbjct: 1260 SPQEKPY------------SIATGRTKRQIKPNPRYANLVSFALSVAESIGIEPSSYNEA 1307

Query: 838  VRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKA 1017
            V   ES +W IAMSEE++SL KN TWEL   P  +K +GCKWV+ KKEG    +  R+KA
Sbjct: 1308 VTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKWVFKKKEGILGVEATRFKA 1367

Query: 1018 RLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEI 1197
            RLVAKG+ QKEGIDYNEVFSPVVKHSSIR+              +DVKTAFLHG+LEE I
Sbjct: 1368 RLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETI 1427

Query: 1198 YMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKK 1377
            YM QPEGF V GKE  VC L KSLYGLKQSPRQWYKRFD FM++  YTR  YD CVY +K
Sbjct: 1428 YMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRK 1487

Query: 1378 LQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            L DGS +YLLLYVDDMLIAS+++ EI KLK++L  EFEMKDLG AK ILGM+I
Sbjct: 1488 LSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDI 1540


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  555 bits (1431), Expect = e-175
 Identities = 288/522 (55%), Positives = 346/522 (66%), Gaps = 10/522 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +   VF +WK M+E QT RK+K LRTDNG E+ +  F  +C+ EGIVRH+TV HTPQQNG
Sbjct: 742  QAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNG 801

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRT++ K RC+LSNAGL K+FWAEAV+ AC+L+NR PS AID KTP E W G PA
Sbjct: 802  VAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA 861

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             +Y  L VFG  AY HV   KL+PRA K +F+G  SG+KGY+LWCPETKK + SR+V F+
Sbjct: 862  -NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFH 920

Query: 541  ESTMLK---KVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXX 711
            ES ML      N          V+ E  I        +D                     
Sbjct: 921  ESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQS 980

Query: 712  XXXSIATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSEAVRDSESKKWRI 870
               SIA  +PKRN K P R  +        ++ A  I  +  P+TYSEA+   +  +W  
Sbjct: 981  PKRSIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWIT 1040

Query: 871  AMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKE 1050
            AM +EM+SLEKN TWEL  LPK KK I CKW++ +KEG  S D+ RYKARL+AKGY+Q  
Sbjct: 1041 AMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIP 1100

Query: 1051 GIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVA 1230
            GID+N+VFSPVVKHSSIR               MDVKTAFLHG+LEE+IYM QP+GF V 
Sbjct: 1101 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVP 1160

Query: 1231 GKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLL 1410
            GKE+ VC+L KSLYGLKQSPRQWYKRFD FM+  K+ RS YD CVYL K+ DGS +YLLL
Sbjct: 1161 GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLL 1219

Query: 1411 YVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            YVDDMLIA++   EI KLK +L SEFEMKDLG AK ILGMEI
Sbjct: 1220 YVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEI 1261


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  535 bits (1379), Expect = e-175
 Identities = 280/534 (52%), Positives = 342/534 (64%), Gaps = 22/534 (4%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +   VF +WK M+E QT +K+K LRTDNG E+ +  F  +C+ EGIV H+TV HTPQQNG
Sbjct: 570  QAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNG 629

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMN  ++ K RCMLSNA L K+FWAEAV+  C+L+NR PS A D KTP E W G PA
Sbjct: 630  VAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPA 689

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             +Y  L VFG  AY HV   KL+PRA K +F+G  SG+KGY+LWCPETKK + SR+V F+
Sbjct: 690  -NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFH 748

Query: 541  ESTMLK---------------KVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXX 675
            ES +L                 V  + L  +    E E   +  D   ++DS        
Sbjct: 749  ESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQS 808

Query: 676  XXXXXXXXXXXXXXXSIATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSE 834
                           SIA  KPKRN K P R  +        ++ A  I  +  P+TYSE
Sbjct: 809  SKR------------SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSE 856

Query: 835  AVRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYK 1014
            A+   +  +W  AM +EM+SL+KN TWE   LPK KK I CKW++ +KEG    D+ RYK
Sbjct: 857  AIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYK 916

Query: 1015 ARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEE 1194
            ARLVAKGY+Q  GID+N+VFSP++KHSSIR               MDVKTAFLHG+LEE+
Sbjct: 917  ARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEED 976

Query: 1195 IYMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLK 1374
            IYM QPEGF V GKE+ VC+L KSLYGLKQSPRQWYKRFD FM+  K+ RS YD CVYL 
Sbjct: 977  IYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 1035

Query: 1375 KLQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            K+ DGS +YLLLYVDDMLIA++   EI KLK +L SEF MKDLG AK ILGMEI
Sbjct: 1036 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEI 1089


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  535 bits (1379), Expect = e-174
 Identities = 280/534 (52%), Positives = 342/534 (64%), Gaps = 22/534 (4%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +   VF +WK M+E QT +K+K LRTDNG E+ +  F  +C+ EGIV H+TV HTPQQNG
Sbjct: 570  QAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNG 629

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMN  ++ K RCMLSNA L K+FWAEAV+  C+L+NR PS A D KTP E W G PA
Sbjct: 630  VAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPA 689

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             +Y  L VFG  AY HV   KL+PRA K +F+G  SG+KGY+LWCPETKK + SR+V F+
Sbjct: 690  -NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFH 748

Query: 541  ESTMLK---------------KVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXX 675
            ES +L                 V  + L  +    E E   +  D   ++DS        
Sbjct: 749  ESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQS 808

Query: 676  XXXXXXXXXXXXXXXSIATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSE 834
                           SIA  KPKRN K P R  +        ++ A  I  +  P+TYSE
Sbjct: 809  SKR------------SIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSE 856

Query: 835  AVRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYK 1014
            A+   +  +W  AM +EM+SL+KN TWE   LPK KK I CKW++ +KEG    D+ RYK
Sbjct: 857  AIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYK 916

Query: 1015 ARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEE 1194
            ARLVAKGY+Q  GID+N+VFSP++KHSSIR               MDVKTAFLHG+LEE+
Sbjct: 917  ARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEED 976

Query: 1195 IYMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLK 1374
            IYM QPEGF V GKE+ VC+L KSLYGLKQSPRQWYKRFD FM+  K+ RS YD CVYL 
Sbjct: 977  IYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 1035

Query: 1375 KLQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            K+ DGS +YLLLYVDDMLIA++   EI KLK +L SEF MKDLG AK ILGMEI
Sbjct: 1036 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEI 1089


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  521 bits (1341), Expect = e-172
 Identities = 278/530 (52%), Positives = 344/530 (64%), Gaps = 18/530 (3%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            E    F KWK ++ETQT +K+K LRTDNG E+    F +FC + GI RH T+   PQQNG
Sbjct: 224  ETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIARHKTIPGKPQQNG 283

Query: 181  VAERMNRTLLEKVRCMLSNAGLG--KEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGK 354
            VAER+NRT+LE+ RCMLSNAGL   +E W EA + AC+L+NR P ++++ K P E W G 
Sbjct: 284  VAERLNRTILERARCMLSNAGLWHQRELWVEAASTACYLINRSPHSSLNFKIPEEIWSGN 343

Query: 355  PATDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETK--KTIFSRD 528
            P  DY +L +FG  AY HV + KL PRA K +F+G  S  KGYRLWC E+K  + I SRD
Sbjct: 344  PI-DYSNLRIFGCPAYAHVNDGKLAPRAIKCIFLGYASESKGYRLWCSESKSRRLILSRD 402

Query: 529  VTFNESTMLKK--------VNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXX 684
            VTFNE  +L           +   L GT +KVE E   V  + +    S           
Sbjct: 403  VTFNEDALLSSGKQSSVSSSSTNNLQGTSEKVELELKSVAPNVDVPSSSTTESSIDDHGD 462

Query: 685  XXXXXXXXXXXXSIATSKPKRNTKRPARLNDT--VACASSIAA---DDV-PTTYSEAVRD 846
                        +IA  + +R  K PAR  D    A A SIA    DDV P +YSEAV  
Sbjct: 463  DHPIQQQEEY--NIARDRTRRQIKLPARYTDDNLTAYALSIAQEVNDDVEPASYSEAVSC 520

Query: 847  SESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLV 1026
             +S KW +AM+EE++SL KN TW LT LPKGK+ + CKW+Y KK+G P  +D R KARLV
Sbjct: 521  VDSAKWLVAMNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLV 580

Query: 1027 AKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMV 1206
             KG+ QKEGID+NE+FSPVV+H+SIRI              +DVKTAFLHG+LEEEIYM 
Sbjct: 581  VKGFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMD 640

Query: 1207 QPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQD 1386
            QPEGF V  KEH VC+L KSLYGLKQ+PRQWYK+FD FM+   Y+RSKYD C+Y ++  D
Sbjct: 641  QPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPD 700

Query: 1387 GSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            G+F+YLLLYVDDMLIAS+    I KLK +L +EFEMK+LG AK ILGMEI
Sbjct: 701  GTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEI 750


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  531 bits (1368), Expect = e-170
 Identities = 287/533 (53%), Positives = 352/533 (66%), Gaps = 21/533 (3%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            EV G F +WK M+E +T + +K LRTDNG E+ N  F +FC  EGIVRH TVRHTPQQNG
Sbjct: 634  EVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNG 693

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMN+TL+++ RCM  +AGL K+FWAEAV  A +LVNR PSTAID KTP E W GKP+
Sbjct: 694  VAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPS 753

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPE--TKKTIFSRDVT 534
             +Y  L +FG  AY HV + KL+PRA K +F+G  +G+KGYRLWC E  T K I SRDVT
Sbjct: 754  -NYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVT 812

Query: 535  FNESTML-KKVNAKQLDGTPK-------KVEFERTIVPDDRETVDDSXXXXXXXXXXXXX 690
            F+ES M  ++     L GT K       KVEFE  +       VDD+             
Sbjct: 813  FDESAMFGQRKEFGDLAGTSKTDLGANQKVEFE--VDAPMENGVDDTSEEQPVIDQNDSQ 870

Query: 691  XXXXXXXXXXSIATSKPKRNTKRPAR--------LNDTVACASSIAAD---DVPTTYSEA 837
                      SIA  +P+R  +RP R        + + VA A ++A +   + P +Y EA
Sbjct: 871  ----------SIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEA 920

Query: 838  VRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKA 1017
            +   +SKKW  +M +EM SL KNQTWEL  LP+G K + CKW++  K+G    +  +YK+
Sbjct: 921  MESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKS 980

Query: 1018 RLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEI 1197
            RLVAKG++QKEGIDYNEVFSPVVKH SIR+              +DVKTAFLHG+LEEEI
Sbjct: 981  RLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEI 1040

Query: 1198 YMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKK 1377
            YM QPEGF  + K   VC L KSLYGLKQSPRQWYKRFD FM+  ++ R++YD CVY K 
Sbjct: 1041 YMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKT 1100

Query: 1378 LQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            L DGSF+YLLLYVDDMLIA+++  EI KLK  L SEFEMKDLG AK ILGMEI
Sbjct: 1101 LPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEI 1153


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score =  513 bits (1322), Expect = e-167
 Identities = 275/515 (53%), Positives = 335/515 (65%), Gaps = 10/515 (1%)
 Frame = +1

Query: 22   KWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNGVAERMNR 201
            +WK M+E QT +++K LRTDNGGE+ +D F  +C  EGIVRH T+ +TPQQNGVAERMNR
Sbjct: 454  EWKVMIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNR 513

Query: 202  TLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPATDYDSLH 381
            T++ K RCMLSNA + K FWAEA   AC+L+NR PS  ++ KTP E W G PA DY  L 
Sbjct: 514  TIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMPA-DYSQLR 572

Query: 382  VFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFNESTMLKK 561
            VFG  AY HV   KL+PRA K LF+G  SG+KGY+LW PET KT  SR V FNES M   
Sbjct: 573  VFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRSVVFNESVMFN- 631

Query: 562  VNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXXXXXS--IATS 735
             ++   D  P   + E+  V    E VDD                           IA  
Sbjct: 632  -DSLPTDVIPGGSDEEQQYVSVQVEHVDDQETEIVGNDVNDTVQHSPPVLQPQDEPIAHR 690

Query: 736  KPKRNTKRPARLND-------TVACASSIAADDVPTTYSEAVRDSESKKWRIAMSEEMQS 894
            + KR+   P RL +         +CA  +     P TY+EAV   + +KW  AM EEMQS
Sbjct: 691  RTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQS 750

Query: 895  LEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDV-RYKARLVAKGYAQKEGIDYNEV 1071
            LEKN TWEL +LPK KK + CKW++ +K GF S  +  R+KARLVAKG++Q  G+DYN+V
Sbjct: 751  LEKNGTWELVHLPKQKKPVRCKWIFKEKGGFISPSEPPRFKARLVAKGFSQIAGVDYNDV 810

Query: 1072 FSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAGKEHEVC 1251
            FSPVVKHSSIR               +DVKTAFLHG+LEEEIYM QPEGF V GKE  VC
Sbjct: 811  FSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVC 870

Query: 1252 KLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLYVDDMLI 1431
            KL +SLYGLKQSPRQWYKRFD FM+   + RS++D CVY+ K  +GS +YLLLYVDDMLI
Sbjct: 871  KLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDMLI 929

Query: 1432 ASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            A++S ++I  LK +L SEF+MKDLG AK ILGMEI
Sbjct: 930  AAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEI 964


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  513 bits (1320), Expect = e-166
 Identities = 272/521 (52%), Positives = 334/521 (64%), Gaps = 9/521 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +    F +WK M+E QT +++K LRTDN GE+ +D F  +C  EGIVRH T+ +TPQQNG
Sbjct: 528  DTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNG 587

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRT++ K RCMLSNA + K FWAEA   AC+L+NR PS  ++ KTP E W G PA
Sbjct: 588  VAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMPA 647

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             DY  L VFG  AY HV   KL+PRA K LF+G   G+KGY+LW PET KT  SR V FN
Sbjct: 648  -DYSQLRVFGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLWNPETNKTFMSRSVVFN 706

Query: 541  ESTMLKKVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXXXXX 720
            ES M    ++   D  P   + E+  V    E VDD                        
Sbjct: 707  ESVMFN--DSLPTDVIPGGSDEEQQYVSVQVEHVDDQETEIVGNDVNDTVQHSPPVLQPQ 764

Query: 721  S--IATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSEAVRDSESKKWRIA 873
               IA  + KR+   P RL +         +CA  +     P TY+EAV   + +KW  A
Sbjct: 765  DEPIAHRRTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISA 824

Query: 874  MSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEG 1053
            M EEMQSLEKN TWEL +LPK KK + CKW++ +KEG    +  R+KARLVAKG++Q  G
Sbjct: 825  MQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVG 884

Query: 1054 IDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAG 1233
            +DYN+VFSPVVKHSSIR               +DVKTAFLHG+LEEEIYM QPEGF V G
Sbjct: 885  VDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPG 944

Query: 1234 KEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLY 1413
            KE  VCKL +SLYGLKQSPRQWYKRFD FM+   + RS++D CVY+ K  +GS +YLLLY
Sbjct: 945  KEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLY 1003

Query: 1414 VDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            VDD+LIA++S ++I  LK +L SEF+MKDLG AK ILGMEI
Sbjct: 1004 VDDILIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEI 1044


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  518 bits (1333), Expect = e-163
 Identities = 272/518 (52%), Positives = 346/518 (66%), Gaps = 11/518 (2%)
 Frame = +1

Query: 16   FIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNGVAERM 195
            F +WK ++E Q  RKIK+LRTDNG E+ +++F  FC+  GI RH TVRHTPQQNGVAERM
Sbjct: 1111 FKEWKILVENQIERKIKYLRTDNGLEFCSEEFNDFCKVHGIARHKTVRHTPQQNGVAERM 1170

Query: 196  NRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPATDYDS 375
            NRTLLEK RCML  A + K FWA+AV  A H+VNR P++AID KTP E W G+P+ +Y  
Sbjct: 1171 NRTLLEKARCMLLQAKMSKVFWAKAVHTASHIVNRSPASAIDFKTPNEVWSGEPS-NYSY 1229

Query: 376  LHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFNESTML 555
            L +FG   YYHV E KL+PR+KKA+F+G   G+KGY+LWC    K + SRDVTF+ES++L
Sbjct: 1230 LRIFGCPTYYHVNEGKLEPRSKKAIFVGYVDGVKGYKLWCLSLLKFVVSRDVTFDESSIL 1289

Query: 556  --KKVNAK-QLDGTPKKVEFERTIVPD-DRETVDDSXXXXXXXXXXXXXXXXXXXXXXXS 723
              +KV+ +   +   ++VE    +    D+ET  D                        +
Sbjct: 1290 DPRKVSMELSRNENNEQVELPVELTKKRDQETQSDESKDAEELASNEPY----------T 1339

Query: 724  IATSKPKRNTKRPARL---NDTVACASSIAADDV----PTTYSEAVRDSESKKWRIAMSE 882
            IA  + KR  ++P RL    + +A A   A +++    P++Y EA    ++ +W++AM E
Sbjct: 1340 IAKGRDKRRIRKPERLIEQENLIAQAFVAAEEEIKDLEPSSYIEATSCKDAAQWQLAMME 1399

Query: 883  EMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEGIDY 1062
            EM+SL +N+TW L   PKG + +GCKWVY KKEG P  +  R+KARLVAKG++QKEGIDY
Sbjct: 1400 EMESLHRNETWVLVKRPKGMRTVGCKWVYKKKEGIPEVEAARFKARLVAKGFSQKEGIDY 1459

Query: 1063 NEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAGKEH 1242
            NE+FSPVVKHSSIR+              +DVKTAFLHGDLEE IYM QPEGF   GKE 
Sbjct: 1460 NEIFSPVVKHSSIRVLLALVAQFDLELQQLDVKTAFLHGDLEETIYMDQPEGFLAEGKED 1519

Query: 1243 EVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLYVDD 1422
             VC+L KSLYGLKQSPRQWYKRFD FM    ++RS +D CVY KK+   S +YLLLYVDD
Sbjct: 1520 HVCQLKKSLYGLKQSPRQWYKRFDAFMTTHGFSRSAFDSCVYHKKMSGNSMIYLLLYVDD 1579

Query: 1423 MLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            MLIA+ ++ EI  LK  L  EF+MKDLG AK ILGMEI
Sbjct: 1580 MLIAANNITEINILKKLLSKEFDMKDLGVAKKILGMEI 1617


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
            Group]
 gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1322

 Score =  499 bits (1286), Expect = e-160
 Identities = 268/521 (51%), Positives = 331/521 (63%), Gaps = 9/521 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +    F + K M+E QT +++K L TDNGGE+ +D F  +C  EGIVRH T+ +TPQQNG
Sbjct: 528  DTFAAFKERKVMIERQTEKEVKVLCTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNG 587

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRT++ K RCMLSNA + K FWAEA   AC+L+NR PS  ++ KTP E W G PA
Sbjct: 588  VAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMPA 647

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             DY  L VFG  AY HV   KL+PRA K LF+G  SG+KGY+LW PET KT  SR+V FN
Sbjct: 648  -DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRNVIFN 706

Query: 541  ESTMLKKVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXXXXX 720
            E  M    ++   D  P   + E+  V    E VDD                        
Sbjct: 707  EFVMFN--DSLPTDVIPGGSDEEQQYVSVQVEHVDDQETEIVGNDVNDTVQHSPSVLQPQ 764

Query: 721  S--IATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSEAVRDSESKKWRIA 873
               IA  + KR+   P RL +         + A  +     P TY+EAV   + +KW  A
Sbjct: 765  DEPIAHRRTKRSCGAPVRLIEECDMVYYAFSYAEQVENTLEPATYTEAVVSGDREKWISA 824

Query: 874  MSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEG 1053
            + EEMQSLEKN TWEL +LPK KK + CKW++ +KEG    +  R+K RLVAKG++Q  G
Sbjct: 825  IQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAG 884

Query: 1054 IDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAG 1233
            +DYN+VFSPVVKHSSIR               +DVKT FLHG+LEEEIYM QPEGF V G
Sbjct: 885  VDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPG 944

Query: 1234 KEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLY 1413
            KE  VCKL +SLYGLKQSPRQWYKRFD FM+   + RS++D CVY+ K  +GS +YLLLY
Sbjct: 945  KEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLY 1003

Query: 1414 VDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            VDDMLIA++S ++I  LK +L SEF+MKDLG AK ILGMEI
Sbjct: 1004 VDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEI 1044


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score =  497 bits (1280), Expect = e-160
 Identities = 264/523 (50%), Positives = 332/523 (63%), Gaps = 11/523 (2%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            E  G F  WK ++ETQT RK+K LRTDNG E+ ND F +FC   GI RH TV  TPQQNG
Sbjct: 516  EAFGKFKDWKILVETQTERKVKKLRTDNGLEFCNDHFDQFCRKYGIARHRTVPGTPQQNG 575

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            + ERMNRTLL KVRCML ++G+ K FWAEAVT A +LVNR PSTAI  KTP E W GK  
Sbjct: 576  LVERMNRTLLNKVRCMLLSSGMPKRFWAEAVTTAAYLVNRSPSTAIGLKTPMEMWSGKKE 635

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPE--TKKTIFSRDVT 534
             +YD+L VFG+ AY HVK+ KL+PRA + + +G   G+KG++LW  +  + K   SRDV 
Sbjct: 636  -EYDNLRVFGTLAYAHVKQGKLEPRAVRGIILGYPEGVKGHKLWRIDDGSPKVFNSRDVV 694

Query: 535  -FNESTMLKKVNAKQLD--GTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXX 705
             F E    K V    ++  G   K + +  +  D  +  D+                   
Sbjct: 695  AFREDVYYKDVMGGSIEDAGFSNKEDVQIEVESDGMKNSDEEEMPESSSHGQSPGY---- 750

Query: 706  XXXXXSIATSKPKRNTKRPARLNDT------VACASSIAADDVPTTYSEAVRDSESKKWR 867
                 SIA  +P+R  K P R  D       V  A+ +     P TY+EA+   +S++W+
Sbjct: 751  -----SIAKERPRRQIKPPLRFRDEEDISAYVFMAAELEDSTEPLTYNEAIASEDSERWQ 805

Query: 868  IAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQK 1047
            +AM EEM SL KNQTW L + PKG+K + CKW++  KEG P  +  RYKARLVAKG+ Q+
Sbjct: 806  VAMQEEMDSLHKNQTWVLVDKPKGQKIVTCKWIFKLKEGIPGVEGPRYKARLVAKGFTQR 865

Query: 1048 EGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKV 1227
             GIDYNEVFSPVVKHSSIR+              +DVKTAFLHG L+EEI M QP+GF  
Sbjct: 866  AGIDYNEVFSPVVKHSSIRVILSLTAVMGMELEQLDVKTAFLHGYLDEEILMNQPQGFVK 925

Query: 1228 AGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLL 1407
             G+E +VC L +SLYGLKQSPRQWYKRFD++M+ + + RS YD CVY K+   G +VYLL
Sbjct: 926  KGEEDKVCLLKRSLYGLKQSPRQWYKRFDEYMVSNSFKRSSYDACVYFKEYCPGKYVYLL 985

Query: 1408 LYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            LYVDDML+A Q  +EI   K  L +EF+MK+LGEAK ILGMEI
Sbjct: 986  LYVDDMLVACQDSEEIRNTKDLLMAEFDMKELGEAKKILGMEI 1028


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  495 bits (1274), Expect = e-160
 Identities = 270/534 (50%), Positives = 328/534 (61%), Gaps = 22/534 (4%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +   VF +WK M+E QT RK+K LRTDNG ++ +  F  +C+ EGIVRH+TV HTPQQNG
Sbjct: 496  QAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNG 555

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRT++ K RCMLSNAGL K+FWAEAV+ AC+L+NR PS AID KTP + W G PA
Sbjct: 556  VAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPA 615

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDVTFN 540
             +Y  L VFG  AY HV  SKL+PRA K +F+G  SG+KGY+LWCPETKK + SR+V F+
Sbjct: 616  -NYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFH 674

Query: 541  ESTML---------------KKVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXX 675
            ES ML                 V  + L  +    E E   +  D   ++DS        
Sbjct: 675  ESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINLDAPVIEDS-------- 726

Query: 676  XXXXXXXXXXXXXXXSIATSKPKRNTKRPARLND-------TVACASSIAADDVPTTYSE 834
                           SIA  KPKRN K P R  +        ++ A  I  +  P+TYS+
Sbjct: 727  ----DSSIVQQSPKHSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSD 782

Query: 835  AVRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYK 1014
            A+   +  +W  AM +EM+SLEKN TWEL  LPK KK I CKW++ +KEG    D+ RYK
Sbjct: 783  AIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYK 842

Query: 1015 ARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEE 1194
            A                         SSIR               MDVKTAFLHG+LEE+
Sbjct: 843  A-------------------------SSIRTLLSIVAMYDYELEQMDVKTAFLHGELEED 877

Query: 1195 IYMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLK 1374
            IYM QPEGF V GKE+ VC+L KSLYGLKQSPRQWYKRFD FM+  K+ RS YD CVYL 
Sbjct: 878  IYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 936

Query: 1375 KLQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            K+ DGS +YLLLYV+DMLIA++   EI KLK +L SEFEMKDLG AK ILGMEI
Sbjct: 937  KVVDGSAIYLLLYVNDMLIAAKDKLEIAKLKAQLSSEFEMKDLGAAKKILGMEI 990


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  500 bits (1287), Expect = e-158
 Identities = 277/533 (51%), Positives = 340/533 (63%), Gaps = 21/533 (3%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            EV G F +WK M+E +T + +K LRTDNG E+ N  F +FC  EGIVRH TVRHTPQQNG
Sbjct: 847  EVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNG 906

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMN+TL+++ RCM  +AGL K+FWAEAV  A +LVNR PSTAID KTP E W GKP+
Sbjct: 907  VAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPS 966

Query: 361  TDYDSLHVFGSAAYYHVKESKLDPRAKKALFMGITSGIKGYRLWCPE--TKKTIFSRDVT 534
             +Y  L +FG  AY HV + KL+PRA K +F+G  +G+KGYRLWC E  T K I SRDVT
Sbjct: 967  -NYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTEDRTPKFIISRDVT 1025

Query: 535  FNESTML-KKVNAKQLDGTPK-------KVEFERTIVPDDRETVDDSXXXXXXXXXXXXX 690
            F+ES M  ++     L GT K       KVEFE  +       VDD+             
Sbjct: 1026 FDESAMFGQRKEFGDLAGTSKTDLGANQKVEFE--VDAPMENGVDDTSEEQPVIDQNDSQ 1083

Query: 691  XXXXXXXXXXSIATSKPKRNTKRPAR--------LNDTVACASSIAAD---DVPTTYSEA 837
                      SIA  +P+R  +RP R        + + VA A ++A +   + P +Y EA
Sbjct: 1084 ----------SIAAXRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGREEPRSYKEA 1133

Query: 838  VRDSESKKWRIAMSEEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKA 1017
            +   +SKKW  +M +EM SL KNQTWEL  LP+G K + CKW++  K+G    +  +YK+
Sbjct: 1134 MESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISEDEPPKYKS 1193

Query: 1018 RLVAKGYAQKEGIDYNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEI 1197
            RLVAK            VFSPVVKH SIR+              +DVKTAFLHG+LEEEI
Sbjct: 1194 RLVAK------------VFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEI 1241

Query: 1198 YMVQPEGFKVAGKEHEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKK 1377
            YM QPEGF  + K   VC L KSLYGLKQSPRQWYKRFD FM+  ++ R++YD CVY K 
Sbjct: 1242 YMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFKT 1301

Query: 1378 LQDGSFVYLLLYVDDMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            L DGSF+YLLLYVDDMLIA+++  EI KLK  L SEFEMKDLG AK ILGMEI
Sbjct: 1302 LPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEI 1354


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  486 bits (1251), Expect = e-155
 Identities = 256/519 (49%), Positives = 335/519 (64%), Gaps = 7/519 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +V  VF  +K  +E +T +KIK LRTDNGGEY + +F  FC+ EGIVR FTV HTPQQNG
Sbjct: 524  DVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNG 583

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRTLLE+ R ML  AG+ K FWAEAV  AC+++NR PSTAID KTP E W GKP 
Sbjct: 584  VAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKP- 642

Query: 361  TDYDSLHVFGSAAY--YHVKE-SKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDV 531
             DY SLHVFG   Y  Y+ +E +KLDP+++K +F+G    +KGYRLW P  +K + SRDV
Sbjct: 643  VDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV 702

Query: 532  TFNESTMLKKVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXX 711
             F E+ +  K   ++ D T K+      +  +++    DS                    
Sbjct: 703  VFAENELQSK---QKNDSTSKETAI---VQMEEKSKESDS--------SEAEPVHEEQEP 748

Query: 712  XXXSIATSKPKRNTKRPARLNDTVACASS----IAADDVPTTYSEAVRDSESKKWRIAMS 879
               +    +  R T++P+  +D V  +      I  +  P+T+ EA+  S++ +W  AM 
Sbjct: 749  DDVNNGVRRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAMH 808

Query: 880  EEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEGID 1059
            EEM++L +N+TWEL  LPKG+KAIG KWVY  K     Q + RY+ARLV KGYAQKEGID
Sbjct: 809  EEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVE-RYRARLVVKGYAQKEGID 867

Query: 1060 YNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAGKE 1239
            +NE+FSPVV+ ++IR+              +DVKTAFLHG+LEEEIYM+QPEGFK  GKE
Sbjct: 868  FNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKE 927

Query: 1240 HEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLYVD 1419
            + VC+L KSLYGLKQ+PR WYKRFD F++   Y+R   DHC Y K+     F+ LLLYVD
Sbjct: 928  NLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVD 987

Query: 1420 DMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            DML+   + D +++LK +L  EF+MKDLG A  ILGM+I
Sbjct: 988  DMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQI 1026


>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  483 bits (1244), Expect = e-155
 Identities = 254/519 (48%), Positives = 328/519 (63%), Gaps = 7/519 (1%)
 Frame = +1

Query: 1    EVLGVFIKWKKMMETQTCRKIKHLRTDNGGEYKNDQFTKFCEDEGIVRHFTVRHTPQQNG 180
            +V  VF ++K  +E  T ++IK LRTDNGGEY +  F  FC+ EGI R FTV HTPQQNG
Sbjct: 474  DVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNG 533

Query: 181  VAERMNRTLLEKVRCMLSNAGLGKEFWAEAVTYACHLVNRLPSTAIDGKTPFEKWYGKPA 360
            VAERMNRTLLE+ R ML  AGL K FWAEAV  AC+L+NR PSTAI  KTP E W GKP+
Sbjct: 534  VAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPS 593

Query: 361  TDYDSLHVFGSAAY--YHVKE-SKLDPRAKKALFMGITSGIKGYRLWCPETKKTIFSRDV 531
             +Y SLHVFG   Y  Y+ +E +KLDP+++K +F+G    +KGYRLW P  +K + SRDV
Sbjct: 594  -NYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDV 652

Query: 532  TFNESTMLKKVNAKQLDGTPKKVEFERTIVPDDRETVDDSXXXXXXXXXXXXXXXXXXXX 711
             F E+ + K+            VE       DD    +                      
Sbjct: 653  VFAETELQKEQENDSTIKDTSIVEIGGKSKEDDTSEAEQEHDEQEPNEDNDGD------- 705

Query: 712  XXXSIATSKPKRNTKRPARLNDTVACASS----IAADDVPTTYSEAVRDSESKKWRIAMS 879
                    +  R TK+P+  +D V  +      +  +  P+T+ EA+R S+  +W  AM 
Sbjct: 706  ------VRRTTRQTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMH 759

Query: 880  EEMQSLEKNQTWELTNLPKGKKAIGCKWVYAKKEGFPSQDDVRYKARLVAKGYAQKEGID 1059
            EE+++L +N+TWEL +LPKG+KAIGCKWVY  K     Q + RY+ARLV KGYAQKEGID
Sbjct: 760  EEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVE-RYRARLVVKGYAQKEGID 818

Query: 1060 YNEVFSPVVKHSSIRIXXXXXXXXXXXXXXMDVKTAFLHGDLEEEIYMVQPEGFKVAGKE 1239
            +NE+FSPVV+ ++IR+              +DVKTAFLHG+L+EEIYM+QPEGFK  GKE
Sbjct: 819  FNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKE 878

Query: 1240 HEVCKLHKSLYGLKQSPRQWYKRFDKFMMKSKYTRSKYDHCVYLKKLQDGSFVYLLLYVD 1419
            + VC+L KSLYGLKQ+PR WYKRFD F++   Y R   DHC Y  +  D  F+ LLLYVD
Sbjct: 879  NLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSSDHCTYYNRFDDNDFIILLLYVD 938

Query: 1420 DMLIASQSLDEIEKLKTRLKSEFEMKDLGEAKMILGMEI 1536
            DML+   + D+I++LK +L  EF+MKDLG A  ILGM+I
Sbjct: 939  DMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQI 977