BLASTX nr result

ID: Chrysanthemum21_contig00031885 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00031885
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021998252.1| protein CHROMATIN REMODELING 35-like [Helian...    81   4e-15
gb|OTG05512.1| putative SNF2-related, N-terminal domain-containi...    66   5e-10
gb|PLY85373.1| hypothetical protein LSAT_5X120421 [Lactuca sativa]     62   1e-08
ref|XP_023763947.1| protein CHROMATIN REMODELING 35-like [Lactuc...    62   1e-08
ref|XP_023769621.1| protein CHROMATIN REMODELING 35-like, partia...    62   2e-08
gb|PLY81016.1| hypothetical protein LSAT_9X107821 [Lactuca sativa]     62   2e-08
gb|KVI02017.1| Helicase, C-terminal [Cynara cardunculus var. sco...    62   2e-08

>ref|XP_021998252.1| protein CHROMATIN REMODELING 35-like [Helianthus annuus]
          Length = 932

 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
 Frame = +2

Query: 38  DKNRADNDGQVSLQKFSGG-DDSEGEASIVGGYTTTAAEPGVREDK--SIQDDVTVTGSD 208
           DK  AD DGQ S+QK SG   D EG+          + E  + ED   S +DDV  +  D
Sbjct: 176 DKKEADMDGQASMQKPSGRVGDVEGDVE--------SEEDKMEEDDVDSEEDDVG-SEED 226

Query: 209 KSIGDDDVEVENDKSVENDDFFVEKKHNKGVYVGVSEDYMDVEEGDSRSDVNFDGLADIW 388
           +    DDVE+E+  ++E DD  VE KH+KGVYVGV ED     E +S+SD N  G AD+W
Sbjct: 227 EMESSDDVEIEDGNNIEEDDVEVENKHDKGVYVGVEED-----ESNSQSDTNLYGEADLW 281


>gb|OTG05512.1| putative SNF2-related, N-terminal domain-containing protein
           [Helianthus annuus]
          Length = 765

 Score = 66.2 bits (160), Expect = 5e-10
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +2

Query: 164 EDKSIQDDVTVTGSDKSIGDDDVEVENDKSVENDDFFVEKKHNKGVYVGVSEDYMDVEEG 343
           +D   ++D   +  D+    DDVE+E+  ++E DD  VE KH+KGVYVGV ED     E 
Sbjct: 4   DDVDSEEDDVGSEEDEMESSDDVEIEDGNNIEEDDVEVENKHDKGVYVGVEED-----ES 58

Query: 344 DSRSDVNFDGLADIW 388
           +S+SD N  G AD+W
Sbjct: 59  NSQSDTNLYGEADLW 73


>gb|PLY85373.1| hypothetical protein LSAT_5X120421 [Lactuca sativa]
          Length = 949

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
 Frame = +2

Query: 17  DDMEVEKDKNRADNDGQVS------LQKFSGGDDSEGEASIVGGY--TTTAAEPGVREDK 172
           +D+E+ K  ++A ND  ++      +++  GGDD+  +A+  GG   T T   P V ++K
Sbjct: 179 EDIEL-KIPSKAYNDTLLNEPTEQPMEQLLGGDDALDQATKEGGDRDTLTVVVPSVEKEK 237

Query: 173 SIQDDVTVTGSDKSIGDDDVEVENDKSVENDDFFVEKKHNKGVYVGVSEDYMDVEEGDSR 352
           S +DD      D     DDV+  NDK  ++ D    KKH+KG YVGV +D     + D +
Sbjct: 238 SFKDD----DMDSEKKHDDVD--NDKKHDDVDSG-GKKHDKGKYVGVEDD-----DSDEQ 285

Query: 353 SDVNFDGLADIW 388
            + +FDGL DIW
Sbjct: 286 PEADFDGLGDIW 297


>ref|XP_023763947.1| protein CHROMATIN REMODELING 35-like [Lactuca sativa]
          Length = 955

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
 Frame = +2

Query: 17  DDMEVEKDKNRADNDGQVS------LQKFSGGDDSEGEASIVGGY--TTTAAEPGVREDK 172
           +D+E+ K  ++A ND  ++      +++  GGDD+  +A+  GG   T T   P V ++K
Sbjct: 185 EDIEL-KIPSKAYNDTLLNEPTEQPMEQLLGGDDALDQATKEGGDRDTLTVVVPSVEKEK 243

Query: 173 SIQDDVTVTGSDKSIGDDDVEVENDKSVENDDFFVEKKHNKGVYVGVSEDYMDVEEGDSR 352
           S +DD      D     DDV+  NDK  ++ D    KKH+KG YVGV +D     + D +
Sbjct: 244 SFKDD----DMDSEKKHDDVD--NDKKHDDVDSG-GKKHDKGKYVGVEDD-----DSDEQ 291

Query: 353 SDVNFDGLADIW 388
            + +FDGL DIW
Sbjct: 292 PEADFDGLGDIW 303


>ref|XP_023769621.1| protein CHROMATIN REMODELING 35-like, partial [Lactuca sativa]
          Length = 752

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
 Frame = +2

Query: 86  SGGDDSEGEASIVG-GYTTTAAEPGVREDKSIQDDVTVTGSDKSIGDD-DVEVENDKSVE 259
           +GG   +G     G G        GV E  +I D V  +  +K   +D DVEVE      
Sbjct: 4   NGGGGGKGRGRPRGKGKGGKGEREGVEEGNTITDIVVESKDEKEKNNDNDVEVE------ 57

Query: 260 NDDFFVEKKHNKGVYVGVSEDYMDVEEGDSRSDVNFDGLADIW 388
                 +KKH KGVYVGV  D  DVEE +S+S+ +FDGLADIW
Sbjct: 58  ------KKKHFKGVYVGVDSD-SDVEESNSQSEADFDGLADIW 93


>gb|PLY81016.1| hypothetical protein LSAT_9X107821 [Lactuca sativa]
          Length = 897

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
 Frame = +2

Query: 86  SGGDDSEGEASIVG-GYTTTAAEPGVREDKSIQDDVTVTGSDKSIGDD-DVEVENDKSVE 259
           +GG   +G     G G        GV E  +I D V  +  +K   +D DVEVE      
Sbjct: 133 NGGGGGKGRGRPRGKGKGGKGEREGVEEGNTITDIVVESKDEKEKNNDNDVEVE------ 186

Query: 260 NDDFFVEKKHNKGVYVGVSEDYMDVEEGDSRSDVNFDGLADIW 388
                 +KKH KGVYVGV  D  DVEE +S+S+ +FDGLADIW
Sbjct: 187 ------KKKHFKGVYVGVDSD-SDVEESNSQSEADFDGLADIW 222


>gb|KVI02017.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 1000

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = +2

Query: 227 DVEVENDKSVENDDFFVEKKHNKGVYVGVSEDYMDVEEGDSRSDVNFDGLADIW 388
           D +   DK+V   D  V++KH+KG YVGV  D  D+EE DS+SDVNFDGLADIW
Sbjct: 292 DSKDREDKNV-GSDVEVDRKHDKGEYVGVESD-SDMEESDSQSDVNFDGLADIW 343


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